Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P16_F_M17
(810 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC1020.07 |||haloacid dehalogenase-like hydrolase|Schizosaccha... 119 6e-28
SPAC4C5.01 |||haloacid dehalogenase-like hydrolase |Schizosaccha... 85 1e-17
SPBC21C3.20c |git1||C2 domain protein Git1|Schizosaccharomyces p... 31 0.15
SPAC1002.03c |gls2||glucosidase II Gls2|Schizosaccharomyces pomb... 29 0.78
SPAC22F3.09c |res2|mcs1, pct1|MBF transcription factor complex s... 28 1.4
SPBC17D1.07c |||GTPase regulator |Schizosaccharomyces pombe|chr ... 28 1.4
SPAC18G6.10 |||chromosome segregation protein |Schizosaccharomyc... 27 2.4
SPAC821.13c ||SPAC955.01c|P-type ATPase |Schizosaccharomyces pom... 27 3.2
SPBC725.16 |res1|sct1|MBF transcription factor complex subunit R... 27 4.2
SPAC57A7.11 |mip1||WD repeat protein Mip1|Schizosaccharomyces po... 27 4.2
SPAPB24D3.10c |agl1|agl|alpha-glucosidase Agl1|Schizosaccharomyc... 27 4.2
SPAC323.06c |uba5||NEDD8 activating enzyme |Schizosaccharomyces ... 26 7.3
SPCC132.01c ||SPCC1322.17c|DUF814 family protein|Schizosaccharom... 25 9.6
SPBC1826.01c |mot1||TATA-binding protein associated factor Mot1|... 25 9.6
>SPCC1020.07 |||haloacid dehalogenase-like
hydrolase|Schizosaccharomyces pombe|chr 3|||Manual
Length = 236
Score = 119 bits (286), Expect = 6e-28
Identities = 67/177 (37%), Positives = 100/177 (56%), Gaps = 11/177 (6%)
Frame = +2
Query: 245 LFDMDGLILNTEDLYTVGFQKVASRYGK-KFTFELKSRIMGQQTREFAGNIIKYLDLPLT 421
LFDMDGL+++TE +YT + RY K F+ E+K+++MG+ ++E + + + + LT
Sbjct: 7 LFDMDGLLVDTESIYTKSTNIILKRYNKGPFSMEVKAKMMGRTSKEASRIFLDWSGIDLT 66
Query: 422 IEDFVSETRQIFEELFPQSEILPGVKKLIYHLNQHNIPMGLATSSSKESYELKTLKHQDL 601
E++++ R+ EL+ ++ LPGV L+ L NIP+ LATSS ++E K+ L
Sbjct: 67 CEEYIALQRETQAELWRHTKPLPGVMNLLSKLKSLNIPIALATSSDTHNFEKKSAHLSHL 126
Query: 602 FDLFSHKTLGSSDP--DVKRGKPHPDIFIVAANKFLDKPDL--------EKCLVFED 742
FD F + DP V RGKPHPDI+ +A DK E CLVFED
Sbjct: 127 FDHFDGNIITGDDPRLPVGRGKPHPDIWFIALKMINDKRKAQGQAEILPENCLVFED 183
Score = 33.5 bits (73), Expect = 0.036
Identities = 15/23 (65%), Positives = 18/23 (78%)
Frame = +1
Query: 733 FRRSINGVKAARAAGMQVVMVPD 801
F SI GV++ RAAGM+VV VPD
Sbjct: 181 FEDSITGVQSGRAAGMKVVWVPD 203
>SPAC4C5.01 |||haloacid dehalogenase-like hydrolase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 246
Score = 84.6 bits (200), Expect = 1e-17
Identities = 47/153 (30%), Positives = 83/153 (54%), Gaps = 3/153 (1%)
Frame = +2
Query: 245 LFDMDGLILNTEDLYTVGFQKVASRYGKK-FTFELKSRIMGQQTREFAGNIIKYLDLPLT 421
LFDMDGL++++E +YT + RYGK +K+++MG+ A +I + ++P+T
Sbjct: 12 LFDMDGLLVDSETIYTKTTNLILDRYGKDPLPISVKAQMMGRPGSAAAKVVIDWSNIPMT 71
Query: 422 IEDFVSETRQIFEELFPQSEILPGVKKLIYHLNQHNIPMGLATSSSKESYELKTLKHQDL 601
