Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P16_F_M17
         (810 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY805323-1|AAV66543.1|  459|Anopheles gambiae beta subunit-GABA-...    26   1.2  
DQ342048-1|ABC69940.1|  847|Anopheles gambiae STIP protein.            24   4.8  
EF990671-1|ABS30732.1| 1256|Anopheles gambiae voltage-gated calc...    23   8.4  
DQ518576-1|ABF66618.1|  276|Anopheles gambiae putative cytoplasm...    23   8.4  

>AY805323-1|AAV66543.1|  459|Anopheles gambiae beta
           subunit-GABA-A-gated chloride channelprotein.
          Length = 459

 Score = 26.2 bits (55), Expect = 1.2
 Identities = 18/64 (28%), Positives = 30/64 (46%)
 Frame = +1

Query: 238 ARSL*YGWVNFKY*GFIHGRVSKSGLALRQKVHVRIKKSDNGTADERVCREHNKISRFAS 417
           A  L Y  VN+ Y G    + SK      +KV  + +K+   +AD+ +  +  ++S  AS
Sbjct: 298 AALLEYAAVNYTYWGARAKKKSKKNKEAERKVFGKTEKTSTCSADDIIELQDIRMSPIAS 357

Query: 418 YNRR 429
              R
Sbjct: 358 LRNR 361


>DQ342048-1|ABC69940.1|  847|Anopheles gambiae STIP protein.
          Length = 847

 Score = 24.2 bits (50), Expect = 4.8
 Identities = 11/41 (26%), Positives = 22/41 (53%)
 Frame = +2

Query: 545 ATSSSKESYELKTLKHQDLFDLFSHKTLGSSDPDVKRGKPH 667
           ++++S ES + +    QD+  +   ++LGS  P   +G  H
Sbjct: 120 SSATSSESEDERRTPPQDMRSMAGFRSLGSGAPPKAQGGKH 160


>EF990671-1|ABS30732.1| 1256|Anopheles gambiae voltage-gated calcium
           channel alpha2-delta subunit 1 protein.
          Length = 1256

 Score = 23.4 bits (48), Expect = 8.4
 Identities = 12/28 (42%), Positives = 15/28 (53%)
 Frame = -3

Query: 97  DALNRAHEH*KRKENLKTEXFADXSVKT 14
           D L+R   H  RKE+     F+  SVKT
Sbjct: 797 DGLDRTPSHPSRKEDRSRLGFSMFSVKT 824


>DQ518576-1|ABF66618.1|  276|Anopheles gambiae putative cytoplasmic
           carbonic anhydrase protein.
          Length = 276

 Score = 23.4 bits (48), Expect = 8.4
 Identities = 8/14 (57%), Positives = 12/14 (85%)
 Frame = +2

Query: 647 VKRGKPHPDIFIVA 688
           +K GKPHP++ I+A
Sbjct: 149 LKVGKPHPELDIIA 162


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 807,683
Number of Sequences: 2352
Number of extensions: 16592
Number of successful extensions: 21
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 85655418
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)