Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P16_F_N12
(520 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
10_08_0951 - 21769342-21769752 127 6e-30
02_02_0470 - 10700092-10700505 126 1e-29
09_01_0103 - 1628763-1628879,1641827-1642921,1645126-1645476,164... 30 1.3
04_03_0540 + 16929782-16929834,16929937-16930032,16930111-169301... 29 1.7
01_06_1350 + 36505926-36505978,36506081-36506176,36506255-365063... 29 1.7
10_05_0026 + 8262237-8262899,8263300-8263509,8263599-8265480,826... 29 2.2
08_02_0167 - 13564466-13566227,13566361-13566644,13566684-135675... 29 2.2
08_01_0441 + 3890231-3890845,3891253-3894220,3906625-3906713,390... 29 2.2
10_02_0059 + 4785858-4786988 29 3.0
09_04_0061 - 14256767-14256845,14256862-14257224,14260846-14261555 29 3.0
09_02_0555 - 10588685-10592038 29 3.0
07_03_1512 + 27288779-27289222,27298101-27298399,27298499-272985... 29 3.0
06_02_0300 - 13993744-13994076,13994188-13994373,13994446-139953... 29 3.0
05_07_0282 + 28934359-28936458 29 3.0
03_02_1029 - 13488535-13493037 29 3.0
04_04_1192 + 31611804-31612113,31612235-31614058,31614098-316148... 28 3.9
11_06_0610 - 25449085-25453284 28 5.2
04_04_1327 + 32677408-32677460,32677563-32677658,32677737-326778... 27 6.8
03_05_0527 + 25220375-25221425,25221513-25222182,25222347-252224... 27 6.8
05_01_0351 + 2750253-2751042,2751951-2751958,2752122-2752149,275... 27 9.0
01_07_0277 + 42438359-42438811,42439194-42439817 27 9.0
01_01_0469 - 3456067-3456123,3456414-3456565,3456649-3456779,345... 27 9.0
>10_08_0951 - 21769342-21769752
Length = 136
Score = 127 bits (306), Expect = 6e-30
Identities = 57/128 (44%), Positives = 88/128 (68%), Gaps = 2/128 (1%)
Frame = +1
Query: 79 KSLLVLSGRXAGRKALVVKHXAAGXSDKPYGHAFVAGIDRYPRKVHKRMGKNKIHKRSKI 258
K++++L GR AGRKA++V+ G D+PYGH VAG+ +YP+KV ++ K K+S++
Sbjct: 9 KAVILLQGRFAGRKAVIVRVFEEGTRDRPYGHCLVAGLAKYPKKVIRKDSAKKTAKKSRV 68
Query: 259 KPFVKVVNYNHLMPTRYTVDFSFEKFSAKDLKDPAKRKKLRF--NTRVRFEERYKSGKNK 432
K F+K+VN+ HLMPTRYT+D ++ +A + KK+ + + R E+R+K+GKN+
Sbjct: 69 KCFLKLVNFTHLMPTRYTLDVDLKEVAAGPDALATRDKKVAACKSAKARLEDRFKTGKNR 128
Query: 433 WFFQKLRF 456
WFF KLRF
Sbjct: 129 WFFTKLRF 136
>02_02_0470 - 10700092-10700505
Length = 137
Score = 126 bits (303), Expect = 1e-29
Identities = 59/129 (45%), Positives = 88/129 (68%), Gaps = 3/129 (2%)
Frame = +1
Query: 79 KSLLVLSGRXAGRKALVVKHXAAGXSDKPYGHAFVAGIDRYPRKVHKRMGKNKIHKRSKI 258
K++++L GR AGRKA++V+ G D+PYGH VAG+ +YP+KV ++ K K+S++
Sbjct: 9 KAVILLQGRYAGRKAVIVRVFEEGTRDRPYGHCLVAGLAKYPKKVIRKDSAKKTAKKSRV 68
Query: 259 KPFVKVVNYNHLMPTRYTVDFSFEKFSAKDLKDPAKR-KKLRF--NTRVRFEERYKSGKN 429