+ FV E + I + + + +PG + LI +L+ H I +G+ T +KT + +
Sbjct: 72 PQQFVDEQQVIRAKFWSSLKPMPGAESLINNLSNHGIDIGVCTHPYA---IIKTAHLKHI 128
Query: 602 FDLFSHKTLGSSDPDVK--RGKPHPDIFIVAAN 694
F+ F + +P + RGKP PDI++ N
Sbjct: 129 FEKFGKNVITGDNPSIAPGRGKPFPDIWLKVLN 161
Score = 33.9 bits (74), Expect = 0.027
Identities = 15/23 (65%), Positives = 18/23 (78%)
Frame = +1
Query: 733 FRRSINGVKAARAAGMQVVMVPD 801
F SI GVK+A+AAGM V+ VPD
Sbjct: 183 FEDSIPGVKSAKAAGMHVIWVPD 205
>SPBC21C3.20c |git1||C2 domain protein Git1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1098
Score = 31.5 bits (68), Expect = 0.15
Identities = 19/64 (29%), Positives = 33/64 (51%), Gaps = 1/64 (1%)
Frame = +2
Query: 278 EDLYTVGFQKVASRYGKKFTFELKSRIMGQQTREFAGNIIKYLDLPLTIEDFVSE-TRQI 454
E+ YT F+K+ +YG+ F LK + G+ + G + + L T E+ S + +I
Sbjct: 480 EEQYTDFFKKLKEKYGEFFQNLLKKELTGKPESDLEGLRLVGVQLQATYENLKSNFSARI 539
Query: 455 FEEL 466
F +L
Sbjct: 540 FNQL 543
>SPAC1002.03c |gls2||glucosidase II Gls2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 923
Score = 29.1 bits (62), Expect = 0.78
Identities = 15/63 (23%), Positives = 35/63 (55%), Gaps = 1/63 (1%)
Frame = +2
Query: 515 LNQHNIPMGLATSSSKESYELKTLKHQDLFDLFSHKTL-GSSDPDVKRGKPHPDIFIVAA 691
+N+ ++ G TS +++ +H+D+ +++ HK + G+ + +KRG+ FI+
Sbjct: 525 MNEPSVFRGPETSMHRDAIHYGGWEHRDIHNIYGHKCINGTYNGLIKRGEGAVRPFILTR 584
Query: 692 NKF 700
+ F
Sbjct: 585 SFF 587
>SPAC22F3.09c |res2|mcs1, pct1|MBF transcription factor complex
subunit Res2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 657
Score = 28.3 bits (60), Expect = 1.4
Identities = 10/16 (62%), Positives = 12/16 (75%)
Frame = -3
Query: 703 EKLIGGYDKYIGVWLP 656
EK+ GGY KY G W+P
Sbjct: 67 EKVQGGYGKYQGTWVP 82
>SPBC17D1.07c |||GTPase regulator |Schizosaccharomyces pombe|chr
2|||Manual
Length = 962
Score = 28.3 bits (60), Expect = 1.4
Identities = 20/74 (27%), Positives = 38/74 (51%), Gaps = 4/74 (5%)
Frame = +2
Query: 326 KKFTFEL-KSRIMGQQTREFAGNI-IKYLDLPLTIEDF--VSETRQIFEELFPQSEILPG 493
KK EL K ++ + R+ G I + YL+ T+ +F + ++ I E ++++
Sbjct: 845 KKSMGELYKMEMIHECPRQLFGQILVVYLNRERTLLNFYLIENSKTIDEATLQLTDLIQA 904
Query: 494 VKKLIYHLNQHNIP 535
+K IY+L N+P
Sbjct: 905 IKTGIYYLRMFNLP 918
>SPAC18G6.10 |||chromosome segregation protein |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 688
Score = 27.5 bits (58), Expect = 2.4
Identities = 21/72 (29%), Positives = 31/72 (43%), Gaps = 1/72 (1%)
Frame = +2
Query: 533 PMGLATSSSKESYELKTLKHQDLFDLFSHKTLGSSDPDVKRGKPHPDIFIVAANKFLDKP 712
P L + KE T K D + K L S P KPH + + + +F+DKP
Sbjct: 55 PQHLLSHLQKEENS-NTSKASSSEDEIAPKYLYPSSPSKSTKKPHNETEPLLSPQFIDKP 113
Query: 713 -DLEKCLVFEDP 745
++E + E P
Sbjct: 114 SNIETPVKIESP 125
>SPAC821.13c ||SPAC955.01c|P-type ATPase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1562
