Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P16_F_M16
         (863 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

11_03_0042 - 9167881-9168075,9168159-9168251,9168328-9168409,916...    29   3.6  
01_01_0898 + 7078900-7079079,7080269-7080301,7080480-7080653,708...    29   4.8  

>11_03_0042 -
           9167881-9168075,9168159-9168251,9168328-9168409,
           9168495-9168605,9171653-9171898,9172448-9173073,
           9173402-9173422
          Length = 457

 Score = 29.5 bits (63), Expect = 3.6
 Identities = 12/29 (41%), Positives = 15/29 (51%)
 Frame = +1

Query: 592 QIHLAKQSKASATLRKYLRRTSKKHWRQW 678
           Q HL  Q  + A  R +  +T   HWRQW
Sbjct: 118 QEHLIYQPGSEALSRNFALQTISHHWRQW 146


>01_01_0898 +
           7078900-7079079,7080269-7080301,7080480-7080653,
           7080866-7083890,7084253-7084596
          Length = 1251

 Score = 29.1 bits (62), Expect = 4.8
 Identities = 12/29 (41%), Positives = 19/29 (65%)
 Frame = -1

Query: 572 FSPYIPHSHSGFSRHLFRFVIIIISIKHG 486
           FSP +  SHS  SRH  RF++ ++++  G
Sbjct: 893 FSPCLQKSHSN-SRHFLRFLLPVVTVAFG 920


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,672,254
Number of Sequences: 37544
Number of extensions: 309739
Number of successful extensions: 826
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 804
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 824
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2420970504
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)