Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P16_F_N07
(755 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_15670| Best HMM Match : OSCP (HMM E-Value=3.6e-06) 126 3e-29
SB_48397| Best HMM Match : TPR_2 (HMM E-Value=6.6e-26) 34 0.11
SB_254| Best HMM Match : 7tm_1 (HMM E-Value=1.7e-05) 33 0.25
SB_36344| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.58
SB_33433| Best HMM Match : Fasciclin (HMM E-Value=1.1e-09) 31 0.76
SB_27402| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.3
SB_13773| Best HMM Match : TolA (HMM E-Value=0.042) 30 1.8
SB_3733| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.8
SB_6680| Best HMM Match : Astacin (HMM E-Value=0) 29 3.1
SB_4814| Best HMM Match : NTP_transf_2 (HMM E-Value=0.6) 29 3.1
SB_8606| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.4
SB_153| Best HMM Match : Pox_TAA1 (HMM E-Value=5) 28 9.4
>SB_15670| Best HMM Match : OSCP (HMM E-Value=3.6e-06)
Length = 154
Score = 126 bits (303), Expect = 3e-29
Identities = 59/132 (44%), Positives = 88/132 (66%)
Frame = +1
Query: 109 SLSTSVASAQMVKPPVQVFGLEGRYASALFSAASKTKALDIVEKELGQFQQSIKTDAKLK 288
SLS++ ++A+ VKPP+Q+FG+EGRYA A++SAA+K+K L+ VE EL + +K +L
Sbjct: 23 SLSSTRSAAEFVKPPIQIFGIEGRYAHAVYSAAAKSKQLETVESELKNLESMMKKSERLS 82
Query: 289 EFIINPTLKRSMKVDALKHVANKISLSPTTGNLLGLLAENGRLDKLEAVINAFKIMMAAH 468
+FI+NPT+ ++ K L + S T NLL +AEN RL + +V NAF +M+A
Sbjct: 83 DFIVNPTMNKTKKQSGLTQLLKDQKFSDLTINLLSAMAENNRLGYINSVANAFSKIMSAA 142
Query: 469 RGEVTCEVVTAK 504
RGE+ C V +AK
Sbjct: 143 RGEIICSVTSAK 154
>SB_48397| Best HMM Match : TPR_2 (HMM E-Value=6.6e-26)
Length = 598
Score = 34.3 bits (75), Expect = 0.11
Identities = 27/93 (29%), Positives = 45/93 (48%)
Frame = +1
Query: 319 SMKVDALKHVANKISLSPTTGNLLGLLAENGRLDKLEAVINAFKIMMAAHRGEVTCEVVT 498
SM++ K ANK +++ GN+ + AE+G + E V + + +A + + CE+V+
Sbjct: 383 SMELRIAKKFANKTAMAYAYGNIANVHAESGNFAQAE-VNHEQHLKLAKNLNDRVCELVS 441
Query: 499 AKPLDQAQRQNLEAALKKFLKGNETLQLTAKVD 597
K R L+ K L ET AKV+
Sbjct: 442 IKQFGDMHR--LKCDYSKALDYYETHLSLAKVN 472
>SB_254| Best HMM Match : 7tm_1 (HMM E-Value=1.7e-05)
Length = 276
Score = 33.1 bits (72), Expect = 0.25
Identities = 17/55 (30%), Positives = 29/55 (52%)
Frame = -1
Query: 398 SNPSRLPVVGERLILLATCFNASTFMLLFNVGLMMNSLSFASVLIDC*NWPSSFS 234
SN RL ER I +A C + F+L F +++++++ ++C PS FS
Sbjct: 147 SNACRLAYQRERNITIAVCIILAVFLLTFFPAVLLSTVTVICTAVECSLNPSVFS 201
>SB_36344| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 146
Score = 31.9 bits (69), Expect = 0.58
Identities = 20/75 (26%), Positives = 35/75 (46%), Gaps = 4/75 (5%)
Frame = +1
Query: 472 GEVTCEVVTAKPLDQAQRQNLEAALKKF----LKGNETLQLTAKVDPSLIGGMVVSIGDK 639
GE++ V TA LD+ QNL+ F E+ ++ + D + + G + + K
Sbjct: 13 GELSASVSTAAVLDEVSSQNLKRTFTLFSEALTSSKESYEVMSANDENTL-GFTIDLYSK 71
Query: 640 YVDMSVXSKVKKYTE 684
Y+D + + KK E
Sbjct: 72 YMDSAKCEQAKKEAE 86
>SB_33433| Best HMM Match : Fasciclin (HMM E-Value=1.1e-09)
Length = 454
Score = 31.5 bits (68), Expect = 0.76
Identities = 24/80 (30%), Positives = 37/80 (46%)
Frame = +1
Query: 343 HVANKISLSPTTGNLLGLLAENGRLDKLEAVINAFKIMMAAHRGEVTCEVVTAKPLDQAQ 522
HV +++ + P++GNL+ L EN +L L V+N+ R V P + A
Sbjct: 113 HVIDRV-IFPSSGNLMSYLNENPQLSMLYEVLNS--------RNMTLSNVTLFAPSNAAL 163
