Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P16_F_M11
         (831 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292348-1|CAL23160.2|  346|Tribolium castaneum gustatory recept...    23   3.9  
AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      22   6.9  
AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.      22   6.9  
AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosin...    21   9.1  

>AM292348-1|CAL23160.2|  346|Tribolium castaneum gustatory receptor
           candidate 27 protein.
          Length = 346

 Score = 22.6 bits (46), Expect = 3.9
 Identities = 10/27 (37%), Positives = 14/27 (51%)
 Frame = +1

Query: 238 NTNVSPTKLMVNYIPELMTRDMMYALF 318
           N NVS       Y+P + T  + YA+F
Sbjct: 55  NYNVSEISENFYYLPAMSTGPLKYAIF 81


>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 21.8 bits (44), Expect = 6.9
 Identities = 7/12 (58%), Positives = 8/12 (66%)
 Frame = -3

Query: 238 WRRRRHSPYRFA 203
           WRR  H P+R A
Sbjct: 598 WRRNFHGPHRLA 609


>AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.
          Length = 682

 Score = 21.8 bits (44), Expect = 6.9
 Identities = 7/12 (58%), Positives = 8/12 (66%)
 Frame = -3

Query: 238 WRRRRHSPYRFA 203
           WRR  H P+R A
Sbjct: 490 WRRNFHGPHRLA 501


>AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosine
           kinase Torso-likeprotein protein.
          Length = 803

 Score = 21.4 bits (43), Expect = 9.1
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = -2

Query: 179 YRKQNSNKTHSTGRCSL 129
           +RKQNS+   +  RC L
Sbjct: 39  FRKQNSSSCGNGNRCDL 55


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.315    0.130    0.376 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 183,947
Number of Sequences: 336
Number of extensions: 3921
Number of successful extensions: 14
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 22829180
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)