K F+K+VN+ H+MPTRYT+D F+ ++ A R KK+ + R EER+K+GKN
Sbjct: 69 KCFLKLVNFTHIMPTRYTLDVDFKDVASGGPDALATRDKKVAACKAAKARLEERFKTGKN 128
Query: 430 KWFFQKLRF 456
+WFF KLRF
Sbjct: 129 RWFFTKLRF 137
>09_01_0103 -
1628763-1628879,1641827-1642921,1645126-1645476,
1645567-1645734
Length = 576
Score = 29.9 bits (64), Expect = 1.3
Identities = 14/27 (51%), Positives = 19/27 (70%)
Frame = -3
Query: 380 RSFLRLAGSFRSFALNFSKLKSTV*RV 300
RSFL LAG +R F NFSK+ ++ R+
Sbjct: 453 RSFLGLAGYYRRFIENFSKIAKSMTRL 479
>04_03_0540 +
16929782-16929834,16929937-16930032,16930111-16930185,
16930819-16930893,16930987-16931209,16931303-16931546,
16932111-16932568,16932647-16932928,16933032-16933733
Length = 735
Score = 29.5 bits (63), Expect = 1.7
Identities = 15/54 (27%), Positives = 25/54 (46%)
Frame = -2
Query: 369 TFSRVFQVFCAEFFKAEVNCITCWHQVIIVYNLDERLYLGPLVDFILSHPLVHF 208
TF + F + E + WH++I YNL++ +YL + D V+F
Sbjct: 298 TFKKAFHKVLTQTLTEE-EFVAAWHKLIRDYNLEKSVYLRHIWDIRRKWAFVYF 350
>01_06_1350 +
36505926-36505978,36506081-36506176,36506255-36506329,
36506964-36507038,36507132-36507348,36507442-36507685,
36508250-36508707,36508786-36509067,36509171-36509872
Length = 733
Score = 29.5 bits (63), Expect = 1.7
Identities = 15/54 (27%), Positives = 25/54 (46%)
Frame = -2
Query: 369 TFSRVFQVFCAEFFKAEVNCITCWHQVIIVYNLDERLYLGPLVDFILSHPLVHF 208
TF + F + E + WH++I YNL++ +YL + D V+F
Sbjct: 296 TFKKAFHKVLTQTLTEE-EFVAAWHKLIRDYNLEKSVYLRHIWDIRRKWAFVYF 348
>10_05_0026 + 8262237-8262899,8263300-8263509,8263599-8265480,
8265508-8265704,8275672-8275824
Length = 1034
Score = 29.1 bits (62), Expect = 2.2
Identities = 14/27 (51%), Positives = 18/27 (66%)
Frame = -3
Query: 380 RSFLRLAGSFRSFALNFSKLKSTV*RV 300
RSFL LAG +R F NFSK+ + R+
Sbjct: 954 RSFLGLAGYYRRFIENFSKIDKPMTRL 980
>08_02_0167 -
13564466-13566227,13566361-13566644,13566684-13567540,
13567684-13567957,13567973-13568218
Length = 1140
Score = 29.1 bits (62), Expect = 2.2
Identities = 13/20 (65%), Positives = 15/20 (75%)
Frame = -3
Query: 380 RSFLRLAGSFRSFALNFSKL 321
RSFL LAG +R F NFSK+
Sbjct: 505 RSFLGLAGYYRRFIKNFSKI 524
>08_01_0441 + 3890231-3890845,3891253-3894220,3906625-3906713,
3908317-3908337
Length = 1230
Score = 29.1 bits (62), Expect = 2.2
Identities = 14/27 (51%), Positives = 18/27 (66%)
Frame = -3
Query: 380 RSFLRLAGSFRSFALNFSKLKSTV*RV 300
RSFL LAG +R F NFSK+ + R+
Sbjct: 985 RSFLGLAGYYRRFIENFSKIAKPMTRL 1011
>10_02_0059 + 4785858-4786988
Length = 376
Score = 28.7 bits (61), Expect = 3.0
Identities = 13/20 (65%), Positives = 15/20 (75%)
Frame = -3
Query: 380 RSFLRLAGSFRSFALNFSKL 321
RSFL LAG +R F NFSK+
