Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P16_F_N09
         (826 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.           25   0.73 
AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein ...    25   0.96 
AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory recept...    24   1.7  
AM295015-1|CAL25730.1|  549|Tribolium castaneum ecdysone recepto...    23   2.2  
AY321476-1|AAQ23386.1|  253|Tribolium castaneum Ash protein.           23   2.9  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    22   6.8  

>U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.
          Length = 425

 Score = 25.0 bits (52), Expect = 0.73
 Identities = 14/43 (32%), Positives = 20/43 (46%)
 Frame = -2

Query: 543 PSGFPAASPKLWYLLVFQ*TRWSSPENERPSTVCSEPSPLSAP 415
           PS   AA    W +        +SPE +    V  EP+PL++P
Sbjct: 56  PSTSAAADVDGWQVTPLPSDGTTSPEPDPEIPVAPEPAPLASP 98


>AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein
           protein.
          Length = 370

 Score = 24.6 bits (51), Expect = 0.96
 Identities = 11/19 (57%), Positives = 13/19 (68%)
 Frame = +1

Query: 502 QVPQLRGGGRKTRWTSRFR 558
           QVPQL GGGR+    +R R
Sbjct: 320 QVPQLAGGGRRGPGPARSR 338


>AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory receptor
           candidate 61 protein.
          Length = 670

 Score = 23.8 bits (49), Expect = 1.7
 Identities = 17/56 (30%), Positives = 27/56 (48%), Gaps = 3/56 (5%)
 Frame = -1

Query: 730 WCCQRPWVRPVSCLGW--*QLGRVEGLA-KCNFIAFVLHERQ*LYNFIELSVFRAN 572
           +C     +RP+S LGW    L R+  LA K  F     +E +   N++   + R+N
Sbjct: 555 YCYYSISIRPISTLGWFFWSLLRIYELARKAAFAHLNSNEARATLNWVSKLIIRSN 610


>AM295015-1|CAL25730.1|  549|Tribolium castaneum ecdysone receptor
           (isoform A) protein.
          Length = 549

 Score = 23.4 bits (48), Expect = 2.2
 Identities = 15/50 (30%), Positives = 17/50 (34%)
 Frame = -2

Query: 669 GSRGSQNVTLSPLCCTKGSNCTTLSSSRCFEPTINRTPKTASPSGFPAAS 520
           GS G      S L C      TTL+S        N  P     S  P +S
Sbjct: 41  GSNGLPAGAGSNLLCASNGLVTTLASGSSLNGLTNNVPSNGLSSSGPFSS 90



 Score = 21.8 bits (44), Expect = 6.8
 Identities = 7/32 (21%), Positives = 15/32 (46%)
 Frame = +2

Query: 287 NHPRSIVNPGYCWRVDENGYDSELKGGPLNND 382
           +HP ++++ GY   +    YD     G +  +
Sbjct: 125 SHPYTVISNGYSSPMSSGSYDPYSPNGKIGRE 156


>AY321476-1|AAQ23386.1|  253|Tribolium castaneum Ash protein.
          Length = 253

 Score = 23.0 bits (47), Expect = 2.9
 Identities = 16/50 (32%), Positives = 25/50 (50%), Gaps = 3/50 (6%)
 Frame = -2

Query: 600 LSSSRCFEPTINRTPKTASPSGFPAASP---KLWYLLVFQ*TRWSSPENE 460
           L +  C E + + TP  +S S F AAS     +++   F+     SPE+E
Sbjct: 191 LPTPTCSEASSSPTPSHSSESSFSAASSYTNTIYHQENFENYEPKSPEDE 240


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 21.8 bits (44), Expect = 6.8
 Identities = 9/23 (39%), Positives = 14/23 (60%)
 Frame = -1

Query: 184 LLYPCRRTVFTGISPFVVCHYHF 116
           LL+ C   +FT    F++C Y+F
Sbjct: 266 LLFCCAFIIFTMHLLFLLCIYYF 288


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 207,117
Number of Sequences: 336
Number of extensions: 5085
Number of successful extensions: 10
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 22621642
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)