Query: 523 RQNLEAALKKFLKGNETLQL 582
+ L K LK + LQL
Sbjct: 164 QSLPPGRLDKLLKNKQCLQL 183
>SB_27402| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 205
Score = 30.7 bits (66), Expect = 1.3
Identities = 14/59 (23%), Positives = 28/59 (47%)
Frame = +1
Query: 229 IVEKELGQFQQSIKTDAKLKEFIINPTLKRSMKVDALKHVANKISLSPTTGNLLGLLAE 405
I+EKE + + + + EF ++R ++V + KH A K G++ ++ E
Sbjct: 89 IIEKETVELEDKKENKSTTSEFTSELKIQRRVRVGSCKHPAKKADFETVFGDVANIIPE 147
>SB_13773| Best HMM Match : TolA (HMM E-Value=0.042)
Length = 1558
Score = 30.3 bits (65), Expect = 1.8
Identities = 16/36 (44%), Positives = 22/36 (61%)
Frame = +1
Query: 130 SAQMVKPPVQVFGLEGRYASALFSAASKTKALDIVE 237
SA + KPP Q GL+ R+ SA F+AA LD+ +
Sbjct: 460 SAAVTKPPAQTAGLQ-RHESAGFNAADILSNLDVTQ 494
>SB_3733| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1755
Score = 30.3 bits (65), Expect = 1.8
Identities = 23/76 (30%), Positives = 35/76 (46%), Gaps = 3/76 (3%)
Frame = +1
Query: 361 SLSPTTGNLLGLLAENGRLDKLEAVINAFKIMMAAHRGEVTCEVVTAKPL---DQAQRQN 531
SLS L LL GRLD+ +++ + G+ + E+ TA L + ++
Sbjct: 347 SLSRNLDELCCLLIRQGRLDEALSLLKKLITAKSEIHGDPSNELATAHQLMGSIRLKQAK 406
Query: 532 LEAALKKFLKGNETLQ 579
E ALK F+K LQ
Sbjct: 407 TEVALKHFMKAYTMLQ 422
>SB_6680| Best HMM Match : Astacin (HMM E-Value=0)
Length = 637
Score = 29.5 bits (63), Expect = 3.1
Identities = 18/60 (30%), Positives = 29/60 (48%)
Frame = +1
Query: 190 ALFSAASKTKALDIVEKELGQFQQSIKTDAKLKEFIINPTLKRSMKVDALKHVANKISLS 369
A+ + ++ K L E E F + + D+K + F NP MK+ +KH + SLS
Sbjct: 14 AVLAGLAQGKPLQSSEDE-NAFDKITQVDSKYEGFTSNPDYDGDMKLPPVKHSRTRRSLS 72
>SB_4814| Best HMM Match : NTP_transf_2 (HMM E-Value=0.6)
Length = 426
Score = 29.5 bits (63), Expect = 3.1
Identities = 16/48 (33%), Positives = 24/48 (50%)
Frame = -1
Query: 503 LAVTTSQVTSPRWAAIIILKALMTASSLSKRPFSASNPSRLPVVGERL 360
+ T+ T +W A+ KA+ + S K+ + RLP VGERL
Sbjct: 115 ILATSYANTKDQWRALGYKKAISSIKSYHKKIETEEECHRLPFVGERL 162
>SB_8606| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 571
Score = 27.9 bits (59), Expect = 9.4
Identities = 19/61 (31%), Positives = 28/61 (45%)
Frame = +1
Query: 40 LLTCANLFLNXIMSALKGXLLVRSLSTSVASAQMVKPPVQVFGLEGRYASALFSAASKTK 219
L+TC +++ L V LS+S+ ++ VKP V GR L+ A S K
Sbjct: 153 LVTCGSIYHGVCQLRDLNTLSVTELSSSITASSNVKPAVGFIAPGGR-DEVLYFATSWRK 211
Query: 220 A 222
A
Sbjct: 212 A 212
>SB_153| Best HMM Match : Pox_TAA1 (HMM E-Value=5)
Length = 139
Score = 27.9 bits (59), Expect = 9.4
Identities = 16/59 (27%), Positives = 28/59 (47%), Gaps = 1/59 (1%)
Frame = +1
Query: 262 SIKTDAKLKEFIINPTLKRSMKVDALKHVANKISLSPTTGNLLGLLA-ENGRLDKLEAV 435
+I+TD K ++++ + D + HVA + P G++ LA E + LE V
Sbjct: 14 NIQTDGKTSSYVLSNHINCMYSTDDINHVAYDNNQRPLRGDIRSFLAFEEEAKNALEGV 72
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,599,092
Number of Sequences: 59808
Number of extensions: 431342
Number of successful extensions: 1018
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 942
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1018
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 2058295707
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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