Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P16_F_N02
         (816 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z26319-1|CAA81228.1|  464|Apis mellifera royal jelly protein RJP...    23   2.6  
DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450 monoo...    23   4.5  
EF013389-1|ABK54743.1|  172|Apis mellifera elongation factor 1-a...    22   7.8  
AY208278-1|AAO48970.1|  274|Apis mellifera elongation factor 1-a...    22   7.8  
AF015267-1|AAC38959.1|  461|Apis mellifera elongation factor-1al...    22   7.8  

>Z26319-1|CAA81228.1|  464|Apis mellifera royal jelly protein
           RJP57-2 protein.
          Length = 464

 Score = 23.4 bits (48), Expect = 2.6
 Identities = 12/29 (41%), Positives = 16/29 (55%)
 Frame = +3

Query: 645 VRERRCVLNIMNHMFVYHKNKIVNCIFDN 731
           VRE     N+ N + V HK K ++  FDN
Sbjct: 23  VRENSSGKNLTNTLNVIHKWKYLDYDFDN 51


>DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 499

 Score = 22.6 bits (46), Expect = 4.5
 Identities = 9/14 (64%), Positives = 10/14 (71%)
 Frame = +2

Query: 497 ASRHPFCCVPFGFG 538
           ASRHP   +PFG G
Sbjct: 427 ASRHPMHYLPFGDG 440


>EF013389-1|ABK54743.1|  172|Apis mellifera elongation factor
           1-alpha protein.
          Length = 172

 Score = 21.8 bits (44), Expect = 7.8
 Identities = 11/28 (39%), Positives = 16/28 (57%)
 Frame = +1

Query: 31  HVHTTLSVATK*PRFKGKSNQIKDGVCE 114
           H    L V++K P FKG + + K+G  E
Sbjct: 124 HGDNMLEVSSKMPWFKGWTVERKEGKVE 151


>AY208278-1|AAO48970.1|  274|Apis mellifera elongation factor
           1-alpha protein.
          Length = 274

 Score = 21.8 bits (44), Expect = 7.8
 Identities = 11/28 (39%), Positives = 16/28 (57%)
 Frame = +1

Query: 31  HVHTTLSVATK*PRFKGKSNQIKDGVCE 114
           H    L V++K P FKG + + K+G  E
Sbjct: 140 HGDNMLEVSSKMPWFKGWTVERKEGKVE 167


>AF015267-1|AAC38959.1|  461|Apis mellifera elongation factor-1alpha
           F2 protein.
          Length = 461

 Score = 21.8 bits (44), Expect = 7.8
 Identities = 11/28 (39%), Positives = 16/28 (57%)
 Frame = +1

Query: 31  HVHTTLSVATK*PRFKGKSNQIKDGVCE 114
           H    L V++K P FKG + + K+G  E
Sbjct: 197 HGDNMLEVSSKMPWFKGWTVERKEGKVE 224


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 223,498
Number of Sequences: 438
Number of extensions: 4980
Number of successful extensions: 9
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 25974678
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)