Score = 27.1 bits (57), Expect = 3.2
Identities = 11/22 (50%), Positives = 14/22 (63%)
Frame = -2
Query: 323 RSARPLFETRPCINPQYLKLTH 258
R A P+F RP I P++LK H
Sbjct: 156 REASPVFNGRPPIPPEFLKSRH 177
>SPBC725.16 |res1|sct1|MBF transcription factor complex subunit
Res1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 637
Score = 26.6 bits (56), Expect = 4.2
Identities = 10/17 (58%), Positives = 12/17 (70%)
Frame = -3
Query: 703 EKLIGGYDKYIGVWLPS 653
EK+ GG KY G W+PS
Sbjct: 65 EKIQGGCGKYQGTWVPS 81
>SPAC57A7.11 |mip1||WD repeat protein Mip1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1313
Score = 26.6 bits (56), Expect = 4.2
Identities = 17/39 (43%), Positives = 20/39 (51%), Gaps = 2/39 (5%)
Frame = -1
Query: 666 CGFPL--FTSGSEEPKVLCENKSNKS*CLSVFNSYDSLL 556
C F L F G + ++ C N S CLS NS DSLL
Sbjct: 599 CAFILSVFCRGFPQGQLACLNPQVLSHCLSHLNSPDSLL 637
>SPAPB24D3.10c |agl1|agl|alpha-glucosidase Agl1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 969
Score = 26.6 bits (56), Expect = 4.2
Identities = 17/41 (41%), Positives = 19/41 (46%)
Frame = +2
Query: 167 TQVYWYFSYFIKIFENMTTFKPVTHVLFDMDGLILNTEDLY 289
T + + FSY FE T K VLFD G L ED Y
Sbjct: 141 TNLLYNFSYNANPFEFWVTRKSDGEVLFDTRGQKLVFEDQY 181
>SPAC323.06c |uba5||NEDD8 activating enzyme |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 500
Score = 25.8 bits (54), Expect = 7.3
Identities = 9/31 (29%), Positives = 21/31 (67%)
Frame = +2
Query: 167 TQVYWYFSYFIKIFENMTTFKPVTHVLFDMD 259
++ +W ++ +K+F + T F P++ +L DM+
Sbjct: 290 SESFWIMAHCLKMFYDETEFLPLSGLLPDMN 320
>SPCC132.01c ||SPCC1322.17c|DUF814 family
protein|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1021
Score = 25.4 bits (53), Expect = 9.6
Identities = 11/28 (39%), Positives = 17/28 (60%)
Frame = -1
Query: 621 LCENKSNKS*CLSVFNSYDSLLLLVAKP 538
LC +++ K+ L+ F DS+L V KP
Sbjct: 257 LCADETKKNDLLAAFQEADSILAAVNKP 284
>SPBC1826.01c |mot1||TATA-binding protein associated factor
Mot1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1953
Score = 25.4 bits (53), Expect = 9.6
Identities = 12/47 (25%), Positives = 22/47 (46%)
Frame = +1
Query: 316 ALRQKVHVRIKKSDNGTADERVCREHNKISRFASYNRRFCIRDTSNL 456
A R K+ ++KKSD +CR N + + +C+ D ++
Sbjct: 1454 AERAKIRSKMKKSDVVVTSYDICR--NDVDELVKIDWNYCVLDEGHV 1498
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,187,033
Number of Sequences: 5004
Number of extensions: 66330
Number of successful extensions: 195
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 179
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 191
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 394431430
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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