Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P16_F_N15
(635 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_01_0907 + 7128397-7128497,7129944-7130022,7130470-7130568,713... 69 3e-12
05_05_0201 + 23206859-23206998,23207858-23207936,23208121-232082... 65 4e-11
02_02_0414 + 9972157-9972257,9972925-9973003,9973657-9973755,997... 63 2e-10
05_03_0582 - 15738503-15739301,15739385-15739642,15740585-157406... 62 3e-10
01_06_1193 - 35306608-35306777,35306869-35306890,35306988-353069... 62 3e-10
02_05_0402 + 28687597-28687671,28688123-28688235,28688927-286894... 62 4e-10
10_08_1044 + 22532596-22533114,22533425-22533688,22533926-22534306 56 2e-08
08_01_0063 + 439640-439740,440067-440145,440586-440684,440767-44... 42 3e-04
12_02_0912 - 24238659-24238897,24239353-24239462,24239548-242397... 30 1.3
06_02_0206 + 13005863-13005966,13006918-13007080,13008534-130086... 30 1.3
01_05_0351 + 21269339-21269527,21269758-21269961 29 4.1
01_07_0178 + 41810795-41811409 28 5.4
12_02_0735 - 22636835-22639502,22639755-22640734 28 7.1
06_01_1013 - 7931756-7935109 28 7.1
06_03_0930 - 26038341-26038508,26039114-26039254,26040799-260408... 27 9.4
02_03_0381 - 18339290-18339994,18340083-18340103,18341925-183419... 27 9.4
>01_01_0907 +
7128397-7128497,7129944-7130022,7130470-7130568,
7130654-7130767,7130960-7131102,7131716-7131797,
7132425-7132510,7132879-7133112,7134684-7135162,
7135309-7136027
Length = 711
Score = 68.9 bits (161), Expect = 3e-12
Identities = 31/87 (35%), Positives = 50/87 (57%)
Frame = +1
Query: 334 VERATSENNTSEEWGLIMEICDRAGASSTSAKECLRAVMRRLAHPDPHVQVHAATLLDAC 513
V+RATS+ +W MEICD +K+ ++A+ +R+ H +P VQ+ A TLL+
Sbjct: 6 VDRATSDMLIGPDWAKNMEICDICNRDPGQSKDVVKALKKRIGHKNPKVQILALTLLETA 65
Query: 514 VANXGRXFHLEVASRDFETEFRRLLSR 594
+ N G FH+ VA RD E +++ +
Sbjct: 66 IKNCGDIFHMHVAERDVLHEMVKIVKK 92
>05_05_0201 +
23206859-23206998,23207858-23207936,23208121-23208219,
23208561-23208674,23208762-23208910,23209010-23209091,
23209170-23209255,23209520-23209750,23209830-23210727
Length = 625
Score = 65.3 bits (152), Expect = 4e-11
Identities = 31/92 (33%), Positives = 46/92 (50%)
Frame = +1
Query: 319 PFDQDVERATSENNTSEEWGLIMEICDRAGASSTSAKECLRAVMRRLAHPDPHVQVHAAT 498
P V++ATS +W + +EICD A K+ ++AV +RL H DP VQ T
Sbjct: 14 PASTRVDKATSHLLQGPDWAINLEICDTLNADRWQTKDVVKAVKKRLQHKDPRVQFFTLT 73
Query: 499 LLDACVANXGRXFHLEVASRDFETEFRRLLSR 594
LL+ + N G H EV + E R++ +
Sbjct: 74 LLETMMKNCGEYVHFEVVEQHILQEMVRIVQK 105
>02_02_0414 +
9972157-9972257,9972925-9973003,9973657-9973755,
9973848-9973913,9974225-9974376,9974503-9974584,
9974696-9974781,9974919-9975098,9975320-9975717,
9976192-9976790,9977141-9977239
Length = 646
Score = 63.3 bits (147), Expect = 2e-10
Identities = 27/87 (31%), Positives = 51/87 (58%)
Frame = +1
Query: 334 VERATSENNTSEEWGLIMEICDRAGASSTSAKECLRAVMRRLAHPDPHVQVHAATLLDAC 513
V+RAT++ +W + +EICD AK+ ++++ +R+AH + VQ+ A TLL+
Sbjct: 6 VDRATNDMLIGPDWAMNLEICDTLNRDPGQAKDVVKSIKKRIAHRNAKVQLLALTLLETM 65
Query: 514 VANXGRXFHLEVASRDFETEFRRLLSR 594
+ N G H++VA +D E +++ +
Sbjct: 66 IKNCGDIVHMQVAEKDILHEMVKIVKK 92
>05_03_0582 -
15738503-15739301,15739385-15739642,15740585-15740670,
15740879-15740960,15741044-15741213,15742081-15742194,
