Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P16_F_M17
(810 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
08_01_0890 - 8761787-8761910,8761987-8762063,8762163-8762310,876... 140 1e-35
01_06_0768 - 31829753-31829851,31830454-31830593,31830729-318308... 103 2e-22
10_08_0301 - 16619499-16619675,16619770-16619853,16619932-166200... 99 5e-21
10_04_0002 - 7372425-7372601,7372697-7372780,7372859-7373010,737... 59 5e-09
03_02_0774 + 11074508-11074880,11076270-11076370,11076453-110765... 48 9e-06
10_08_0983 + 22036489-22036505,22036814-22036928,22037040-220371... 46 4e-05
09_06_0341 + 22406709-22407860 40 0.002
09_04_0073 - 14333096-14333290,14333377-14333638,14333811-143339... 39 0.005
08_02_1062 - 24016832-24016880,24016946-24016992,24017065-240171... 36 0.050
04_04_0761 + 27841337-27841479,27842220-27842223,27842265-27843371 34 0.12
07_03_1760 - 29289997-29290377,29290539-29290755,29291152-292939... 29 5.8
04_04_1163 - 31398565-31398654,31398729-31398812,31398893-313990... 29 5.8
09_02_0475 + 9724676-9724936,9725518-9726216,9726273-9726596,972... 28 7.6
>08_01_0890 -
8761787-8761910,8761987-8762063,8762163-8762310,
8762430-8762490,8764714-8764938,8764990-8765170
Length = 271
Score = 140 bits (340), Expect(2) = 1e-35
Identities = 70/160 (43%), Positives = 99/160 (61%), Gaps = 2/160 (1%)
Frame = +2
Query: 269 LNTEDLYTVGFQKVASRYGKKFTFELKSRIMGQQTREFAGNIIKY--LDLPLTIEDFVSE 442
L+TE YT +K+ +RYGK F + LK+++MG++ E A + LD LT E F+ E
Sbjct: 60 LDTEGFYTEVQEKILARYGKVFDWSLKAKMMGKKATESARIFVDECGLDGLLTPEQFLEE 119
Query: 443 TRQIFEELFPQSEILPGVKKLIYHLNQHNIPMGLATSSSKESYELKTLKHQDLFDLFSHK 622
+ +ELFP +LPGV +LI+HL+ + +PM +AT S K + LKT H+++F L H
Sbjct: 120 RESMLQELFPSCAVLPGVLRLIHHLHANGVPMAVATGSHKRHFALKTQNHKEMFTLMHHV 179
Query: 623 TLGSSDPDVKRGKPHPDIFIVAANKFLDKPDLEKCLVFED 742
+G DPDVK GKP PDIF+ A +F + CLVFED
Sbjct: 180 VMG-DDPDVKTGKPSPDIFLAAMRRFEGNIEPSNCLVFED 218
Score = 29.1 bits (62), Expect = 4.4
Identities = 14/26 (53%), Positives = 17/26 (65%)
Frame = +1
Query: 733 FRRSINGVKAARAAGMQVVMVPDPXL 810
F + +GV AA+ AGM VMVPD L
Sbjct: 216 FEDAPSGVAAAKNAGMYAVMVPDSRL 241
Score = 27.5 bits (58), Expect(2) = 1e-35
Identities = 10/13 (76%), Positives = 13/13 (100%)
Frame = +2
Query: 233 VTHVLFDMDGLIL 271
V+HV+FDMDGL+L
Sbjct: 17 VSHVIFDMDGLLL 29
>01_06_0768 -
31829753-31829851,31830454-31830593,31830729-31830818,
