Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P16_F_M23
         (452 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    21   4.1  
EF222290-1|ABN79650.1|  378|Tribolium castaneum adipokinetic hor...    21   5.4  
DQ422965-1|ABE02225.1|  378|Tribolium castaneum adipokinetic hor...    21   5.4  
AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxida...    21   5.4  
AY887136-1|AAW78361.1|  580|Tribolium castaneum vasa RNA helicas...    20   9.4  

>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
            adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 21.4 bits (43), Expect = 4.1
 Identities = 7/18 (38%), Positives = 11/18 (61%)
 Frame = -1

Query: 92   TLSFPSKAYREHAEPVHG 39
            +L+F  K +    EP+HG
Sbjct: 1411 SLTFKLKPHESDVEPIHG 1428


>EF222290-1|ABN79650.1|  378|Tribolium castaneum adipokinetic
           hormone receptor protein.
          Length = 378

 Score = 21.0 bits (42), Expect = 5.4
 Identities = 7/20 (35%), Positives = 12/20 (60%)
 Frame = -1

Query: 290 MCFVIQVFQQYSIYLIKVIL 231
           MC ++  F+ + +YL   IL
Sbjct: 125 MCRIMMFFRMFGLYLSSFIL 144


>DQ422965-1|ABE02225.1|  378|Tribolium castaneum adipokinetic
           hormone receptor protein.
          Length = 378

 Score = 21.0 bits (42), Expect = 5.4
 Identities = 7/20 (35%), Positives = 12/20 (60%)
 Frame = -1

Query: 290 MCFVIQVFQQYSIYLIKVIL 231
           MC ++  F+ + +YL   IL
Sbjct: 125 MCRIMMFFRMFGLYLSSFIL 144


>AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxidase
           subunit 2 protein.
          Length = 683

 Score = 21.0 bits (42), Expect = 5.4
 Identities = 9/26 (34%), Positives = 14/26 (53%)
 Frame = -2

Query: 190 HMRSPGRTPAVALGLRTVHPMLTXQI 113
           H R  GR   + LG+R V  +L+  +
Sbjct: 87  HRRIAGRLIDIFLGMRNVDDLLSVAV 112


>AY887136-1|AAW78361.1|  580|Tribolium castaneum vasa RNA helicase
           protein.
          Length = 580

 Score = 20.2 bits (40), Expect = 9.4
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = +1

Query: 10  FSLNFVXFAPPWTGSACS 63
           F LN++  A    GSAC+
Sbjct: 365 FLLNYIFIAVGIVGSACT 382


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 79,176
Number of Sequences: 336
Number of extensions: 1500
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used: 10301074
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)