15742984-15743082,15743171-15743249,15744604-15744710
Length = 597
Score = 62.5 bits (145), Expect = 3e-10
Identities = 30/87 (34%), Positives = 48/87 (55%)
Frame = +1
Query: 334 VERATSENNTSEEWGLIMEICDRAGASSTSAKECLRAVMRRLAHPDPHVQVHAATLLDAC 513
V++ATSE +W L ++ICD + AKE ++A+ +RL H + VQ A TLL+
Sbjct: 8 VDKATSELLLGPDWTLNIDICDAVNSDHGQAKEVIKALKKRLQHKNSKVQFFALTLLETL 67
Query: 514 VANXGRXFHLEVASRDFETEFRRLLSR 594
+ N G H +V RD E +++ +
Sbjct: 68 MKNCGDHVHSQVVERDILQEMIKIVKK 94
>01_06_1193 -
35306608-35306777,35306869-35306890,35306988-35306996,
35307107-35307115,35307470-35307491,35307981-35308784,
35308861-35309088,35309250-35309335,35309449-35309530,
35309630-35309778,35309992-35310105,35310961-35311059,
35311243-35311321,35311873-35312021
Length = 673
Score = 62.5 bits (145), Expect = 3e-10
Identities = 31/87 (35%), Positives = 48/87 (55%)
Frame = +1
Query: 334 VERATSENNTSEEWGLIMEICDRAGASSTSAKECLRAVMRRLAHPDPHVQVHAATLLDAC 513
VE+ATS +W + +EICD A K+ ++AV +RL + DP VQ +A TLL+
Sbjct: 22 VEKATSHLLMGPDWAVNLEICDIINADVWQTKDVVKAVKKRLQNKDPKVQFYALTLLETM 81
Query: 514 VANXGRXFHLEVASRDFETEFRRLLSR 594
+ N G LEVA + E +++ +
Sbjct: 82 MKNCGEYVQLEVAEQHVLQEMVKIIQK 108
>02_05_0402 +
28687597-28687671,28688123-28688235,28688927-28689432,
28689544-28689717,28689953-28690082,28692241-28692772,
28693578-28693823,28694648-28695061
Length = 729
Score = 62.1 bits (144), Expect = 4e-10
Identities = 38/110 (34%), Positives = 54/110 (49%)
Frame = +1
Query: 301 IFGTSSPFDQDVERATSENNTSEEWGLIMEICDRAGASSTSAKECLRAVMRRLAHPDPHV 480
IF +P D+ VE ATSEN +W +EICD ++ E +R + +R+ D V
Sbjct: 378 IFQGQTPADKIVEEATSENLDGPDWSANLEICDLINTEKVNSVELIRGIKKRIMLKDARV 437
Query: 481 QVHAATLLDACVANXGRXFHLEVASRDFETEFRRLLSRAQPPVAARLRAL 630
Q + LL+ V N + F EVA+ E RL+ Q V R +AL
Sbjct: 438 QYLSLVLLETIVKNCEKAFS-EVAAERVLDEMVRLIDDPQTVVNNRNKAL 486
>10_08_1044 + 22532596-22533114,22533425-22533688,22533926-22534306
Length = 387
Score = 56.4 bits (130), Expect = 2e-08
Identities = 33/102 (32%), Positives = 52/102 (50%)
Frame = +1
Query: 325 DQDVERATSENNTSEEWGLIMEICDRAGASSTSAKECLRAVMRRLAHPDPHVQVHAATLL 504
D+ V+ AT E + +W +EICD + ++ E +RA+ RR+ +P VQ A LL
Sbjct: 49 DKIVDEATLETMDAPDWATNLEICDMVNTGNVNSIELIRAIKRRIMLKNPRVQYLALVLL 108
Query: 505 DACVANXGRXFHLEVASRDFETEFRRLLSRAQPPVAARLRAL 630
+ V N + F E+A+ E +L+ Q V R +AL
Sbjct: 109 ETVVKNCEKAFS-EIAAERVLDEMVKLIDDPQTVVNNRNKAL 149
>08_01_0063 +
439640-439740,440067-440145,440586-440684,440767-440880,
441218-441381,442237-442312,442502-442587,442706-442861,
442934-443264
Length = 401
Score = 42.3 bits (95), Expect = 3e-04
Identities = 20/72 (27%), Positives = 35/72 (48%)
Frame = +1
Query: 334 VERATSENNTSEEWGLIMEICDRAGASSTSAKECLRAVMRRLAHPDPHVQVHAATLLDAC 513
V+ ATSE +W +EIC+ AK+ ++ + + L + Q++A LL+
Sbjct: 6 VKAATSEKLKEMDWAKNIEICELVAQDPGKAKDVIKPIKKYLGSRSKNTQLYAVMLLEML 65
Query: 514 VANXGRXFHLEV 549
+ N G H +V
Sbjct: 66 MNNCGEPIHKQV 77
>12_02_0912 -
24238659-24238897,24239353-24239462,24239548-24239741,
24239839-24239907,24240096-24240282,24240683-24240969,
24241593-24241880
Length = 457
Score = 30.3 bits (65), Expect = 1.3
Identities = 22/60 (36%), Positives = 28/60 (46%), Gaps = 3/60 (5%)
Frame = +2