31830905-31831059,31831598-31831663,31831862-31831931,
31832299-31832429,31832516-31832702,31832828-31832894
Length = 334
Score = 103 bits (246), Expect = 2e-22
Identities = 62/170 (36%), Positives = 96/170 (56%)
Frame = +2
Query: 233 VTHVLFDMDGLILNTEDLYTVGFQKVASRYGKKFTFELKSRIMGQQTREFAGNIIKYLDL 412
V+ V+FD+DG +L+TE + + YGK E + R +GQ RE II L
Sbjct: 8 VSAVIFDLDGTLLDTERATRDVLNEFLAAYGKVPDKEKEERRLGQMYRESTTGIIADYGL 67
Query: 413 PLTIEDFVSETRQIFEELFPQSEILPGVKKLIYHLNQHNIPMGLATSSSKESYELKTLKH 592
PLT+E++ ++ + + +++ LPGV++L+ HL+++ +P+ LA++S + + + K LK
Sbjct: 68 PLTVEEYAVAIYPLYLKRWQKAKPLPGVERLVKHLHRNGVPLALASNSVRRNIDHKLLKL 127
Query: 593 QDLFDLFSHKTLGSSDPDVKRGKPHPDIFIVAANKFLDKPDLEKCLVFED 742
+D D FS LG V RGKP PDIF+ AA P CLV ED
Sbjct: 128 KDWKDCFS-VILGGD--QVPRGKPSPDIFLEAAKGLGVNP--SSCLVIED 172
>10_08_0301 -
16619499-16619675,16619770-16619853,16619932-16620083,
16620296-16620391,16620473-16620627,16620791-16620856,
16620993-16621062,16621175-16621305,16622121-16622307,
16622410-16622485
Length = 397
Score = 98.7 bits (235), Expect = 5e-21
Identities = 54/170 (31%), Positives = 93/170 (54%)
Frame = +2
Query: 233 VTHVLFDMDGLILNTEDLYTVGFQKVASRYGKKFTFELKSRIMGQQTREFAGNIIKYLDL 412
++HV+ D+DG +LNT+ + + + + GKK+ + +++G+ E A +++ L
Sbjct: 11 ISHVILDLDGTLLNTDCVVSQVLKPFLVKNGKKWDSKKAHKLVGKTPYEAAAVVLEDYGL 70
Query: 413 PLTIEDFVSETRQIFEELFPQSEILPGVKKLIYHLNQHNIPMGLATSSSKESYELKTLKH 592
P + E+F+S +F E + + LPG +LI HL + +P LA++S + + + K H
Sbjct: 71 PYSTEEFLSMLTPMFNEQWCNIKALPGANRLIKHLKSNGVPAALASNSPRSNIDAKISCH 130
Query: 593 QDLFDLFSHKTLGSSDPDVKRGKPHPDIFIVAANKFLDKPDLEKCLVFED 742
Q + FS G +V++GKP PDIF+ AA + P CLV ED
Sbjct: 131 QGWKESFSAIVGGD---EVEKGKPSPDIFLEAAKRMNTNP--PNCLVIED 175
>10_04_0002 -
7372425-7372601,7372697-7372780,7372859-7373010,
7373229-7373324,7373406-7373554,7373723-7373788,
7373925-7373994,7374106-7374236,7376464-7376471,
7377946-7378002
Length = 329
Score = 58.8 bits (136), Expect = 5e-09
Identities = 34/86 (39%), Positives = 46/86 (53%)
Frame = +2
Query: 485 LPGVKKLIYHLNQHNIPMGLATSSSKESYELKTLKHQDLFDLFSHKTLGSSDPDVKRGKP 664
LPG +LI HL + +P LA++S + E K HQ + FS G +V++GKP
Sbjct: 29 LPGANRLIKHLKSNGVPAALASNSPGSNIEAKISCHQGWKESFSAIVGGD---EVEKGKP 85
Query: 665 HPDIFIVAANKFLDKPDLEKCLVFED 742
PDIF+ AA + P CLV ED
Sbjct: 86 SPDIFLEAAKRMNTNP--PNCLVIED 109
>03_02_0774 +
