Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P16_F_M16
         (863 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ968562-1|CAI91546.1|  998|Apis mellifera protein ( Apis mellif...    25   0.68 
AM420631-1|CAM06631.1|  153|Apis mellifera bursicon subunit alph...    22   6.3  
AM076717-1|CAJ28210.1|  501|Apis mellifera serotonin receptor pr...    22   6.3  
DQ244074-1|ABB36784.1|  517|Apis mellifera cytochrome P450 monoo...    22   8.4  

>AJ968562-1|CAI91546.1|  998|Apis mellifera protein ( Apis mellifera
           ORF for hypotheticalprotein. ).
          Length = 998

 Score = 25.4 bits (53), Expect = 0.68
 Identities = 10/27 (37%), Positives = 14/27 (51%)
 Frame = -1

Query: 311 FFPISVPGARRTLCRVIPLWRVFPW*P 231
           F P+S+ G    +    P+WR  PW P
Sbjct: 534 FSPLSLLGGPLVMVCSAPVWRFQPWGP 560


>AM420631-1|CAM06631.1|  153|Apis mellifera bursicon subunit alpha
           protein precursor protein.
          Length = 153

 Score = 22.2 bits (45), Expect = 6.3
 Identities = 7/17 (41%), Positives = 12/17 (70%)
 Frame = +1

Query: 46  CPKSVPPQVKFXPLVTK 96
           CP++ P + KF  ++TK
Sbjct: 92  CPRAKPGEKKFRKVITK 108


>AM076717-1|CAJ28210.1|  501|Apis mellifera serotonin receptor
           protein.
          Length = 501

 Score = 22.2 bits (45), Expect = 6.3
 Identities = 9/14 (64%), Positives = 11/14 (78%)
 Frame = +1

Query: 592 QIHLAKQSKASATL 633
           + HLAK+ KAS TL
Sbjct: 361 RFHLAKERKASTTL 374


>DQ244074-1|ABB36784.1|  517|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 517

 Score = 21.8 bits (44), Expect = 8.4
 Identities = 11/24 (45%), Positives = 13/24 (54%)
 Frame = -2

Query: 478 LGFGAGLEAAFRFILMGALGLLKP 407
           L +  GLE+    IL   LG LKP
Sbjct: 206 LAYKMGLESTCTLILGRHLGFLKP 229


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 190,784
Number of Sequences: 438
Number of extensions: 3833
Number of successful extensions: 5
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 27916710
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)