Query: 383 SWRY--VIAPVHLLPVRRSVSVPSC-GAWRIPTHTYRFTPPHCSTPALQXVVVSSTWKSP 553
SW Y V + HL+ V S + WRIP T R PP C T ALQ + + + P
Sbjct: 207 SWLYGLVGSCAHLVMVNSSWTRSHIENIWRIPERTRRVYPP-CDTSALQMLPLERSTTPP 265
>06_02_0206 +
13005863-13005966,13006918-13007080,13008534-13008632,
13008704-13008817,13009094-13009254,13009746-13009827,
13009972-13010057,13011563-13011742,13011913-13012424,
13012844-13013478
Length = 711
Score = 30.3 bits (65), Expect = 1.3
Identities = 12/22 (54%), Positives = 16/22 (72%)
Frame = +1
Query: 334 VERATSENNTSEEWGLIMEICD 399
V+RATSE+ +W L +EICD
Sbjct: 7 VDRATSESLIGPDWSLNLEICD 28
>01_05_0351 + 21269339-21269527,21269758-21269961
Length = 130
Score = 28.7 bits (61), Expect = 4.1
Identities = 20/51 (39%), Positives = 24/51 (47%), Gaps = 1/51 (1%)
Frame = +3
Query: 414 FYQCEGVSPCRHAALGASRP-TRTGSRRHTARRLRCKXWSXLPPGSRLARL 563
FY C SPC AA S P +R G + R C+ LP + LARL
Sbjct: 18 FYSCGEASPCSLAASAPSCPASRLGLSKKLEARELCRAELKLP--TSLARL 66
>01_07_0178 + 41810795-41811409
Length = 204
Score = 28.3 bits (60), Expect = 5.4
Identities = 18/62 (29%), Positives = 30/62 (48%)
Frame = +1
Query: 343 ATSENNTSEEWGLIMEICDRAGASSTSAKECLRAVMRRLAHPDPHVQVHAATLLDACVAN 522
A+SE+ +S + L+ R+ + ++ L AV+RRL H +P + A A A
Sbjct: 56 ASSESESSSDDALMARSTPRSVLPAEISRRELEAVLRRLGHGEPDDEELDAVAAIAAEAE 115
Query: 523 XG 528
G
Sbjct: 116 AG 117
>12_02_0735 - 22636835-22639502,22639755-22640734
Length = 1215
Score = 27.9 bits (59), Expect = 7.1
Identities = 10/27 (37%), Positives = 17/27 (62%)
Frame = +2
Query: 293 KWGYLALPRLLIKMLNAQRVKITPARS 373
+W YL +P + I M+NA + + AR+
Sbjct: 1110 RWSYLMVPPVTIMMVNAVAIAVAAART 1136
>06_01_1013 - 7931756-7935109
Length = 1117
Score = 27.9 bits (59), Expect = 7.1
Identities = 17/50 (34%), Positives = 19/50 (38%), Gaps = 1/50 (2%)
Frame = +2
Query: 365 ARSGD*SWRYV-IAPVHLLPVRRSVSVPSCGAWRIPTHTYRFTPPHCSTP 511
A D SWR VH +P R CG R P + TP C P
Sbjct: 197 ASDPDSSWRCPGCQSVHAVPARELAYTCFCGRRREPPNDLFLTPHSCGEP 246
>06_03_0930 -
26038341-26038508,26039114-26039254,26040799-26040858,
26040972-26041034,26041444-26041454,26041722-26041802,
26042783-26043020,26043563-26043997
Length = 398
Score = 27.5 bits (58), Expect = 9.4
Identities = 13/28 (46%), Positives = 15/28 (53%)
Frame = -2
Query: 619 DERRQEAARETAGAGTRSRSLARRLPGG 536
+E +E A T G RSRS RR P G
Sbjct: 46 EEEEEELAWPTVARGKRSRSSRRRSPSG 73
>02_03_0381 -
18339290-18339994,18340083-18340103,18341925-18341982,
18342084-18342220,18342480-18342650
Length = 363
Score = 27.5 bits (58), Expect = 9.4
Identities = 18/60 (30%), Positives = 26/60 (43%), Gaps = 3/60 (5%)
Frame = +2
Query: 410 HLLPVRRSVSVP-SCGAWRIPTHTYRFTPPHCSTPAL--QXVVVSSTWKSPRETSRPSSG 580
HL+P +S + G+ P H + PP TP+ S W+SP + P SG
Sbjct: 131 HLIPNFACLSGSGNYGSGYPPPHQHHMAPPPIHTPSRLSHDSPGGSPWRSPMQFQAPMSG 190
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,871,050
Number of Sequences: 37544
Number of extensions: 298990
Number of successful extensions: 1042
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 1019
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1041
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1561213104
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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