11074508-11074880,11076270-11076370,11076453-11076509,
11076596-11076690,11077480-11077579,11078272-11078330,
11078874-11079001,11079362-11079440,11079708-11079795,
11080490-11080590,11080822-11080900,11081740-11081850,
11082655-11082750,11082885-11083007,11085750-11085947,
11086071-11086172,11086570-11086634,11086888-11087008,
11088540-11088697,11088823-11088973,11089414-11089521,
11089939-11090031,11090285-11090321,11090659-11090906,
11091396-11091542,11091929-11092099,11092166-11092175,
11093360-11093505
Length = 1114
Score = 48.0 bits (109), Expect = 9e-06
Identities = 49/178 (27%), Positives = 84/178 (47%), Gaps = 8/178 (4%)
Frame = +2
Query: 233 VTHVLFDMDGLILNTEDLYTVGFQKVASRYGKKFTFELKSRIMGQQTREFAGNIIKYLDL 412
V+ VLFDMDG++ N+E+L + + + G T + MG F G + K
Sbjct: 80 VSAVLFDMDGVLCNSEELSRLAGVDLFAEMGVDVTGDDFVPYMGTGEANFLGGVAKLKG- 138
Query: 413 PLTIEDFVSET-RQIFEELF------PQSEI-LPGVKKLIYHLNQHNIPMGLATSSSKES 568
++DF +E+ ++ F E++ P + I PG L+ + + +A+S+ +
Sbjct: 139 ---VKDFNAESAKKRFFEIYLDKYAKPNAGIGFPGALDLVTECKNAGLKVAVASSADRIK 195
Query: 569 YELKTLKHQDLFDLFSHKTLGSSDPDVKRGKPHPDIFIVAANKFLDKPDLEKCLVFED 742
+ LF + S+D + KP PDIF+ AA+K L D ++C+V ED
Sbjct: 196 VDANLAAAGLPLSLFD--AIVSADA-FENLKPAPDIFL-AASKTLG-VDTDECIVIED 248
>10_08_0983 +
22036489-22036505,22036814-22036928,22037040-22037194,
22037416-22037677,22037826-22038014
Length = 245
Score = 46.0 bits (104), Expect = 4e-05
Identities = 42/182 (23%), Positives = 79/182 (43%), Gaps = 6/182 (3%)
Frame = +2
Query: 215 MTTFKPVTHVLFDMDGLILNTEDLYTVGF----QKVASRYGKKFTFELKS-RIMGQQTRE 379
++ P+ +LFD+DG + +++ ++ F Q+V G + E S I G +
Sbjct: 10 LSKLAPLEAILFDIDGTLCDSDPIHFCAFRELLQQVGFNNGVPISEEFYSANISGGHNDD 69
Query: 380 FAGNIIKYLDLPLTIEDFVSETRQIFEELFPQSEI-LPGVKKLIYHLNQHNIPMGLATSS 556
A + LD ++ F+ + ++ L P+ + + G+ L + H + T++
Sbjct: 70 LARALFPDLDHDKAMK-FMDDKEALYRRLAPEQLVAVEGLHDLCRWIKDHKLKRAAVTNA 128
Query: 557 SKESYELKTLKHQDLFDLFSHKTLGSSDPDVKRGKPHPDIFIVAANKFLDKPDLEKCLVF 736
+ + EL L L + F +GS + R KP PD ++ A PD +F
Sbjct: 129 PRSNAEL-MLSLLGLTEFFPVLVIGS---ECDRAKPFPDPYLKALELIGASPD--HTFIF 182
Query: 737 ED 742
ED
Sbjct: 183 ED 184
>09_06_0341 + 22406709-22407860
Length = 383
Score = 40.3 bits (90), Expect = 0.002
Identities = 42/170 (24%), Positives = 79/170 (46%), Gaps = 5/170 (2%)
Frame = +2
Query: 242 VLFDMDGLILNTE-DLYTVGFQKVASRYGKK--FTFELKSRIMGQQTREFAGNIIKYLDL 412
