Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P16_F_N02
         (816 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292334-1|CAL23146.2|  390|Tribolium castaneum gustatory recept...    22   5.1  
AM292333-1|CAL23145.2|  316|Tribolium castaneum gustatory recept...    22   5.1  
AY337337-2|AAP94193.1|  491|Tribolium castaneum cytochrome P450 ...    22   6.7  
AF251548-1|AAF70178.1|  491|Tribolium castaneum cytochrome P450 ...    22   6.7  

>AM292334-1|CAL23146.2|  390|Tribolium castaneum gustatory receptor
           candidate 13 protein.
          Length = 390

 Score = 22.2 bits (45), Expect = 5.1
 Identities = 9/26 (34%), Positives = 16/26 (61%)
 Frame = +2

Query: 95  LKMEFVKCFFAMLILIVSLITVESTI 172
           L +++V C  A++ILI+    V S +
Sbjct: 292 LLLDYVSCVVALIILILQCGRVRSEV 317


>AM292333-1|CAL23145.2|  316|Tribolium castaneum gustatory receptor
           candidate 12 protein.
          Length = 316

 Score = 22.2 bits (45), Expect = 5.1
 Identities = 9/26 (34%), Positives = 16/26 (61%)
 Frame = +2

Query: 95  LKMEFVKCFFAMLILIVSLITVESTI 172
           L +++V C  A++ILI+    V S +
Sbjct: 218 LLLDYVSCVVALIILILQCGRVRSEV 243


>AY337337-2|AAP94193.1|  491|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 491

 Score = 21.8 bits (44), Expect = 6.7
 Identities = 7/12 (58%), Positives = 8/12 (66%)
 Frame = +2

Query: 503 RHPFCCVPFGFG 538
           RHPF  +PF  G
Sbjct: 420 RHPFAYIPFSAG 431


>AF251548-1|AAF70178.1|  491|Tribolium castaneum cytochrome P450
           monooxigenase CYP4Q4 protein.
          Length = 491

 Score = 21.8 bits (44), Expect = 6.7
 Identities = 7/12 (58%), Positives = 8/12 (66%)
 Frame = +2

Query: 503 RHPFCCVPFGFG 538
           RHPF  +PF  G
Sbjct: 420 RHPFAYIPFSAG 431


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 188,414
Number of Sequences: 336
Number of extensions: 4111
Number of successful extensions: 8
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 22310335
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)