Sbjct: 224 RSFLGLAGYYRRFIENFSKI 243
>09_04_0061 - 14256767-14256845,14256862-14257224,14260846-14261555
Length = 383
Score = 28.7 bits (61), Expect = 3.0
Identities = 13/20 (65%), Positives = 15/20 (75%)
Frame = -3
Query: 380 RSFLRLAGSFRSFALNFSKL 321
RSFL LAG +R F NFSK+
Sbjct: 281 RSFLGLAGYYRRFIENFSKI 300
>09_02_0555 - 10588685-10592038
Length = 1117
Score = 28.7 bits (61), Expect = 3.0
Identities = 13/20 (65%), Positives = 15/20 (75%)
Frame = -3
Query: 380 RSFLRLAGSFRSFALNFSKL 321
RSFL LAG +R F NFSK+
Sbjct: 411 RSFLGLAGYYRRFIENFSKI 430
>07_03_1512 + 27288779-27289222,27298101-27298399,27298499-27298589,
27298701-27298766,27299151-27302660,27311604-27312224
Length = 1676
Score = 28.7 bits (61), Expect = 3.0
Identities = 13/20 (65%), Positives = 15/20 (75%)
Frame = -3
Query: 380 RSFLRLAGSFRSFALNFSKL 321
RSFL LAG +R F NFSK+
Sbjct: 1071 RSFLGLAGYYRRFIENFSKI 1090
>06_02_0300 -
13993744-13994076,13994188-13994373,13994446-13995363,
13995869-13996021
Length = 529
Score = 28.7 bits (61), Expect = 3.0
Identities = 11/27 (40%), Positives = 16/27 (59%)
Frame = +3
Query: 21 LSTRQGPLPPSLGKIMXPGQVVAGPQW 101
+ T GP P LGK++ PG+V +W
Sbjct: 3 MGTPSGPSPIFLGKLLWPGEVTITLRW 29
>05_07_0282 + 28934359-28936458
Length = 699
Score = 28.7 bits (61), Expect = 3.0
Identities = 28/83 (33%), Positives = 36/83 (43%), Gaps = 4/83 (4%)
Frame = +2
Query: 5 RPLLSLVNASRASPSKSGQNHAAGSSRCWSSVAGXRVARLSXSS-IXPQVPPTSHTGMPS 181
RPLL ++R+SP + AA + +C S + V RL SS I + G P
Sbjct: 594 RPLLDRSGSTRSSPPRKVAIAAAKAGKCRSGI----VTRLKPSSKITASSMSVTCAGPPQ 649
Query: 182 SLVSTGT---PGKCTRGWERIKS 241
S GT P R RIKS
Sbjct: 650 KSRSMGTVRPPPVVARRTPRIKS 672
>03_02_1029 - 13488535-13493037
Length = 1500
Score = 28.7 bits (61), Expect = 3.0
Identities = 13/20 (65%), Positives = 15/20 (75%)
Frame = -3
Query: 380 RSFLRLAGSFRSFALNFSKL 321
RSFL LAG +R F NFSK+
Sbjct: 794 RSFLGLAGYYRRFIENFSKI 813
>04_04_1192 + 31611804-31612113,31612235-31614058,31614098-31614842,
31615047-31616835,31617136-31617163,31617343-31617794
Length = 1715
Score = 28.3 bits (60), Expect = 3.9
Identities = 18/59 (30%), Positives = 28/59 (47%), Gaps = 4/59 (6%)
Frame = +1
Query: 190 IDRYPRKVHKRMGKNKIHKRSKIKPFVKVVNYNHLMPTRYTVDFSF----EKFSAKDLK 354
I Y R++ M ++ + K+K F +NY+H R T ++ E S KDLK
Sbjct: 919 IGTYNRELTSNMRILRMERCDKLKDFTLFLNYDHFRVERKTWQWTILPFEEMHSLKDLK 977
>11_06_0610 - 25449085-25453284
Length = 1399
Score = 27.9 bits (59), Expect = 5.2
Identities = 13/37 (35%), Positives = 18/37 (48%)
Frame = +2
Query: 143 PQVPPTSHTGMPSSLVSTGTPGKCTRGWERIKSTRGP 253
P +PPTSHT P+ T +P K + E+ P