V+F+ +G+I+ + +L + +A GK F LK RI G ++ + ++ +
Sbjct: 134 VIFEWEGVIVEDDAELERQAWFTLAQEEGKSPPLAFVLK-RIEGMKSEQAISEVLCWSRD 192
Query: 413 PLTIEDFVSETRQIFEELFPQS--EILPGVKKLIYHLNQHNIPMGLATSSSKESYELKTL 586
P + S +I L + ++ G ++ + L + IP+ +AT+ ++ E
Sbjct: 193 PSELRRLSSRKEEIRCNLRGTAFYQMRNGSREFMSTLANYKIPLAVATTRPRKVIE---- 248
Query: 587 KHQDLFDLFSHKTLGSSDPDVKRGKPHPDIFIVAANKFLDKPDLEKCLVF 736
+ D + S + DV RGKP P++F+ AA P E+C+VF
Sbjct: 249 EAIDAVGVRSFFDAVVAAEDVYRGKPDPEMFLYAAQLLSFIP--ERCIVF 296
>09_04_0073 -
14333096-14333290,14333377-14333638,14333811-14333965,
14334039-14334147,14335094-14335131
Length = 252
Score = 38.7 bits (86), Expect = 0.005
Identities = 42/181 (23%), Positives = 82/181 (45%), Gaps = 10/181 (5%)
Frame = +2
Query: 230 PVTHVLFDMDGLILNTEDLYTVGFQKVASRYGKKFTFELK-----SRIMGQQTREFAGNI 394
P+ VLFD+DG + +++ L+ V FQ++ G + + I G+ E A N+
Sbjct: 20 PIEAVLFDIDGTLCDSDPLHHVAFQEMLLEIGYNNGVPIDEEFFINNIAGRSDVEAAQNL 79
Query: 395 IKYLDLPLT-----IEDFVSETRQIFEELFPQSEILPGVKKLIYHLNQHNIPMGLATSSS 559
+ D PL +ED ++ R + +E + E + G+ K++ + H T++
Sbjct: 80 --FPDWPLEKGLKFLEDKEAKYRSLAKE---RLEPVKGLAKVVQWVKDHGYKRAAVTNAP 134
Query: 560 KESYELKTLKHQDLFDLFSHKTLGSSDPDVKRGKPHPDIFIVAANKFLDKPDLEKCLVFE 739
+ + EL + L D F +G + ++ KP P ++ A + + + +FE
Sbjct: 135 RINSEL-MISLLGLTDFFQAVIVGG---ECEKPKPAPFPYLKALKEL--QVSADHTFIFE 188
Query: 740 D 742
D
Sbjct: 189 D 189
>08_02_1062 -
24016832-24016880,24016946-24016992,24017065-24017124,
24017200-24017259,24017364-24017419,24017891-24017924,
24018015-24018089,24018348-24018398,24018495-24018539,
24019073-24019148,24019495-24019898
Length = 318
Score = 35.5 bits (78), Expect = 0.050
Identities = 25/85 (29%), Positives = 42/85 (49%)
Frame = +2
Query: 488 PGVKKLIYHLNQHNIPMGLATSSSKESYELKTLKHQDLFDLFSHKTLGSSDPDVKRGKPH 667
PGV +L+ + I + + ++++K S + L++ + F+ + DVK KP
Sbjct: 180 PGVLRLMDEVKGAGIKLAVCSAATKSSV-IMCLENLIGLERFNGLDCFLAGDDVKLKKPD 238
Query: 668 PDIFIVAANKFLDKPDLEKCLVFED 742
P I+I AA K + CLV ED
Sbjct: 239 PSIYITAAEKL--GVQSQNCLVVED 261
>04_04_0761 + 27841337-27841479,27842220-27842223,27842265-27843371
Length = 417
Score = 34.3 bits (75), Expect = 0.12
Identities = 38/170 (22%), Positives = 77/170 (45%), Gaps = 6/170 (3%)
Frame = +2
Query: 242 VLFDMDGLILNTED--LYTVGFQKVASRYGKKFTFE-LKSRIMGQQTREFAGNIIKYLDL 412
V+ + +G+++ +D L + ++ K F + + I G +T + ++ + +
