Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P16_F_M22
         (623 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_P19351 Cluster: Troponin T, skeletal muscle; n=46; Panc...   143   4e-33
UniRef50_UPI0000D555FF Cluster: PREDICTED: similar to CG7107-PG,...   140   3e-32
UniRef50_Q6C251 Cluster: Similar to sp|P08640 Saccharomyces cere...    33   4.2  
UniRef50_UPI0000DA1A5E Cluster: PREDICTED: hypothetical protein;...    33   5.6  

>UniRef50_P19351 Cluster: Troponin T, skeletal muscle; n=46;
           Pancrustacea|Rep: Troponin T, skeletal muscle -
           Drosophila melanogaster (Fruit fly)
          Length = 397

 Score =  143 bits (346), Expect = 4e-33
 Identities = 77/141 (54%), Positives = 83/141 (58%), Gaps = 1/141 (0%)
 Frame = +1

Query: 202 PAPKQEGEGDPEFIKRQDQKRSDLDEQLKEYINEWRKQRAXXXXXXXXXXXXQAKRKVSX 381
           P    EGEGDPEFIKRQDQKRSDLD+QLKEYI EWRKQR+            QAKRKV+ 
Sbjct: 26  PQTPAEGEGDPEFIKRQDQKRSDLDDQLKEYITEWRKQRSKEEDELKKLKEKQAKRKVTR 85

Query: 382 XXXXXXXXXXXXXXXXXXXXXXXXXXXXDIEEKRQRLEEAXKKRQAMLQAMKDASKTGPN 561
                                       +IEEKR RLEEA KKRQAMLQAMKD  K GPN
Sbjct: 86  AEEEQKMAQRKKEEEERRVREAEEKKQREIEEKRMRLEEAEKKRQAMLQAMKDKDKKGPN 145

Query: 562 FTIQKKSEN-FGLSNAXLERN 621
           FTI KK     GLS+A +ERN
Sbjct: 146 FTIAKKDAGVLGLSSAAMERN 166


>UniRef50_UPI0000D555FF Cluster: PREDICTED: similar to CG7107-PG,
           isoform G isoform 3; n=1; Tribolium castaneum|Rep:
           PREDICTED: similar to CG7107-PG, isoform G isoform 3 -
           Tribolium castaneum
          Length = 352

 Score =  140 bits (338), Expect = 3e-32
 Identities = 76/142 (53%), Positives = 84/142 (59%), Gaps = 1/142 (0%)
 Frame = +1

Query: 199 TPAPKQEGEGDPEFIKRQDQKRSDLDEQLKEYINEWRKQRAXXXXXXXXXXXXQAKRKVS 378
           T    +EG GDPEFIKRQDQKRSDLDEQL+EYI EWRKQRA            QAKRK+S
Sbjct: 26  TTTKVEEGAGDPEFIKRQDQKRSDLDEQLREYITEWRKQRAKEEDELKKLKEKQAKRKIS 85

Query: 379 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXDIEEKRQRLEEAXKKRQAMLQAMKDASKT-G 555
                                        DIEEKRQRLEEA KKRQAM+QA+KD +K  G
Sbjct: 86  RAEEERKMAERKKQEEERRIREIEEKKQRDIEEKRQRLEEAEKKRQAMMQALKDQNKNKG 145

Query: 556 PNFTIQKKSENFGLSNAXLERN 621
           PNFTI K+  +  LS A LERN
Sbjct: 146 PNFTITKRDASSNLSAAQLERN 167


>UniRef50_Q6C251 Cluster: Similar to sp|P08640 Saccharomyces
           cerevisiae YIR019c STA1 extracellular alpha-1; n=1;
           Yarrowia lipolytica|Rep: Similar to sp|P08640
           Saccharomyces cerevisiae YIR019c STA1 extracellular
           alpha-1 - Yarrowia lipolytica (Candida lipolytica)
          Length = 251

 Score = 33.5 bits (73), Expect = 4.2
 Identities = 18/41 (43%), Positives = 23/41 (56%), Gaps = 2/41 (4%)
 Frame = +1

Query: 4   PADESRPGSPRTPHSNV--AVLPVQEPVPSD*VTDFYPCDT 120
           PA ES   SP  P ++V  AV+P   PVP   VT+  P +T
Sbjct: 137 PAPESSSESPIVPRTSVESAVVPESSPVPGSFVTESIPAET 177


>UniRef50_UPI0000DA1A5E Cluster: PREDICTED: hypothetical protein;
           n=1; Rattus norvegicus|Rep: PREDICTED: hypothetical
           protein - Rattus norvegicus
          Length = 114

 Score = 33.1 bits (72), Expect = 5.6
 Identities = 23/55 (41%), Positives = 29/55 (52%), Gaps = 2/55 (3%)
 Frame = -2

Query: 166 QSQNIPPRQTCWLFIECRTGRSRSLSHSALVLGPAAQRR--WNVESAAXRGGSHR 8
           +S+N   RQ CWLF E RTG+ R    ++L L P  QRR   +    A R G  R
Sbjct: 33  ESRNRKSRQFCWLFPE-RTGQ-RDYIKASLGLWPCLQRRPLQHTGGLAARAGRRR 85


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.316    0.131    0.380 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 452,809,226
Number of Sequences: 1657284
Number of extensions: 6984818
Number of successful extensions: 27251
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 25906
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 27221
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 45636850930
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)