Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P16_F_M23
         (452 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

01_06_0927 + 33082645-33083286                                         36   0.015
05_04_0083 + 17780665-17780764,17781070-17781124,17781193-177813...    33   0.14 
05_01_0321 + 2535201-2535260,2535366-2535700,2535705-2535849,253...    27   5.3  
05_07_0150 - 28035518-28036390                                         27   7.1  
02_01_0335 + 2386902-2386906,2386976-2387282,2387664-2387777,239...    27   7.1  

>01_06_0927 + 33082645-33083286
          Length = 213

 Score = 35.9 bits (79), Expect = 0.015
 Identities = 17/42 (40%), Positives = 21/42 (50%)
 Frame = +1

Query: 73  FEGKLKVQXWXXXXXXXXXXXXXXXAQVRQLVFDLETSYGAF 198
           FEGK+KV  W                Q RQL FDL+++Y AF
Sbjct: 163 FEGKVKVSEWLAKLNKMGAGDELTEQQARQLNFDLDSAYSAF 204


>05_04_0083 +
           17780665-17780764,17781070-17781124,17781193-17781313,
           17781361-17781429,17782047-17782274,17782477-17782666,
           17783303-17783694,17784380-17784427,17784816-17785400
          Length = 595

 Score = 32.7 bits (71), Expect = 0.14
 Identities = 13/32 (40%), Positives = 17/32 (53%), Gaps = 2/32 (6%)
 Frame = -3

Query: 93  HLEFPFKGIQGA--C*AGPWWREGHEVQAESC 4
           HL FPF     +  C  GPWW  GH+++   C
Sbjct: 17  HLLFPFYFFLPSLFCLQGPWWLTGHDLEGSGC 48


>05_01_0321 +
           2535201-2535260,2535366-2535700,2535705-2535849,
           2535946-2536140,2536243-2536530,2536849-2537035,
           2537260-2537306,2537704-2537796
          Length = 449

 Score = 27.5 bits (58), Expect = 5.3
 Identities = 12/27 (44%), Positives = 17/27 (62%)
 Frame = -2

Query: 181 SPGRTPAVALGLRTVHPMLTXQITXLA 101
           S GR+P    GLRT  P++T  IT ++
Sbjct: 51  STGRSPISYRGLRTQKPLITPDITIMS 77


>05_07_0150 - 28035518-28036390
          Length = 290

 Score = 27.1 bits (57), Expect = 7.1
 Identities = 13/34 (38%), Positives = 17/34 (50%)
 Frame = -2

Query: 193 PHMRSPGRTPAVALGLRTVHPMLTXQITXLAXPA 92
           P + SPG   A    LRT  P+L+  I+    PA
Sbjct: 58  PPLSSPGELAAALSHLRTADPLLSEVISSTGAPA 91


>02_01_0335 +
           2386902-2386906,2386976-2387282,2387664-2387777,
           2390252-2390320,2390416-2390715,2390829-2390930,
           2391085-2391279,2391377-2391664,2391942-2392128,
           2393168-2393272,2393778-2393824,2393982-2394074
          Length = 603

 Score = 27.1 bits (57), Expect = 7.1
 Identities = 12/27 (44%), Positives = 17/27 (62%)
 Frame = -2

Query: 181 SPGRTPAVALGLRTVHPMLTXQITXLA 101
           S GR+P + + LR   PMLT  IT ++
Sbjct: 196 STGRSPTLYMELRKEKPMLTPDITIMS 222


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,443,643
Number of Sequences: 37544
Number of extensions: 141845
Number of successful extensions: 241
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 241
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 241
length of database: 14,793,348
effective HSP length: 76
effective length of database: 11,940,004
effective search space used: 883560296
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)