Sbjct: 750 PPIPPTSHTSPPTPEEYTPSPPKSSPPEEKSPPPHSP 786
>04_04_1327 +
32677408-32677460,32677563-32677658,32677737-32677811,
32678446-32678520,32678615-32678837,32678931-32679174,
32679740-32680197,32680276-32680470,32680660-32681361
Length = 706
Score = 27.5 bits (58), Expect = 6.8
Identities = 15/54 (27%), Positives = 25/54 (46%)
Frame = -2
Query: 369 TFSRVFQVFCAEFFKAEVNCITCWHQVIIVYNLDERLYLGPLVDFILSHPLVHF 208
TF +VF + E + WH++I YNL++ + L + D V+F
Sbjct: 298 TFKKVFHKVLTQTLTEE-EFVAAWHKLIRDYNLEKSVNLRHIWDIRRKWAFVYF 350
>03_05_0527 +
25220375-25221425,25221513-25222182,25222347-25222440,
25222688-25222870
Length = 665
Score = 27.5 bits (58), Expect = 6.8
Identities = 12/20 (60%), Positives = 15/20 (75%)
Frame = -3
Query: 380 RSFLRLAGSFRSFALNFSKL 321
RSFL LAG +R F NFS++
Sbjct: 641 RSFLGLAGYYRRFIENFSRI 660
>05_01_0351 +
2750253-2751042,2751951-2751958,2752122-2752149,
2754692-2754775,2755780-2757548
Length = 892
Score = 27.1 bits (57), Expect = 9.0
Identities = 17/50 (34%), Positives = 22/50 (44%)
Frame = +1
Query: 112 GRKALVVKHXAAGXSDKPYGHAFVAGIDRYPRKVHKRMGKNKIHKRSKIK 261
G+K K AA D A VAG+ R P + + K K +KIK
Sbjct: 407 GQKPPAKKKPAARPGDTTAASAKVAGVKRAPSDRQEELATKKKAKLNKIK 456
>01_07_0277 + 42438359-42438811,42439194-42439817
Length = 358
Score = 27.1 bits (57), Expect = 9.0
Identities = 19/55 (34%), Positives = 27/55 (49%)
Frame = +1
Query: 31 VKGLSLQVWAKSCXRVKSLLVLSGRXAGRKALVVKHXAAGXSDKPYGHAFVAGID 195
V GLS + KSC + +S++ R A RK + + AAG + FV G D
Sbjct: 37 VSGLSFDFYRKSCPKAESVVRKFVRDAVRKDIGL---AAGLLRLHFHDCFVQGCD 88
>01_01_0469 -
3456067-3456123,3456414-3456565,3456649-3456779,
3456846-3458036,3458460-3458541,3458947-3458984,
3459091-3459250,3459356-3459557,3460245-3460329,
3460809-3460863,3461230-3461325,3461807-3461940,
3462031-3462043,3462315-3462419,3462935-3463121
Length = 895
Score = 27.1 bits (57), Expect = 9.0
Identities = 17/63 (26%), Positives = 24/63 (38%)
Frame = +1
Query: 205 RKVHKRMGKNKIHKRSKIKPFVKVVNYNHLMPTRYTVDFSFEKFSAKDLKDPAKRKKLRF 384
R H R+ N + S+ ++ N PT F + KD P +R R
Sbjct: 292 RSKHGRLDDNLTDENSERLWKMEPFNSEDRFPTPIVEQFDTRDYGFKDRYSPEQRTSTRT 351
Query: 385 NTR 393
NTR
Sbjct: 352 NTR 354
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,526,498
Number of Sequences: 37544
Number of extensions: 229691
Number of successful extensions: 873
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 846
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 870
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1130733700
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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