Sbjct: 180 VILEWEGVVVEDDDPDLEPRVWYVLSLEEAKSFPPDAVLKEIEGMRTDQAILEVLHWSED 239
Query: 413 PLTIEDFVSETRQIFEELFPQS-EILPGVKKLIYHLNQHNIPMGLATSSSKESYE--LKT 583
P ++ + I++ L + ++ PGV + L +IP+ + T + S E +K
Sbjct: 240 PQEVQRLAARKEVIYKTLRGRFYQLRPGVLDFLNTLVDFDIPIAITTPRPRLSLEEGIKA 299
Query: 584 LKHQDLFDLFSHKTLGSSDPDVKRGKPHPDIFIVAANKFLDKPDLEKCLV 733
+ Q FD + D RGKP ++F V A + +PD+ CLV
Sbjct: 300 VGLQGYFDAIV------AAEDFCRGKPEGEMFEVTAGQLGLEPDV--CLV 341
>07_03_1760 -
29289997-29290377,29290539-29290755,29291152-29293953,
29294134-29294178,29294274-29294358,29294791-29294875,
29296429-29296530,29296747-29296851,29296940-29297029,
29297163-29297258
Length = 1335
Score = 28.7 bits (61), Expect = 5.8
Identities = 15/44 (34%), Positives = 25/44 (56%)
Frame = +2
Query: 518 NQHNIPMGLATSSSKESYELKTLKHQDLFDLFSHKTLGSSDPDV 649
NQ+N+ + L ++ SKE++ KTL+ + K G S PD+
Sbjct: 390 NQNNVNIALWSTPSKETFSEKTLRPSGISGNVGQKD-GGSTPDL 432
>04_04_1163 -
31398565-31398654,31398729-31398812,31398893-31399037,
31399118-31399239,31399338-31399376,31399491-31399601,
31399682-31399804,31399946-31400032,31400136-31400207,
31400349-31400621,31400704-31400895,31400988-31401171,
31401339-31401480,31401578-31401821,31401959-31402603,
31403024-31403293
Length = 940
Score = 28.7 bits (61), Expect = 5.8
Identities = 16/53 (30%), Positives = 24/53 (45%)
Frame = +1
Query: 295 RVSKSGLALRQKVHVRIKKSDNGTADERVCREHNKISRFASYNRRFCIRDTSN 453
R+ + G+ K + I SD ++ EH K RF + FCIR+ N
Sbjct: 228 RIPECGVFASLKANSAIGGSDYQDMIDQALNEHFKFDRFLARGDVFCIRNNWN 280
>09_02_0475 +
9724676-9724936,9725518-9726216,9726273-9726596,
9726900-9727847
Length = 743
Score = 28.3 bits (60), Expect = 7.6
Identities = 21/71 (29%), Positives = 32/71 (45%), Gaps = 9/71 (12%)
Frame = +2
Query: 464 LFPQSEILPGVKKLIYHLNQHNIPMGLATSSSKE---------SYELKTLKHQDLFDLFS 616
L+ LP +K ++ +H + T+SS+E SY+L L D + LFS
Sbjct: 240 LYANEHWLPDLKYVLGE-TKHKCTRFIVTTSSEEVAQVMHTVPSYKLGGLSEDDCWTLFS 298
Query: 617 HKTLGSSDPDV 649
K GS D +
Sbjct: 299 EKAFGSRDATI 309
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,700,600
Number of Sequences: 37544
Number of extensions: 381538
Number of successful extensions: 1001
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 965
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 995
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2209429392
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -