Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P16_F_M18
(679 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC22F8.04 |||triose phosphate transporter |Schizosaccharomyces... 32 0.066
SPAPB1E7.04c |||chitinase |Schizosaccharomyces pombe|chr 1|||Manual 32 0.088
SPAC1399.04c |||uracil phosphoribosyltransferase |Schizosaccharo... 29 0.47
SPAC22H10.03c |kap114||karyopherin Kap14|Schizosaccharomyces pom... 27 1.9
SPCC24B10.02c |||NAD/NADH kinase|Schizosaccharomyces pombe|chr 3... 27 3.3
SPBC215.13 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||... 27 3.3
SPBP8B7.07c |set6||histone lysine methyltransferase Set6 |Schizo... 26 5.8
SPCC63.14 |||conserved fungal protein|Schizosaccharomyces pombe|... 26 5.8
SPBP4H10.07 |||ubiquitin-protein ligase E3 |Schizosaccharomyces ... 26 5.8
SPAC22F3.10c |gcs1|apd1|glutamate-cysteine ligase Gcs1 |Schizosa... 26 5.8
SPAC19B12.07c |||human ZNF277P homolog|Schizosaccharomyces pombe... 26 5.8
>SPAC22F8.04 |||triose phosphate transporter |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 383
Score = 32.3 bits (70), Expect = 0.066
Identities = 23/96 (23%), Positives = 44/96 (45%)
Frame = -2
Query: 669 ILTIPILMKDSLVCLQILIAQILMRDSSAYFQTLIIPILMKDSSAYFQILTIPILMKDSS 490
I+ P+LM + L+ ++ R SS +FQTL + ++ F + + I+ K
Sbjct: 113 IINAPLLMLSFQMAFTSLMVKMYWRFSSVHFQTLRLASAIQLKKFIF-VKILGIVSKTYC 171
Query: 489 VYFQSLMTRTMMKNNLVYFRILTILIQMKDSSAYFP 382
+ F + + + L+ F IL + +K + FP
Sbjct: 172 LAFVPVSFYQISRGLLLPFTILLSFVLLKQKTRLFP 207
Score = 30.3 bits (65), Expect = 0.27
Identities = 27/116 (23%), Positives = 50/116 (43%), Gaps = 1/116 (0%)
Frame = -2
Query: 633 VCLQILIAQILMRDSSAYFQTLIIPILMKDSSAYFQILTIPILMKDSSVYFQSL-MTRTM 457
V QI+ A ++ + + P+LM F L + + + SSV+FQ+L + +
Sbjct: 93 VSSQIVFAILVTILNKQALNIINAPLLMLSFQMAFTSLMVKMYWRFSSVHFQTLRLASAI 152
Query: 456 MKNNLVYFRILTILIQMKDSSAYFPSLMTRTMMRNNLVYFRILTILIQMKDSSAYF 289
++ +IL I+ K F + + R L+ F IL + +K + F
Sbjct: 153 QLKKFIFVKILGIV--SKTYCLAFVPVSFYQISRGLLLPFTILLSFVLLKQKTRLF 206
>SPAPB1E7.04c |||chitinase |Schizosaccharomyces pombe|chr 1|||Manual
Length = 1236
Score = 31.9 bits (69), Expect = 0.088
Identities = 46/175 (26%), Positives = 77/175 (44%), Gaps = 5/175 (2%)
Frame = -2
Query: 651 LMKDSLVCLQILIAQILMRDSSAYFQTLIIPI--LMKDSSAYFQILTIPILMKDSSVYFQ 478
++ S L I+ I + S + + + +IP + SS+ + + P+ SS
Sbjct: 642 IISGSSSILSSSISTIPISSSLSTYSSSVIPSSSTLVSSSSSLIVSSSPVASSSSSPIPS 701
Query: 477 S---LMTRTMMKNNLVYFRILTILIQMKDSSAYFPSLMTRTMMRNNLVYFRILTILIQMK 307
S + T + +N+ + + L M SSA S+ + T++ + T+L +
Sbjct: 702 SSSLVSTYSASLSNITHSSLS--LTAMSSSSAIPTSVNSSTLITASSSN----TLLSSIT 755
Query: 306 DSSAYFRNCSSTTVSNYDSQNCSSTTVSNYDSHNYSKMAYNLTLSHNSFHRMRNS 142
SSA SSTTVSN S S+T S N S +A +L LS +S + S
Sbjct: 756 SSSAIV---SSTTVSNISSNLPSATASSQSQLTNSSTLATSLYLSSSSSRTISTS 807
>SPAC1399.04c |||uracil phosphoribosyltransferase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 220
Score = 29.5 bits (63), Expect = 0.47
Identities = 19/79 (24%), Positives = 39/79 (49%), Gaps = 2/79 (2%)
Frame = -2
Query: 606 ILMRDSSAYFQTLIIPILMKDSSAYFQILTIPILMKDSSVY--FQSLMTRTMMKNNLVYF 433
++ RD + + L+ L KD+ +L P+L +SV Q+L+ + + + N+V+
Sbjct: 110 LVQRDETTFEAKLMFCKLPKDAQDRLVLLLDPLLATGNSVILAIQTLINKGIPEENIVFV 169
Query: 432 RILTILIQMKDSSAYFPSL 376
++ + + A FP L
Sbjct: 170 NLIACNEGITNVFAKFPKL 188
>SPAC22H10.03c |kap114||karyopherin Kap14|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 986
Score = 27.5 bits (58), Expect = 1.9
Identities = 26/109 (23%), Positives = 47/109 (43%), Gaps = 7/109 (6%)
Frame = -2
Query: 648 MKDSLVCLQILIAQILMRDSSAYFQTLII---PILMKDSSAYFQILTIPILMKDSSVYFQ 478
M D L I ++ + + + Q++I +++KDS LT +L + F+
Sbjct: 752 MVDLQSILLSCIKRLAIAEQPRFIQSIIYVFAKLIVKDSLGMMHFLTSSLLNEQGLTAFE 811
Query: 477 SLMTRTMMKNNLVYF----RILTILIQMKDSSAYFPSLMTRTMMRNNLV 343
LM T+ +N VYF I I I M ++ L+ ++ L+
Sbjct: 812 VLM--TVWCDNFVYFSNFKNISIICIAMTKIYSFDSPLLDSVQVKGELI 858
>SPCC24B10.02c |||NAD/NADH kinase|Schizosaccharomyces pombe|chr
3|||Manual
Length = 449
Score = 26.6 bits (56), Expect = 3.3
Identities = 13/34 (38%), Positives = 20/34 (58%)
Frame = -2
Query: 231 TVSNYDSHNYSKMAYNLTLSHNSFHRMRNSFHYY 130
++SNY H Y + N++L S R++ SFH Y
Sbjct: 217 SLSNYQQHLYQVLTQNVSLRFCS--RLQCSFHKY 248
>SPBC215.13 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 534
Score = 26.6 bits (56), Expect = 3.3
Identities = 17/54 (31%), Positives = 29/54 (53%), Gaps = 1/54 (1%)
Frame = -2
Query: 321 LIQMKDSSAYFRNCSSTTVSNYDSQNCSST-TVSNYDSHNYSKMAYNLTLSHNS 163
+I SS+ +S+T+S+ S + S T T S S + S +++ TLS +S
Sbjct: 272 IISSSSSSSSSPTSTSSTISSSSSSSSSPTSTSSTISSSSSSSSSFSSTLSSSS 325
>SPBP8B7.07c |set6||histone lysine methyltransferase Set6
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 483
Score = 25.8 bits (54), Expect = 5.8
Identities = 17/71 (23%), Positives = 31/71 (43%), Gaps = 3/71 (4%)
Frame = -2
Query: 399 SSAYFPSLMTRTMMRNNLVYFRILT---ILIQMKDSSAYFRNCSSTTVSNYDSQNCSSTT 229
+S P T+ +N+ +I+ + I DS+ R CS+ T +Q C++
Sbjct: 7 ASVILPEFGKGTVATDNIPIGKIIIRKRVDILSLDSANLTRTCSTCTEEKVKTQRCAACK 66
Query: 228 VSNYDSHNYSK 196
+ +Y S K
Sbjct: 67 IIHYCSKGCQK 77
>SPCC63.14 |||conserved fungal protein|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1184
Score = 25.8 bits (54), Expect = 5.8
Identities = 16/39 (41%), Positives = 19/39 (48%)
Frame = -2
Query: 279 SSTTVSNYDSQNCSSTTVSNYDSHNYSKMAYNLTLSHNS 163
SS S Y S++ STT N S AYN L H+S
Sbjct: 402 SSVNGSVYRSKSVKSTTSHNKVPERNSVPAYNEKLMHSS 440
>SPBP4H10.07 |||ubiquitin-protein ligase E3 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 583
Score = 25.8 bits (54), Expect = 5.8
Identities = 14/49 (28%), Positives = 23/49 (46%)
Frame = -2
Query: 291 FRNCSSTTVSNYDSQNCSSTTVSNYDSHNYSKMAYNLTLSHNSFHRMRN 145
FR+ S + N ++QN ST SN++ N S H S + + +
Sbjct: 144 FRS-SIAALRNLNTQNNQSTLASNHEDENVSSSGGQEMQDHGSVNNLES 191
>SPAC22F3.10c |gcs1|apd1|glutamate-cysteine ligase Gcs1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 669
Score = 25.8 bits (54), Expect = 5.8
Identities = 16/57 (28%), Positives = 26/57 (45%), Gaps = 2/57 (3%)
Frame = +1
Query: 277 RAVPEVSRAILHLDQDCQDPEVNQVIPHHGSGHQAREVSR--AILHLDQDCQDPEVN 441
R +PE + + ++QDC D + I + H A SR ++ D QD V+
Sbjct: 395 RNLPEYNDVPVVINQDCYDKLIKDCIDERLAKHMAHIFSRDPLVIFSDSILQDNSVS 451
>SPAC19B12.07c |||human ZNF277P homolog|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 319
Score = 25.8 bits (54), Expect = 5.8
Identities = 19/92 (20%), Positives = 41/92 (44%)
Frame = -2
Query: 435 FRILTILIQMKDSSAYFPSLMTRTMMRNNLVYFRILTILIQMKDSSAYFRNCSSTTVSNY 256
F + + I + D+ Y L+ + ++N L FR L + K+ + ++
Sbjct: 116 FHVHGLNIGLADNIVYINRLLEK--IKNELESFRCLCCHVPCKNKKLLREHMNNKRHFRL 173
Query: 255 DSQNCSSTTVSNYDSHNYSKMAYNLTLSHNSF 160
D + S+ + NY+ + ++T+SH+ F
Sbjct: 174 DPK---SSEYDEFYIINYASVTKSITISHSQF 202
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,821,006
Number of Sequences: 5004
Number of extensions: 31820
Number of successful extensions: 126
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 109
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 125
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 311890690
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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