Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P16_F_M23
         (452 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q9UK41 Cluster: Vacuolar protein sorting-associated pro...    48   9e-05
UniRef50_Q86E08 Cluster: Clone ZZZ359 mRNA sequence; n=1; Schist...    39   0.044
UniRef50_Q9S9T7 Cluster: Vacuolar protein sorting-associated pro...    38   0.13 
UniRef50_A2WVR1 Cluster: Putative uncharacterized protein; n=3; ...    37   0.18 
UniRef50_Q9NA26 Cluster: Vacuolar protein sorting-associated pro...    34   1.2  
UniRef50_A7D018 Cluster: ATP-dependent exoDNAse (Exonuclease V) ...    33   3.8  
UniRef50_UPI0000DD7EDF Cluster: PREDICTED: hypothetical protein;...    31   8.7  

>UniRef50_Q9UK41 Cluster: Vacuolar protein sorting-associated
           protein 28 homolog; n=36; Eumetazoa|Rep: Vacuolar
           protein sorting-associated protein 28 homolog - Homo
           sapiens (Human)
          Length = 221

 Score = 48.0 bits (109), Expect = 9e-05
 Identities = 20/47 (42%), Positives = 27/47 (57%)
 Frame = +1

Query: 73  FEGKLKVQXWXXXXXXXXXXXXXXXAQVRQLVFDLETSYGAFNKFLH 213
           FEG+  V  W               +QVRQ++FDLE++Y AFN+FLH
Sbjct: 174 FEGRQTVSQWLQTLSGMSASDELDDSQVRQMLFDLESAYNAFNRFLH 220


>UniRef50_Q86E08 Cluster: Clone ZZZ359 mRNA sequence; n=1;
           Schistosoma japonicum|Rep: Clone ZZZ359 mRNA sequence -
           Schistosoma japonicum (Blood fluke)
          Length = 214

 Score = 39.1 bits (87), Expect = 0.044
 Identities = 17/43 (39%), Positives = 23/43 (53%)
 Frame = +1

Query: 73  FEGKLKVQXWXXXXXXXXXXXXXXXAQVRQLVFDLETSYGAFN 201
           FEGK +V+ W                + RQ++FDLE+SY AFN
Sbjct: 146 FEGKDRVKVWLDKMDQMKASDELSDTEARQMLFDLESSYNAFN 188


>UniRef50_Q9S9T7 Cluster: Vacuolar protein sorting-associated
           protein 28 homolog 1; n=4; Eukaryota|Rep: Vacuolar
           protein sorting-associated protein 28 homolog 1 -
           Arabidopsis thaliana (Mouse-ear cress)
          Length = 210

 Score = 37.5 bits (83), Expect = 0.13
 Identities = 19/48 (39%), Positives = 23/48 (47%)
 Frame = +1

Query: 73  FEGKLKVQXWXXXXXXXXXXXXXXXAQVRQLVFDLETSYGAFNKFLHK 216
           FEGK K++ W                Q RQL FDLE+SY +F   L K
Sbjct: 160 FEGKTKMKEWLSRLSKMGAADELTEQQSRQLHFDLESSYNSFMAALPK 207


>UniRef50_A2WVR1 Cluster: Putative uncharacterized protein; n=3;
           Oryza sativa|Rep: Putative uncharacterized protein -
           Oryza sativa subsp. indica (Rice)
          Length = 253

 Score = 37.1 bits (82), Expect = 0.18
 Identities = 17/42 (40%), Positives = 21/42 (50%)
 Frame = +1

Query: 73  FEGKLKVQXWXXXXXXXXXXXXXXXAQVRQLVFDLETSYGAF 198
           FEGK+KV  W                Q RQL FDL+++Y AF
Sbjct: 203 FEGKVKVSEWLAKLNKMGAGDELTEQQARQLNFDLDSAYSAF 244


>UniRef50_Q9NA26 Cluster: Vacuolar protein sorting-associated
           protein 28 homolog; n=2; Caenorhabditis|Rep: Vacuolar
           protein sorting-associated protein 28 homolog -
           Caenorhabditis elegans
          Length = 210

 Score = 34.3 bits (75), Expect = 1.2
 Identities = 14/43 (32%), Positives = 22/43 (51%)
 Frame = +1

Query: 88  KVQXWXXXXXXXXXXXXXXXAQVRQLVFDLETSYGAFNKFLHK 216
           KV+ W                  RQ++FD+E++Y AFNK L++
Sbjct: 165 KVKKWHDRLSSMAASDEISDEDARQMIFDVESAYQAFNKALNE 207


>UniRef50_A7D018 Cluster: ATP-dependent exoDNAse (Exonuclease V)
           beta subunit (Contains helicase and exonuclease
           domains)-like protein; n=1; Opitutaceae bacterium
           TAV2|Rep: ATP-dependent exoDNAse (Exonuclease V) beta
           subunit (Contains helicase and exonuclease domains)-like
           protein - Opitutaceae bacterium TAV2
          Length = 621

 Score = 32.7 bits (71), Expect = 3.8
 Identities = 9/19 (47%), Positives = 13/19 (68%)
 Frame = +2

Query: 134 MNCPKPKCDSWCSTWRPHM 190
           +N P+P C+ W   WRPH+
Sbjct: 31  LNLPEPTCERWTREWRPHI 49


>UniRef50_UPI0000DD7EDF Cluster: PREDICTED: hypothetical protein;
           n=1; Homo sapiens|Rep: PREDICTED: hypothetical protein -
           Homo sapiens
          Length = 213

 Score = 31.5 bits (68), Expect = 8.7
 Identities = 16/33 (48%), Positives = 17/33 (51%)
 Frame = -2

Query: 187 MRSPGRTPAVALGLRTVHPMLTXQITXLAXPAP 89
           +RSP R  A ALG RT HP  T   T    P P
Sbjct: 24  LRSPPRKKASALGTRTAHPAHTILSTPPLAPTP 56


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 318,433,355
Number of Sequences: 1657284
Number of extensions: 5323752
Number of successful extensions: 10785
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 10564
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10784
length of database: 575,637,011
effective HSP length: 94
effective length of database: 419,852,315
effective search space used: 23511729640
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)