Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P16_F_M11
(831 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z36752-6|CAA85327.1| 456|Caenorhabditis elegans Hypothetical pr... 128 4e-30
U28944-5|AAK68191.1| 408|Caenorhabditis elegans Hypothetical pr... 81 1e-15
AL032631-3|CAE54916.1| 583|Caenorhabditis elegans Hypothetical ... 72 4e-13
AL032631-2|CAA21572.1| 646|Caenorhabditis elegans Hypothetical ... 72 4e-13
U24123-1|AAA65224.1| 646|Caenorhabditis elegans polyadenylate-b... 71 1e-12
Z50874-3|CAA90773.1| 409|Caenorhabditis elegans Hypothetical pr... 64 2e-10
AL110485-8|CAB60356.1| 434|Caenorhabditis elegans Hypothetical ... 64 2e-10
AL032631-4|CAE54917.1| 586|Caenorhabditis elegans Hypothetical ... 63 2e-10
Z50874-2|CAA90772.1| 357|Caenorhabditis elegans Hypothetical pr... 62 5e-10
Z50110-2|CAA90446.1| 566|Caenorhabditis elegans Hypothetical pr... 61 8e-10
Z50110-1|CAA90444.1| 692|Caenorhabditis elegans Hypothetical pr... 61 8e-10
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 59 4e-09
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 59 4e-09
U28944-7|AAN63457.1| 295|Caenorhabditis elegans Hypothetical pr... 58 8e-09
U28944-6|AAN63456.1| 305|Caenorhabditis elegans Hypothetical pr... 58 8e-09
U28944-4|AAK68192.1| 376|Caenorhabditis elegans Hypothetical pr... 58 8e-09
Z78536-3|CAB01717.2| 360|Caenorhabditis elegans Hypothetical pr... 58 1e-08
Z36238-3|CAA85276.1| 404|Caenorhabditis elegans Hypothetical pr... 52 4e-07
DQ485531-1|ABF22491.1| 404|Caenorhabditis elegans RNA-binding p... 52 4e-07
D10877-1|BAA01645.1| 346|Caenorhabditis elegans hnRNP like prot... 51 9e-07
AF038613-6|ABB51186.1| 347|Caenorhabditis elegans Human hnrnp a... 51 9e-07
AF038613-5|AAB92051.1| 346|Caenorhabditis elegans Human hnrnp a... 51 9e-07
AL137227-1|CAB70238.2| 611|Caenorhabditis elegans Hypothetical ... 48 8e-06
AC024791-23|AAM81102.1| 346|Caenorhabditis elegans Rnp (rrm rna... 46 3e-05
AC024791-22|AAF60676.1| 339|Caenorhabditis elegans Rnp (rrm rna... 46 3e-05
AC024791-21|AAF60666.1| 749|Caenorhabditis elegans Rnp (rrm rna... 46 3e-05
U41531-7|AAA83161.2| 415|Caenorhabditis elegans Feminizing gene... 46 3e-05
U14946-1|AAA67723.1| 415|Caenorhabditis elegans ribonucleoprote... 46 3e-05
Z36238-4|CAD82915.1| 286|Caenorhabditis elegans Hypothetical pr... 46 4e-05
AC006833-6|AAF60950.1| 491|Caenorhabditis elegans Hypothetical ... 45 6e-05
U55363-5|AAA97963.1| 351|Caenorhabditis elegans Spindle orienta... 45 8e-05
AB052819-1|BAC65239.1| 351|Caenorhabditis elegans PIP-1 protein. 45 8e-05
AF098993-1|AAC67471.2| 367|Caenorhabditis elegans Zinc finger t... 44 1e-04
AF040642-5|AAN73870.2| 138|Caenorhabditis elegans Hypothetical ... 44 1e-04
U80455-2|AAB37882.2| 420|Caenorhabditis elegans Elav-type rna b... 43 2e-04
U80455-1|AAB37881.1| 584|Caenorhabditis elegans Elav-type rna b... 43 2e-04
U53931-1|AAA98566.1| 584|Caenorhabditis elegans elav-type ribon... 43 2e-04
EF523770-1|ABS18836.1| 513|Caenorhabditis elegans ELAV-type RNA... 43 2e-04
EF523766-1|ABS18832.1| 584|Caenorhabditis elegans ELAV-type RNA... 43 2e-04
Z77669-6|CAB01243.2| 371|Caenorhabditis elegans Hypothetical pr... 42 4e-04
U41007-10|AAL32214.1| 118|Caenorhabditis elegans Sr protein (sp... 42 7e-04
U41007-9|AAL32213.1| 153|Caenorhabditis elegans Sr protein (spl... 42 7e-04
U41007-8|AAA82270.1| 179|Caenorhabditis elegans Sr protein (spl... 42 7e-04
U79157-1|AAC26982.1| 496|Caenorhabditis elegans splicing factor... 41 0.001
AC024875-3|AAK29989.1| 496|Caenorhabditis elegans U2af splicing... 41 0.001
AC024875-2|AAM44400.1| 471|Caenorhabditis elegans U2af splicing... 41 0.001
AC024875-1|AAL00879.1| 474|Caenorhabditis elegans U2af splicing... 41 0.001
Z73102-13|CAA97405.1| 836|Caenorhabditis elegans Hypothetical p... 40 0.002
AF038613-8|AAL02515.2| 309|Caenorhabditis elegans Human hnrnp a... 40 0.002
AF038613-7|ABB51185.1| 308|Caenorhabditis elegans Human hnrnp a... 40 0.002
AL132904-14|CAC35847.2| 258|Caenorhabditis elegans Hypothetical... 40 0.003
AF242767-1|AAG36874.1| 258|Caenorhabditis elegans SF2 protein. 40 0.003
Z83230-6|CAB05746.1| 336|Caenorhabditis elegans Hypothetical pr... 39 0.004
U23172-15|AAN63408.1| 374|Caenorhabditis elegans Hypothetical p... 39 0.004
U23172-12|ABH03526.1| 562|Caenorhabditis elegans Hypothetical p... 39 0.004
Z81106-3|CAB03222.1| 84|Caenorhabditis elegans Hypothetical pr... 39 0.005
AL117204-22|CAB55151.1| 331|Caenorhabditis elegans Hypothetical... 39 0.005
Z83127-4|CAB05631.1| 872|Caenorhabditis elegans Hypothetical pr... 38 0.007
Z66521-4|CAD59160.1| 150|Caenorhabditis elegans Hypothetical pr... 38 0.007
Z66521-3|CAD59159.1| 148|Caenorhabditis elegans Hypothetical pr... 38 0.007
Z66521-2|CAA91395.1| 312|Caenorhabditis elegans Hypothetical pr... 38 0.007
Z81108-4|CAB03237.1| 85|Caenorhabditis elegans Hypothetical pr... 38 0.009
Z81473-3|CAB03896.4| 514|Caenorhabditis elegans Hypothetical pr... 38 0.012
AY342388-1|AAQ19851.1| 514|Caenorhabditis elegans putative RNA-... 38 0.012
Z66521-8|CAA91394.1| 281|Caenorhabditis elegans Hypothetical pr... 37 0.020
Z97628-2|CAB10726.2| 427|Caenorhabditis elegans Hypothetical pr... 36 0.027
Z81108-1|CAB03236.1| 83|Caenorhabditis elegans Hypothetical pr... 36 0.027
Z81080-5|CAB03088.2| 427|Caenorhabditis elegans Hypothetical pr... 36 0.027
Z81080-2|CAD56584.1| 358|Caenorhabditis elegans Hypothetical pr... 36 0.027
AC024826-10|AAM97977.1| 435|Caenorhabditis elegans Hypothetical... 36 0.027
AC024826-8|AAF60795.2| 580|Caenorhabditis elegans Hypothetical ... 36 0.027
U00052-10|AAK21429.2| 289|Caenorhabditis elegans Rnp (rrm rna b... 36 0.036
Z32683-11|CAA83626.1| 142|Caenorhabditis elegans Hypothetical p... 35 0.062
Z81038-2|CAB02757.1| 454|Caenorhabditis elegans Hypothetical pr... 35 0.082
Z92826-4|CAB07322.1| 309|Caenorhabditis elegans Hypothetical pr... 34 0.11
Z50044-2|CAA90354.1| 256|Caenorhabditis elegans Hypothetical pr... 34 0.11
Z83119-2|CAB05579.2| 608|Caenorhabditis elegans Hypothetical pr... 34 0.14
U23484-3|AAK68298.1| 126|Caenorhabditis elegans Sr protein (spl... 33 0.19
U23484-2|AAC46767.1| 196|Caenorhabditis elegans Sr protein (spl... 33 0.19
U21320-5|AAA62536.2| 332|Caenorhabditis elegans Rnp (rrm rna bi... 32 0.58
AF047662-1|AAC04442.1| 248|Caenorhabditis elegans Suppressor pr... 32 0.58
Z99279-4|CAB16494.1| 121|Caenorhabditis elegans Hypothetical pr... 31 0.77
Z78019-5|CAB01455.1| 305|Caenorhabditis elegans Hypothetical pr... 31 0.77
U21302-2|AAA92287.1| 305|Caenorhabditis elegans RNP-1 protein. 31 0.77
AF067616-7|AAM98029.1| 423|Caenorhabditis elegans Hypothetical ... 31 0.77
AF067616-6|AAC19192.1| 520|Caenorhabditis elegans Hypothetical ... 31 0.77
AF067616-5|AAU05574.1| 497|Caenorhabditis elegans Hypothetical ... 31 0.77
AC084197-11|AAM44397.1| 305|Caenorhabditis elegans Homologous t... 31 1.0
AC084197-10|AAY43984.1| 308|Caenorhabditis elegans Homologous t... 31 1.0
Z73898-8|CAJ90496.1| 431|Caenorhabditis elegans Hypothetical pr... 30 1.8
Z73898-7|CAA98070.1| 577|Caenorhabditis elegans Hypothetical pr... 30 1.8
Z35601-1|CAA84667.2| 320|Caenorhabditis elegans Hypothetical pr... 30 2.3
U55857-7|AAA98033.1| 217|Caenorhabditis elegans Rnp (rrm rna bi... 30 2.3
AB036738-1|BAB13470.1| 320|Caenorhabditis elegans neural RNA-bi... 30 2.3
Z81084-7|CAB03111.1| 312|Caenorhabditis elegans Hypothetical pr... 29 3.1
Z81037-10|CAB02754.1| 312|Caenorhabditis elegans Hypothetical p... 29 3.1
X95609-1|CAA64867.1| 312|Caenorhabditis elegans mec-8 protein. 29 3.1
X95608-1|CAA64866.1| 312|Caenorhabditis elegans mec-8 protein. 29 3.1
U28944-8|AAK68193.1| 103|Caenorhabditis elegans Hypothetical pr... 29 3.1
U28738-11|AAK68399.3| 166|Caenorhabditis elegans Sr protein (sp... 29 3.1
U28738-10|AAK72066.3| 208|Caenorhabditis elegans Sr protein (sp... 29 3.1
U28738-9|AAA68314.3| 208|Caenorhabditis elegans Sr protein (spl... 29 3.1
U23172-14|AAL02495.1| 165|Caenorhabditis elegans Hypothetical p... 29 3.1
U80455-3|AAO38606.1| 145|Caenorhabditis elegans Elav-type rna b... 29 4.1
U32305-18|AAK18852.2| 719|Caenorhabditis elegans Hypothetical p... 29 4.1
AF047659-10|AAC04430.1| 798|Caenorhabditis elegans Hypothetical... 29 4.1
AF003134-2|AAB54141.5| 691|Caenorhabditis elegans Hypothetical ... 29 5.4
Z81107-9|CAB03234.2| 304|Caenorhabditis elegans Hypothetical pr... 28 7.1
Z68335-4|CAA92732.2| 304|Caenorhabditis elegans Hypothetical pr... 28 7.1
U39997-3|AAK68389.1| 498|Caenorhabditis elegans Human daz (dele... 28 7.1
AB025253-1|BAA88577.1| 499|Caenorhabditis elegans DAZ-1 protein. 28 7.1
Z81017-13|CAB02674.2| 526|Caenorhabditis elegans Hypothetical p... 28 9.4
Z68005-5|CAA91993.2| 526|Caenorhabditis elegans Hypothetical pr... 28 9.4
U28928-13|AAL16321.1| 339|Caenorhabditis elegans Hypothetical p... 28 9.4
U28928-12|AAL16320.2| 597|Caenorhabditis elegans Hypothetical p... 28 9.4
>Z36752-6|CAA85327.1| 456|Caenorhabditis elegans Hypothetical
protein F35H8.5 protein.
Length = 456
Score = 128 bits (310), Expect = 4e-30
Identities = 68/161 (42%), Positives = 105/161 (65%), Gaps = 14/161 (8%)
Frame = +1
Query: 250 SPTKLMVNYIPELMTRDMMYALFSAMGKIESCKLIANR------GYGFVEYEKHEDAEKA 411
S T L++NY+P+ MT++ + +LF+++G+IESCKL+ ++ GYGFV Y + EDA +A
Sbjct: 40 SKTNLIINYLPQGMTQEEVRSLFTSIGEIESCKLVRDKVTGQSLGYGFVNYVREEDALRA 99
Query: 412 RAAFNGLLMQGKTLKVSFALLNPENKVSHKPDTESNLYISNLPPDMTLERLNTLFSPFGN 591
++FNGL +Q KT+KVS+A + S+ SNLY+S +P MTL L ++F PFG
Sbjct: 100 VSSFNGLRLQNKTIKVSYA------RPSNDQIKGSNLYVSGIPKSMTLHELESIFRPFGQ 153
Query: 592 ITNSRV--------SQGIGFVCYETRQQAEDAIKHMNGQCP 690
I SR+ S+G+GFV ++ + +A+ AIK +NG P
Sbjct: 154 IITSRILSDNVTGLSKGVGFVRFDKKDEADVAIKTLNGSIP 194
Score = 41.5 bits (93), Expect = 7e-04
Identities = 24/96 (25%), Positives = 51/96 (53%), Gaps = 6/96 (6%)
Frame = +1
Query: 235 ANTNVSPTKLMVNYIPELMTRDMMYALFSAMGKIESCKLIAN------RGYGFVEYEKHE 396
+N + + L V+ IP+ MT + ++F G+I + +++++ +G GFV ++K +
Sbjct: 121 SNDQIKGSNLYVSGIPKSMTLHELESIFRPFGQIITSRILSDNVTGLSKGVGFVRFDKKD 180
Query: 397 DAEKARAAFNGLLMQGKTLKVSFALLNPENKVSHKP 504
+A+ A NG + G + +++ N N S+ P
Sbjct: 181 EADVAIKTLNGSIPSGCSEQITVKFAN--NPASNNP 214
Score = 39.1 bits (87), Expect = 0.004
Identities = 21/65 (32%), Positives = 34/65 (52%), Gaps = 5/65 (7%)
Frame = +1
Query: 301 MMYALFSAMGKIESCKLIAN-----RGYGFVEYEKHEDAEKARAAFNGLLMQGKTLKVSF 465
+++ LFS G I + K++ + +GY FV + +A A + NG + GKTL+V F
Sbjct: 389 LLWQLFSQFGAIVNVKILRDLTQQCKGYAFVSMSNYTEAYNAMLSLNGTNLAGKTLQVVF 448
Query: 466 ALLNP 480
P
Sbjct: 449 KSSTP 453
>U28944-5|AAK68191.1| 408|Caenorhabditis elegans Hypothetical
protein C18A3.5a protein.
Length = 408
Score = 80.6 bits (190), Expect = 1e-15
Identities = 47/160 (29%), Positives = 82/160 (51%), Gaps = 11/160 (6%)
Frame = +1
Query: 238 NTNVSPTKLMVNYIPELMTRDMMYALFSAMGKIESCKLI---ANRGYGFVEYEKHEDAEK 408
N + P L V + +T D + LF+ +G + K+I +N Y FVE+ H A +
Sbjct: 40 NGSDEPRTLYVGNLDSTVTEDFIATLFNQIGSVTKTKVIFDGSNDPYAFVEFSDHGQASQ 99
Query: 409 ARAAFNGLLMQGKTLKVSFALLNPENKVSHKPDTESNLYISNLPPDMTLERLNTLFSPFG 588
A N L+ + +KV++A+ + + ++++ +L ++ ++L F PFG
Sbjct: 100 ALQTMNKRLLLDREMKVNWAVEPGQQQSKIDTTRHFHVFVGDLSSEVDNQKLREAFQPFG 159
Query: 589 NI--------TNSRVSQGIGFVCYETRQQAEDAIKHMNGQ 684
++ TN+ S+G GFV Y R++AE AI+ MNGQ
Sbjct: 160 DVSDAKVIRDTNTTKSKGYGFVSYPKREEAERAIEQMNGQ 199
Score = 58.0 bits (134), Expect = 8e-09
Identities = 42/145 (28%), Positives = 69/145 (47%), Gaps = 22/145 (15%)
Frame = +1
Query: 316 FSAMGKIESCKLIAN------RGYGFVEYEKHEDAEKARAAFNGLLMQGKTLKVSFALLN 477
F G + K+I + +GYGFV Y K E+AE+A NG + +T++ ++A
Sbjct: 155 FQPFGDVSDAKVIRDTNTTKSKGYGFVSYPKREEAERAIEQMNGQWLGRRTIRTNWATRK 214
Query: 478 P--ENKVSHKPD------------TESNLYISNLPPDMTLERLNTLFSPFGNITNSRV-- 609
P + K SH + +++Y+ N+ +T + + F+ FG IT R+
Sbjct: 215 PGDQEKPSHYNEKSYDEIYNQTSGDNTSVYVGNI-ASLTEDEIRQGFASFGRITEVRIFK 273
Query: 610 SQGIGFVCYETRQQAEDAIKHMNGQ 684
QG FV ++ + A AI MN Q
Sbjct: 274 MQGYAFVKFDNKDAAAKAIVQMNNQ 298
Score = 34.3 bits (75), Expect = 0.11
Identities = 20/75 (26%), Positives = 38/75 (50%)
Frame = +1
Query: 241 TNVSPTKLMVNYIPELMTRDMMYALFSAMGKIESCKLIANRGYGFVEYEKHEDAEKARAA 420
T+ T + V I L T D + F++ G+I ++ +GY FV+++ + A KA
Sbjct: 236 TSGDNTSVYVGNIASL-TEDEIRQGFASFGRITEVRIFKMQGYAFVKFDNKDAAAKAIVQ 294
Query: 421 FNGLLMQGKTLKVSF 465
N + G+ ++ S+
Sbjct: 295 MNNQDVGGQLVRCSW 309
>AL032631-3|CAE54916.1| 583|Caenorhabditis elegans Hypothetical
protein Y106G6H.2b protein.
Length = 583
Score = 72.1 bits (169), Expect = 4e-13
Identities = 46/152 (30%), Positives = 76/152 (50%), Gaps = 13/152 (8%)
Frame = +1
Query: 262 LMVNYIPELMTRDMMYALFSAMGKIESCKLIAN-----RGYGFVEYEKHEDAEKARAAFN 426
+ + + +++ +Y FS G I SCK+ + +GYGFV +E E A+ A N
Sbjct: 59 IFIKNLDKVIDNKSIYDTFSLFGNILSCKVAIDEDGFSKGYGFVHFETEEAAQNAIQKVN 118
Query: 427 GLLMQGKTLKV-SFALLNPENK-VSHKPDTESNLYISNLPPDMTLERLNTLFSPFGNITN 600
G+L+ GK + V F N+ + +N+Y+ N E L LF+ FGNIT+
Sbjct: 119 GMLLAGKKVFVGKFQPRAQRNRELGETAKQFTNVYVKNFGDHYNKETLEKLFAKFGNITS 178
Query: 601 SRV------SQGIGFVCYETRQQAEDAIKHMN 678
V S+G GFV + ++AE A++ ++
Sbjct: 179 CEVMTVEGKSKGFGFVAFANPEEAETAVQALH 210
Score = 63.3 bits (147), Expect = 2e-10
Identities = 45/168 (26%), Positives = 80/168 (47%), Gaps = 25/168 (14%)
Frame = +1
Query: 256 TKLMVNYIPELMTRDMMYALFSAMGKIESCKLIA----NRGYGFVEYEKHEDAEKARAAF 423
T + V + ++ + LF+ G I SC+++ ++G+GFV + E+AE A A
Sbjct: 150 TNVYVKNFGDHYNKETLEKLFAKFGNITSCEVMTVEGKSKGFGFVAFANPEEAETAVQAL 209
Query: 424 NGLLMQGKTLKVSFALLNPENK---------VSHKPDTES-----NLYISNLPPDMTLER 561
+ ++G LK+ +++ HK + NLY+ NL + +
Sbjct: 210 HDSTIEGTDLKLHVCRAQKKSERHAELKKKHEQHKAERMQKYQGVNLYVKNLDETVDDDG 269
Query: 562 LNTLFSPFGNITNSRV-------SQGIGFVCYETRQQAEDAIKHMNGQ 684
L F +GNIT+++V S+G GFVC+E ++A A+ MN +
Sbjct: 270 LKKQFESYGNITSAKVMTDENGRSKGFGFVCFEKPEEATSAVTEMNSK 317
Score = 49.2 bits (112), Expect = 4e-06
Identities = 32/102 (31%), Positives = 55/102 (53%), Gaps = 7/102 (6%)
Frame = +1
Query: 397 DAEKARAAFNGLLMQGKTLKVSFALLNPENKVSHKPDTESNLYISNLPPDMTLERLNTLF 576
DAE+A N + GK +++ ++ +P + S N++I NL + + + F
Sbjct: 22 DAERAMDTMNFEALHGKPMRIMWSQRDPAMRRSGA----GNIFIKNLDKVIDNKSIYDTF 77
Query: 577 SPFGNITNSRV-------SQGIGFVCYETRQQAEDAIKHMNG 681
S FGNI + +V S+G GFV +ET + A++AI+ +NG
Sbjct: 78 SLFGNILSCKVAIDEDGFSKGYGFVHFETEEAAQNAIQKVNG 119
Score = 35.9 bits (79), Expect = 0.036
Identities = 23/74 (31%), Positives = 37/74 (50%), Gaps = 5/74 (6%)
Frame = +1
Query: 262 LMVNYIPELMTRDMMYALFSAMGKIESCKLIAN-----RGYGFVEYEKHEDAEKARAAFN 426
L V + E + D + F + G I S K++ + +G+GFV +EK E+A A N
Sbjct: 256 LYVKNLDETVDDDGLKKQFESYGNITSAKVMTDENGRSKGFGFVCFEKPEEATSAVTEMN 315
Query: 427 GLLMQGKTLKVSFA 468
++ K L V+ A
Sbjct: 316 SKMVCSKPLYVAIA 329
>AL032631-2|CAA21572.1| 646|Caenorhabditis elegans Hypothetical
protein Y106G6H.2a protein.
Length = 646
Score = 72.1 bits (169), Expect = 4e-13
Identities = 46/152 (30%), Positives = 76/152 (50%), Gaps = 13/152 (8%)
Frame = +1
Query: 262 LMVNYIPELMTRDMMYALFSAMGKIESCKLIAN-----RGYGFVEYEKHEDAEKARAAFN 426
+ + + +++ +Y FS G I SCK+ + +GYGFV +E E A+ A N
Sbjct: 122 IFIKNLDKVIDNKSIYDTFSLFGNILSCKVAIDEDGFSKGYGFVHFETEEAAQNAIQKVN 181
Query: 427 GLLMQGKTLKV-SFALLNPENK-VSHKPDTESNLYISNLPPDMTLERLNTLFSPFGNITN 600
G+L+ GK + V F N+ + +N+Y+ N E L LF+ FGNIT+
Sbjct: 182 GMLLAGKKVFVGKFQPRAQRNRELGETAKQFTNVYVKNFGDHYNKETLEKLFAKFGNITS 241
Query: 601 SRV------SQGIGFVCYETRQQAEDAIKHMN 678
V S+G GFV + ++AE A++ ++
Sbjct: 242 CEVMTVEGKSKGFGFVAFANPEEAETAVQALH 273
Score = 63.3 bits (147), Expect = 2e-10
Identities = 46/166 (27%), Positives = 83/166 (50%), Gaps = 13/166 (7%)
Frame = +1
Query: 223 GGGDANTNVSPTKLMVNYIPELMTRDMMYALFSAMGKIES---CKLIANR---GYGFVEY 384
G ++ + L V + + +++ FSA G + S C+ A R GY +V +
Sbjct: 21 GQNQTGSSYTMASLYVGDLHPDVNESILFEKFSAAGPVLSIRVCRDNATRLSLGYAYVNF 80
Query: 385 EKHEDAEKARAAFNGLLMQGKTLKVSFALLNPENKVSHKPDTESNLYISNLPPDMTLERL 564
++ DAE+A N + GK +++ ++ +P + S N++I NL + + +
Sbjct: 81 QQPADAERAMDTMNFEALHGKPMRIMWSQRDPAMRRSGA----GNIFIKNLDKVIDNKSI 136
Query: 565 NTLFSPFGNITNSRV-------SQGIGFVCYETRQQAEDAIKHMNG 681
FS FGNI + +V S+G GFV +ET + A++AI+ +NG
Sbjct: 137 YDTFSLFGNILSCKVAIDEDGFSKGYGFVHFETEEAAQNAIQKVNG 182
Score = 63.3 bits (147), Expect = 2e-10
Identities = 45/168 (26%), Positives = 80/168 (47%), Gaps = 25/168 (14%)
Frame = +1
Query: 256 TKLMVNYIPELMTRDMMYALFSAMGKIESCKLIA----NRGYGFVEYEKHEDAEKARAAF 423
T + V + ++ + LF+ G I SC+++ ++G+GFV + E+AE A A
Sbjct: 213 TNVYVKNFGDHYNKETLEKLFAKFGNITSCEVMTVEGKSKGFGFVAFANPEEAETAVQAL 272
Query: 424 NGLLMQGKTLKVSFALLNPENK---------VSHKPDTES-----NLYISNLPPDMTLER 561
+ ++G LK+ +++ HK + NLY+ NL + +
Sbjct: 273 HDSTIEGTDLKLHVCRAQKKSERHAELKKKHEQHKAERMQKYQGVNLYVKNLDETVDDDG 332
Query: 562 LNTLFSPFGNITNSRV-------SQGIGFVCYETRQQAEDAIKHMNGQ 684
L F +GNIT+++V S+G GFVC+E ++A A+ MN +
Sbjct: 333 LKKQFESYGNITSAKVMTDENGRSKGFGFVCFEKPEEATSAVTEMNSK 380
Score = 35.9 bits (79), Expect = 0.036
Identities = 23/74 (31%), Positives = 37/74 (50%), Gaps = 5/74 (6%)
Frame = +1
Query: 262 LMVNYIPELMTRDMMYALFSAMGKIESCKLIAN-----RGYGFVEYEKHEDAEKARAAFN 426
L V + E + D + F + G I S K++ + +G+GFV +EK E+A A N
Sbjct: 319 LYVKNLDETVDDDGLKKQFESYGNITSAKVMTDENGRSKGFGFVCFEKPEEATSAVTEMN 378
Query: 427 GLLMQGKTLKVSFA 468
++ K L V+ A
Sbjct: 379 SKMVCSKPLYVAIA 392
>U24123-1|AAA65224.1| 646|Caenorhabditis elegans
polyadenylate-binding protein protein.
Length = 646
Score = 70.9 bits (166), Expect = 1e-12
Identities = 45/152 (29%), Positives = 76/152 (50%), Gaps = 13/152 (8%)
Frame = +1
Query: 262 LMVNYIPELMTRDMMYALFSAMGKIESCKLIAN-----RGYGFVEYEKHEDAEKARAAFN 426
+ + + +++ +Y FS G I SCK+ + +GYGFV +E E A+ A N
Sbjct: 122 IFIKNLDKVIDNKSIYDTFSLFGNILSCKVAIDEDGFSKGYGFVHFETEEAAQNAIQKVN 181
Query: 427 GLLMQGKTLKV-SFALLNPENK-VSHKPDTESNLYISNLPPDMTLERLNTLFSPFGNITN 600
G+L+ GK + V F N+ + +N+Y+ N E L +F+ FGNIT+
Sbjct: 182 GMLLAGKKVFVGKFQPRAQRNRELGETAKQFTNVYVKNFGDHYNKETLEKVFAKFGNITS 241
Query: 601 SRV------SQGIGFVCYETRQQAEDAIKHMN 678
V S+G GFV + ++AE A++ ++
Sbjct: 242 CEVMTVEGKSKGFGFVAFANPEEAETAVQALH 273
Score = 63.3 bits (147), Expect = 2e-10
Identities = 46/166 (27%), Positives = 83/166 (50%), Gaps = 13/166 (7%)
Frame = +1
Query: 223 GGGDANTNVSPTKLMVNYIPELMTRDMMYALFSAMGKIES---CKLIANR---GYGFVEY 384
G ++ + L V + + +++ FSA G + S C+ A R GY +V +
Sbjct: 21 GQNQTGSSYTMASLYVGDLHPDVNESILFEKFSAAGPVLSIRVCRDNATRLSLGYAYVNF 80
Query: 385 EKHEDAEKARAAFNGLLMQGKTLKVSFALLNPENKVSHKPDTESNLYISNLPPDMTLERL 564
++ DAE+A N + GK +++ ++ +P + S N++I NL + + +
Sbjct: 81 QQPADAERAMDTMNFEALHGKPMRIMWSQRDPAMRRSGA----GNIFIKNLDKVIDNKSI 136
Query: 565 NTLFSPFGNITNSRV-------SQGIGFVCYETRQQAEDAIKHMNG 681
FS FGNI + +V S+G GFV +ET + A++AI+ +NG
Sbjct: 137 YDTFSLFGNILSCKVAIDEDGFSKGYGFVHFETEEAAQNAIQKVNG 182
Score = 62.1 bits (144), Expect = 5e-10
Identities = 44/168 (26%), Positives = 80/168 (47%), Gaps = 25/168 (14%)
Frame = +1
Query: 256 TKLMVNYIPELMTRDMMYALFSAMGKIESCKLIA----NRGYGFVEYEKHEDAEKARAAF 423
T + V + ++ + +F+ G I SC+++ ++G+GFV + E+AE A A
Sbjct: 213 TNVYVKNFGDHYNKETLEKVFAKFGNITSCEVMTVEGKSKGFGFVAFANPEEAETAVQAL 272
Query: 424 NGLLMQGKTLKVSFALLNPENK---------VSHKPDTES-----NLYISNLPPDMTLER 561
+ ++G LK+ +++ HK + NLY+ NL + +
Sbjct: 273 HDSTIEGTDLKLHVCRAQKKSERHAELKKKHEQHKAERMQKYQGVNLYVKNLDETVDDDG 332
Query: 562 LNTLFSPFGNITNSRV-------SQGIGFVCYETRQQAEDAIKHMNGQ 684
L F +GNIT+++V S+G GFVC+E ++A A+ MN +
Sbjct: 333 LKKQFESYGNITSAKVMTDENGRSKGFGFVCFEKPEEATSAVTEMNSK 380
Score = 34.3 bits (75), Expect = 0.11
Identities = 22/72 (30%), Positives = 36/72 (50%), Gaps = 5/72 (6%)
Frame = +1
Query: 262 LMVNYIPELMTRDMMYALFSAMGKIESCKLIAN-----RGYGFVEYEKHEDAEKARAAFN 426
L V + E + D + F + G I S K++ + +G+GFV +EK E+A A N
Sbjct: 319 LYVKNLDETVDDDGLKKQFESYGNITSAKVMTDENGRSKGFGFVCFEKPEEATSAVTEMN 378
Query: 427 GLLMQGKTLKVS 462
++ K L V+
Sbjct: 379 SKMVCSKPLYVA 390
>Z50874-3|CAA90773.1| 409|Caenorhabditis elegans Hypothetical
protein R10E4.2b protein.
Length = 409
Score = 63.7 bits (148), Expect = 2e-10
Identities = 47/161 (29%), Positives = 80/161 (49%), Gaps = 13/161 (8%)
Frame = +1
Query: 238 NTNVSPTKLMVNYIPELMTRDMMYALFSAMGKIESCKLIANR------GYGFVEYEKHED 399
NT S T L + + D++ + S G I S K I ++ GYGFV++E
Sbjct: 101 NTTPSSTNLYIRGLMPNTNDDLLREMCSKYGNIASTKAIMDKATNNCKGYGFVDFES--- 157
Query: 400 AEKARAAFNGLLMQGKTLKVSFALLNPENKVSHKPDTESNLYISNLPPDMTLERLNTLFS 579
+ A AA +GL +G +++ K+ + +NLYI+NLP D T + L T +
Sbjct: 158 PQAAAAAVDGLNTEGVQAQMA--------KLQQQEQDPTNLYIANLPLDFTEQMLETELN 209
Query: 580 PFGNITNSRV-------SQGIGFVCYETRQQAEDAIKHMNG 681
FG + ++R+ S+G+GF +++++ E I +NG
Sbjct: 210 KFGMVISTRILRTPDNQSRGVGFARMDSKEKCEVIISALNG 250
>AL110485-8|CAB60356.1| 434|Caenorhabditis elegans Hypothetical
protein Y46G5A.13 protein.
Length = 434
Score = 63.7 bits (148), Expect = 2e-10
Identities = 45/163 (27%), Positives = 78/163 (47%), Gaps = 14/163 (8%)
Frame = +1
Query: 235 ANTNVSPTKLMVNYIPELMTRDMMYALFSAMGKIESCKLI---ANRGYGFVEYEKHEDAE 405
A+ + P L V + +T + + LF+ +G + K+I N Y FVE+ H A
Sbjct: 33 ASGSEDPRTLFVANLDPAITDEFLATLFNQIGAVMKAKIIFEGLNDPYAFVEFSDHNQAT 92
Query: 406 KARAAFNGLLMQGKTLKVSFALLNPE-NKVSHKPDTESN--LYISNLPPDMTLERLNTLF 576
A + NG + K + V++A E + KP+T + +++ +L ++ +L F
Sbjct: 93 LALQSHNGRELLEKEMHVTWAFEPREPGENRSKPETSRHFHVFVGDLCSEIDSTKLREAF 152
Query: 577 SPFGNITNSRV--------SQGIGFVCYETRQQAEDAIKHMNG 681
FG ++ +++ +G GFV Y R+ AE AI MNG
Sbjct: 153 VKFGEVSEAKIIRDNNTNKGKGYGFVSYPRREDAERAIDEMNG 195
Score = 41.1 bits (92), Expect = 0.001
Identities = 20/62 (32%), Positives = 34/62 (54%), Gaps = 6/62 (9%)
Frame = +1
Query: 316 FSAMGKIESCKLIAN------RGYGFVEYEKHEDAEKARAAFNGLLMQGKTLKVSFALLN 477
F G++ K+I + +GYGFV Y + EDAE+A NG + +T++ ++A
Sbjct: 152 FVKFGEVSEAKIIRDNNTNKGKGYGFVSYPRREDAERAIDEMNGAWLGRRTIRTNWATRK 211
Query: 478 PE 483
P+
Sbjct: 212 PD 213
>AL032631-4|CAE54917.1| 586|Caenorhabditis elegans Hypothetical
protein Y106G6H.2c protein.
Length = 586
Score = 63.3 bits (147), Expect = 2e-10
Identities = 45/168 (26%), Positives = 80/168 (47%), Gaps = 25/168 (14%)
Frame = +1
Query: 256 TKLMVNYIPELMTRDMMYALFSAMGKIESCKLIA----NRGYGFVEYEKHEDAEKARAAF 423
T + V + ++ + LF+ G I SC+++ ++G+GFV + E+AE A A
Sbjct: 153 TNVYVKNFGDHYNKETLEKLFAKFGNITSCEVMTVEGKSKGFGFVAFANPEEAETAVQAL 212
Query: 424 NGLLMQGKTLKVSFALLNPENK---------VSHKPDTES-----NLYISNLPPDMTLER 561
+ ++G LK+ +++ HK + NLY+ NL + +
Sbjct: 213 HDSTIEGTDLKLHVCRAQKKSERHAELKKKHEQHKAERMQKYQGVNLYVKNLDETVDDDG 272
Query: 562 LNTLFSPFGNITNSRV-------SQGIGFVCYETRQQAEDAIKHMNGQ 684
L F +GNIT+++V S+G GFVC+E ++A A+ MN +
Sbjct: 273 LKKQFESYGNITSAKVMTDENGRSKGFGFVCFEKPEEATSAVTEMNSK 320
Score = 36.7 bits (81), Expect = 0.020
Identities = 27/111 (24%), Positives = 52/111 (46%), Gaps = 6/111 (5%)
Frame = +1
Query: 223 GGGDANTNVSPTKLMVNYIPELMTRDMMYALFSAMGKIES---CKLIANR---GYGFVEY 384
G ++ + L V + + +++ FSA G + S C+ A R GY +V +
Sbjct: 21 GQNQTGSSYTMASLYVGDLHPDVNESILFEKFSAAGPVLSIRVCRDNATRLSLGYAYVNF 80
Query: 385 EKHEDAEKARAAFNGLLMQGKTLKVSFALLNPENKVSHKPDTESNLYISNL 537
++ DAE+A N + GK +++ ++ +P + S N++I NL
Sbjct: 81 QQPADAERAMDTMNFEALHGKPMRIMWSQRDPAMRRS----GAGNIFIKNL 127
Score = 35.9 bits (79), Expect = 0.036
Identities = 23/74 (31%), Positives = 37/74 (50%), Gaps = 5/74 (6%)
Frame = +1
Query: 262 LMVNYIPELMTRDMMYALFSAMGKIESCKLIAN-----RGYGFVEYEKHEDAEKARAAFN 426
L V + E + D + F + G I S K++ + +G+GFV +EK E+A A N
Sbjct: 259 LYVKNLDETVDDDGLKKQFESYGNITSAKVMTDENGRSKGFGFVCFEKPEEATSAVTEMN 318
Query: 427 GLLMQGKTLKVSFA 468
++ K L V+ A
Sbjct: 319 SKMVCSKPLYVAIA 332
>Z50874-2|CAA90772.1| 357|Caenorhabditis elegans Hypothetical
protein R10E4.2a protein.
Length = 357
Score = 62.1 bits (144), Expect = 5e-10
Identities = 46/161 (28%), Positives = 81/161 (50%), Gaps = 13/161 (8%)
Frame = +1
Query: 238 NTNVSPTKLMVNYIPELMTRDMMYALFSAMGKIESCKLIANR------GYGFVEYEKHED 399
+T +S T L + + D++ + S G I S K I ++ GYGFV++E
Sbjct: 75 STPLSSTNLYIRGLMPNTNDDLLREMCSKYGNIASTKAIMDKATNNCKGYGFVDFES--- 131
Query: 400 AEKARAAFNGLLMQGKTLKVSFALLNPENKVSHKPDTESNLYISNLPPDMTLERLNTLFS 579
+ A AA +GL +G +++ K+ + +NLYI+NLP D T + L T +
Sbjct: 132 PQAAAAAVDGLNTEGVQAQMA--------KLQQQEQDPTNLYIANLPLDFTEQMLETELN 183
Query: 580 PFGNITNSRV-------SQGIGFVCYETRQQAEDAIKHMNG 681
FG + ++R+ S+G+GF +++++ E I +NG
Sbjct: 184 KFGMVISTRILRTPDNQSRGVGFARMDSKEKCEVIISALNG 224
>Z50110-2|CAA90446.1| 566|Caenorhabditis elegans Hypothetical
protein F18H3.3b protein.
Length = 566
Score = 61.3 bits (142), Expect = 8e-10
Identities = 41/155 (26%), Positives = 72/155 (46%), Gaps = 16/155 (10%)
Frame = +1
Query: 262 LMVNYIPELMTRDMMYALFSAMGKIESCKLIAN-----RGYGFVEYEKHEDAEKARAAFN 426
+ + + ++ +Y FS G I SCK+ + +GYGFV +E A+ A N
Sbjct: 147 IFIKNLDRVIDNKSVYDTFSLFGNILSCKVATDDEGNSKGYGFVHFETEHSAQTAIEKVN 206
Query: 427 GLLMQGKTLKVSFALLNPE----NKVSHKPDTESNLYISNLPPDMTLERLNTLFSPFGNI 594
G+L+ K KV P ++ +N+++ N + E+L+ +FS FG I
Sbjct: 207 GMLLSDK--KVYVGKFQPRAQRMKELGESGLKYTNVFVKNFGEHLDQEKLSAMFSKFGEI 264
Query: 595 TNSRV-------SQGIGFVCYETRQQAEDAIKHMN 678
T++ V +G GFV + + A A++ +N
Sbjct: 265 TSAVVMTDAQGKPKGFGFVAFADQDAAGQAVEKLN 299
Score = 60.9 bits (141), Expect = 1e-09
Identities = 47/169 (27%), Positives = 80/169 (47%), Gaps = 26/169 (15%)
Frame = +1
Query: 256 TKLMVNYIPELMTRDMMYALFSAMGKIESCKLIAN-----RGYGFVEYEKHEDAEKARAA 420
T + V E + ++ + A+FS G+I S ++ + +G+GFV + + A +A
Sbjct: 238 TNVFVKNFGEHLDQEKLSAMFSKFGEITSAVVMTDAQGKPKGFGFVAFADQDAAGQAVEK 297
Query: 421 FNGLLMQGKTLKVSF--ALLNPENKVSHKPDTES------------NLYISNLPPDMTLE 558
N +++G K+S A E K E+ NLY+ N+ D+ +
Sbjct: 298 LNDSILEGTDCKLSVCRAQKKSERSAELKRKYEALKQERVQRYQGVNLYVKNIEEDLNDD 357
Query: 559 RLNTLFSPFGNITNSRV-------SQGIGFVCYETRQQAEDAIKHMNGQ 684
L FS FG IT+++V S+G GFVC+E ++A A+ MN +
Sbjct: 358 GLRDHFSSFGTITSAKVMVDENGRSKGFGFVCFEKPEEATAAVTDMNSK 406
Score = 59.3 bits (137), Expect = 3e-09
Identities = 43/167 (25%), Positives = 81/167 (48%), Gaps = 13/167 (7%)
Frame = +1
Query: 220 NGGGDANTNVSPTKLMVNYIPELMTRDMMYALFSAMGKIESCKLIANR------GYGFVE 381
N G N S L + + ++ M++ FS G + S ++ + GY +V
Sbjct: 45 NIGYPPNATYSMASLYIGDLHPDVSEAMLFEKFSMAGPVLSIRVCRDNTSRLSLGYAYVN 104
Query: 382 YEKHEDAEKARAAFNGLLMQGKTLKVSFALLNPENKVSHKPDTESNLYISNLPPDMTLER 561
+++ DAE+A N ++ G+ +++ ++ +P + + N++I NL + +
Sbjct: 105 FQQPADAERALDTMNFEVIHGRPMRIMWSQRDPAARRAGN----GNIFIKNLDRVIDNKS 160
Query: 562 LNTLFSPFGNITNSRV-------SQGIGFVCYETRQQAEDAIKHMNG 681
+ FS FGNI + +V S+G GFV +ET A+ AI+ +NG
Sbjct: 161 VYDTFSLFGNILSCKVATDDEGNSKGYGFVHFETEHSAQTAIEKVNG 207
Score = 36.7 bits (81), Expect = 0.020
Identities = 25/74 (33%), Positives = 38/74 (51%), Gaps = 5/74 (6%)
Frame = +1
Query: 262 LMVNYIPELMTRDMMYALFSAMGKIESCKLIAN-----RGYGFVEYEKHEDAEKARAAFN 426
L V I E + D + FS+ G I S K++ + +G+GFV +EK E+A A N
Sbjct: 345 LYVKNIEEDLNDDGLRDHFSSFGTITSAKVMVDENGRSKGFGFVCFEKPEEATAAVTDMN 404
Query: 427 GLLMQGKTLKVSFA 468
++ K L V+ A
Sbjct: 405 SKMIGAKPLYVALA 418
>Z50110-1|CAA90444.1| 692|Caenorhabditis elegans Hypothetical
protein F18H3.3a protein.
Length = 692
Score = 61.3 bits (142), Expect = 8e-10
Identities = 41/155 (26%), Positives = 72/155 (46%), Gaps = 16/155 (10%)
Frame = +1
Query: 262 LMVNYIPELMTRDMMYALFSAMGKIESCKLIAN-----RGYGFVEYEKHEDAEKARAAFN 426
+ + + ++ +Y FS G I SCK+ + +GYGFV +E A+ A N
Sbjct: 147 IFIKNLDRVIDNKSVYDTFSLFGNILSCKVATDDEGNSKGYGFVHFETEHSAQTAIEKVN 206
Query: 427 GLLMQGKTLKVSFALLNPE----NKVSHKPDTESNLYISNLPPDMTLERLNTLFSPFGNI 594
G+L+ K KV P ++ +N+++ N + E+L+ +FS FG I
Sbjct: 207 GMLLSDK--KVYVGKFQPRAQRMKELGESGLKYTNVFVKNFGEHLDQEKLSAMFSKFGEI 264
Query: 595 TNSRV-------SQGIGFVCYETRQQAEDAIKHMN 678
T++ V +G GFV + + A A++ +N
Sbjct: 265 TSAVVMTDAQGKPKGFGFVAFADQDAAGQAVEKLN 299
Score = 60.9 bits (141), Expect = 1e-09
Identities = 47/169 (27%), Positives = 80/169 (47%), Gaps = 26/169 (15%)
Frame = +1
Query: 256 TKLMVNYIPELMTRDMMYALFSAMGKIESCKLIAN-----RGYGFVEYEKHEDAEKARAA 420
T + V E + ++ + A+FS G+I S ++ + +G+GFV + + A +A
Sbjct: 238 TNVFVKNFGEHLDQEKLSAMFSKFGEITSAVVMTDAQGKPKGFGFVAFADQDAAGQAVEK 297
Query: 421 FNGLLMQGKTLKVSF--ALLNPENKVSHKPDTES------------NLYISNLPPDMTLE 558
N +++G K+S A E K E+ NLY+ N+ D+ +
Sbjct: 298 LNDSILEGTDCKLSVCRAQKKSERSAELKRKYEALKQERVQRYQGVNLYVKNIEEDLNDD 357
Query: 559 RLNTLFSPFGNITNSRV-------SQGIGFVCYETRQQAEDAIKHMNGQ 684
L FS FG IT+++V S+G GFVC+E ++A A+ MN +
Sbjct: 358 GLRDHFSSFGTITSAKVMVDENGRSKGFGFVCFEKPEEATAAVTDMNSK 406
Score = 59.3 bits (137), Expect = 3e-09
Identities = 43/167 (25%), Positives = 81/167 (48%), Gaps = 13/167 (7%)
Frame = +1
Query: 220 NGGGDANTNVSPTKLMVNYIPELMTRDMMYALFSAMGKIESCKLIANR------GYGFVE 381
N G N S L + + ++ M++ FS G + S ++ + GY +V
Sbjct: 45 NIGYPPNATYSMASLYIGDLHPDVSEAMLFEKFSMAGPVLSIRVCRDNTSRLSLGYAYVN 104
Query: 382 YEKHEDAEKARAAFNGLLMQGKTLKVSFALLNPENKVSHKPDTESNLYISNLPPDMTLER 561
+++ DAE+A N ++ G+ +++ ++ +P + + N++I NL + +
Sbjct: 105 FQQPADAERALDTMNFEVIHGRPMRIMWSQRDPAARRAGN----GNIFIKNLDRVIDNKS 160
Query: 562 LNTLFSPFGNITNSRV-------SQGIGFVCYETRQQAEDAIKHMNG 681
+ FS FGNI + +V S+G GFV +ET A+ AI+ +NG
Sbjct: 161 VYDTFSLFGNILSCKVATDDEGNSKGYGFVHFETEHSAQTAIEKVNG 207
Score = 36.7 bits (81), Expect = 0.020
Identities = 25/74 (33%), Positives = 38/74 (51%), Gaps = 5/74 (6%)
Frame = +1
Query: 262 LMVNYIPELMTRDMMYALFSAMGKIESCKLIAN-----RGYGFVEYEKHEDAEKARAAFN 426
L V I E + D + FS+ G I S K++ + +G+GFV +EK E+A A N
Sbjct: 345 LYVKNIEEDLNDDGLRDHFSSFGTITSAKVMVDENGRSKGFGFVCFEKPEEATAAVTDMN 404
Query: 427 GLLMQGKTLKVSFA 468
++ K L V+ A
Sbjct: 405 SKMIGAKPLYVALA 418
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 58.8 bits (136), Expect = 4e-09
Identities = 42/156 (26%), Positives = 78/156 (50%), Gaps = 15/156 (9%)
Frame = +1
Query: 262 LMVNYIPELMTRDMMYALFSAMGKIESCKLIANR------GYGFVEYEKHEDAEKARAAF 423
+ V + E ++ +++ L G + S + +R G+GFVE+ EDA+ A
Sbjct: 15 IYVGGLDEKVSESILWELMVQAGPVVSVNMPKDRVTANHQGFGFVEFMGEEDADYAIKIL 74
Query: 424 NGLLMQGKTLKVSFALLNPENKVSHKPDTESNLYISNLPPDMTLERLNTLFSPFGNI--- 594
N + + GK +KV+ A + +N D +N+++ NL P++ + L FS FG I
Sbjct: 75 NMIKLYGKPIKVNKASAHEKNM-----DVGANIFVGNLDPEVDEKLLYDTFSAFGVILQV 129
Query: 595 ------TNSRVSQGIGFVCYETRQQAEDAIKHMNGQ 684
+S S+G F+ + + + ++ A++ MNGQ
Sbjct: 130 PKIMRDVDSGTSKGFAFINFASFEASDTALEAMNGQ 165
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 58.8 bits (136), Expect = 4e-09
Identities = 42/156 (26%), Positives = 78/156 (50%), Gaps = 15/156 (9%)
Frame = +1
Query: 262 LMVNYIPELMTRDMMYALFSAMGKIESCKLIANR------GYGFVEYEKHEDAEKARAAF 423
+ V + E ++ +++ L G + S + +R G+GFVE+ EDA+ A
Sbjct: 25 IYVGGLDEKVSESILWELMVQAGPVVSVNMPKDRVTANHQGFGFVEFMGEEDADYAIKIL 84
Query: 424 NGLLMQGKTLKVSFALLNPENKVSHKPDTESNLYISNLPPDMTLERLNTLFSPFGNI--- 594
N + + GK +KV+ A + +N D +N+++ NL P++ + L FS FG I
Sbjct: 85 NMIKLYGKPIKVNKASAHEKNM-----DVGANIFVGNLDPEVDEKLLYDTFSAFGVILQV 139
Query: 595 ------TNSRVSQGIGFVCYETRQQAEDAIKHMNGQ 684
+S S+G F+ + + + ++ A++ MNGQ
Sbjct: 140 PKIMRDVDSGTSKGFAFINFASFEASDTALEAMNGQ 175
>U28944-7|AAN63457.1| 295|Caenorhabditis elegans Hypothetical
protein C18A3.5f protein.
Length = 295
Score = 58.0 bits (134), Expect = 8e-09
Identities = 42/145 (28%), Positives = 69/145 (47%), Gaps = 22/145 (15%)
Frame = +1
Query: 316 FSAMGKIESCKLIAN------RGYGFVEYEKHEDAEKARAAFNGLLMQGKTLKVSFALLN 477
F G + K+I + +GYGFV Y K E+AE+A NG + +T++ ++A
Sbjct: 42 FQPFGDVSDAKVIRDTNTTKSKGYGFVSYPKREEAERAIEQMNGQWLGRRTIRTNWATRK 101
Query: 478 P--ENKVSHKPD------------TESNLYISNLPPDMTLERLNTLFSPFGNITNSRV-- 609
P + K SH + +++Y+ N+ +T + + F+ FG IT R+
Sbjct: 102 PGDQEKPSHYNEKSYDEIYNQTSGDNTSVYVGNI-ASLTEDEIRQGFASFGRITEVRIFK 160
Query: 610 SQGIGFVCYETRQQAEDAIKHMNGQ 684
QG FV ++ + A AI MN Q
Sbjct: 161 MQGYAFVKFDNKDAAAKAIVQMNNQ 185
Score = 48.0 bits (109), Expect = 8e-06
Identities = 26/86 (30%), Positives = 48/86 (55%), Gaps = 8/86 (9%)
Frame = +1
Query: 451 LKVSFALLNPENKVSHKPDTESNLYISNLPPDMTLERLNTLFSPFGNI--------TNSR 606
+KV++A+ + + ++++ +L ++ ++L F PFG++ TN+
Sbjct: 1 MKVNWAVEPGQQQSKIDTTRHFHVFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTT 60
Query: 607 VSQGIGFVCYETRQQAEDAIKHMNGQ 684
S+G GFV Y R++AE AI+ MNGQ
Sbjct: 61 KSKGYGFVSYPKREEAERAIEQMNGQ 86
Score = 34.3 bits (75), Expect = 0.11
Identities = 20/75 (26%), Positives = 38/75 (50%)
Frame = +1
Query: 241 TNVSPTKLMVNYIPELMTRDMMYALFSAMGKIESCKLIANRGYGFVEYEKHEDAEKARAA 420
T+ T + V I L T D + F++ G+I ++ +GY FV+++ + A KA
Sbjct: 123 TSGDNTSVYVGNIASL-TEDEIRQGFASFGRITEVRIFKMQGYAFVKFDNKDAAAKAIVQ 181
Query: 421 FNGLLMQGKTLKVSF 465
N + G+ ++ S+
Sbjct: 182 MNNQDVGGQLVRCSW 196
>U28944-6|AAN63456.1| 305|Caenorhabditis elegans Hypothetical
protein C18A3.5e protein.
Length = 305
Score = 58.0 bits (134), Expect = 8e-09
Identities = 42/145 (28%), Positives = 69/145 (47%), Gaps = 22/145 (15%)
Frame = +1
Query: 316 FSAMGKIESCKLIAN------RGYGFVEYEKHEDAEKARAAFNGLLMQGKTLKVSFALLN 477
F G + K+I + +GYGFV Y K E+AE+A NG + +T++ ++A
Sbjct: 52 FQPFGDVSDAKVIRDTNTTKSKGYGFVSYPKREEAERAIEQMNGQWLGRRTIRTNWATRK 111
Query: 478 P--ENKVSHKPD------------TESNLYISNLPPDMTLERLNTLFSPFGNITNSRV-- 609
P + K SH + +++Y+ N+ +T + + F+ FG IT R+
Sbjct: 112 PGDQEKPSHYNEKSYDEIYNQTSGDNTSVYVGNI-ASLTEDEIRQGFASFGRITEVRIFK 170
Query: 610 SQGIGFVCYETRQQAEDAIKHMNGQ 684
QG FV ++ + A AI MN Q
Sbjct: 171 MQGYAFVKFDNKDAAAKAIVQMNNQ 195
Score = 50.4 bits (115), Expect = 2e-06
Identities = 28/95 (29%), Positives = 52/95 (54%), Gaps = 8/95 (8%)
Frame = +1
Query: 424 NGLLMQGKTLKVSFALLNPENKVSHKPDTESNLYISNLPPDMTLERLNTLFSPFGNI--- 594
N L+ + +KV++A+ + + ++++ +L ++ ++L F PFG++
Sbjct: 2 NKRLLLDREMKVNWAVEPGQQQSKIDTTRHFHVFVGDLSSEVDNQKLREAFQPFGDVSDA 61
Query: 595 -----TNSRVSQGIGFVCYETRQQAEDAIKHMNGQ 684
TN+ S+G GFV Y R++AE AI+ MNGQ
Sbjct: 62 KVIRDTNTTKSKGYGFVSYPKREEAERAIEQMNGQ 96
Score = 34.3 bits (75), Expect = 0.11
Identities = 20/75 (26%), Positives = 38/75 (50%)
Frame = +1
Query: 241 TNVSPTKLMVNYIPELMTRDMMYALFSAMGKIESCKLIANRGYGFVEYEKHEDAEKARAA 420
T+ T + V I L T D + F++ G+I ++ +GY FV+++ + A KA
Sbjct: 133 TSGDNTSVYVGNIASL-TEDEIRQGFASFGRITEVRIFKMQGYAFVKFDNKDAAAKAIVQ 191
Query: 421 FNGLLMQGKTLKVSF 465
N + G+ ++ S+
Sbjct: 192 MNNQDVGGQLVRCSW 206
>U28944-4|AAK68192.1| 376|Caenorhabditis elegans Hypothetical
protein C18A3.5b protein.
Length = 376
Score = 58.0 bits (134), Expect = 8e-09
Identities = 42/145 (28%), Positives = 69/145 (47%), Gaps = 22/145 (15%)
Frame = +1
Query: 316 FSAMGKIESCKLIAN------RGYGFVEYEKHEDAEKARAAFNGLLMQGKTLKVSFALLN 477
F G + K+I + +GYGFV Y K E+AE+A NG + +T++ ++A
Sbjct: 123 FQPFGDVSDAKVIRDTNTTKSKGYGFVSYPKREEAERAIEQMNGQWLGRRTIRTNWATRK 182
Query: 478 P--ENKVSHKPD------------TESNLYISNLPPDMTLERLNTLFSPFGNITNSRV-- 609
P + K SH + +++Y+ N+ +T + + F+ FG IT R+
Sbjct: 183 PGDQEKPSHYNEKSYDEIYNQTSGDNTSVYVGNI-ASLTEDEIRQGFASFGRITEVRIFK 241
Query: 610 SQGIGFVCYETRQQAEDAIKHMNGQ 684
QG FV ++ + A AI MN Q
Sbjct: 242 MQGYAFVKFDNKDAAAKAIVQMNNQ 266
Score = 48.0 bits (109), Expect = 8e-06
Identities = 26/86 (30%), Positives = 48/86 (55%), Gaps = 8/86 (9%)
Frame = +1
Query: 451 LKVSFALLNPENKVSHKPDTESNLYISNLPPDMTLERLNTLFSPFGNI--------TNSR 606
+KV++A+ + + ++++ +L ++ ++L F PFG++ TN+
Sbjct: 82 MKVNWAVEPGQQQSKIDTTRHFHVFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTT 141
Query: 607 VSQGIGFVCYETRQQAEDAIKHMNGQ 684
S+G GFV Y R++AE AI+ MNGQ
Sbjct: 142 KSKGYGFVSYPKREEAERAIEQMNGQ 167
Score = 34.3 bits (75), Expect = 0.11
Identities = 20/75 (26%), Positives = 38/75 (50%)
Frame = +1
Query: 241 TNVSPTKLMVNYIPELMTRDMMYALFSAMGKIESCKLIANRGYGFVEYEKHEDAEKARAA 420
T+ T + V I L T D + F++ G+I ++ +GY FV+++ + A KA
Sbjct: 204 TSGDNTSVYVGNIASL-TEDEIRQGFASFGRITEVRIFKMQGYAFVKFDNKDAAAKAIVQ 262
Query: 421 FNGLLMQGKTLKVSF 465
N + G+ ++ S+
Sbjct: 263 MNNQDVGGQLVRCSW 277
Score = 29.5 bits (63), Expect = 3.1
Identities = 12/35 (34%), Positives = 21/35 (60%)
Frame = +1
Query: 505 DTESNLYISNLPPDMTLERLNTLFSPFGNITNSRV 609
D LY+ NL +T + + TLF+ G++T ++V
Sbjct: 43 DEPRTLYVGNLDSTVTEDFIATLFNQIGSVTKTKV 77
>Z78536-3|CAB01717.2| 360|Caenorhabditis elegans Hypothetical
protein C07A4.1 protein.
Length = 360
Score = 57.6 bits (133), Expect = 1e-08
Identities = 43/151 (28%), Positives = 76/151 (50%), Gaps = 19/151 (12%)
Frame = +1
Query: 289 MTRDMMYALFSAMGKIESCKLIAN------RGYGFVEYEKHEDAEKARAAFNGLLMQGKT 450
++ +++ + F+ G++ K+I + +GYGFV + ++AE A A NG + +
Sbjct: 146 VSNELLKSTFTKFGEVSEAKVIRDVQTQKSKGYGFVSFPNKQNAENAIAGMNGKWIGKRA 205
Query: 451 LKVSFALL--NPENK---------VSHKPDTESNLYISNLPPDMTLERLNTLFSPFGNIT 597
++ ++A + EN+ S K D S +Y+ N+ T L LFS +G+I
Sbjct: 206 VRTNWAARKNSEENRDKLTFEQVFNSTKADNTS-VYVGNISQQTTDADLRDLFSTYGDIA 264
Query: 598 NSRV--SQGIGFVCYETRQQAEDAIKHMNGQ 684
R+ +Q FV YE ++ A AI MNG+
Sbjct: 265 EVRIFKTQRYAFVRYEKKECATKAIMEMNGK 295
Score = 43.6 bits (98), Expect = 2e-04
Identities = 30/104 (28%), Positives = 45/104 (43%), Gaps = 2/104 (1%)
Frame = +1
Query: 238 NTNVSPTKLMVNYIPELMTRDMMYALFSAMGKIESCKLIANRGYGFVEYEKHEDAEKARA 417
+T T + V I + T + LFS G I ++ + Y FV YEK E A KA
Sbjct: 231 STKADNTSVYVGNISQQTTDADLRDLFSTYGDIAEVRIFKTQRYAFVRYEKKECATKAIM 290
Query: 418 AFNGLLMQGKTLKVSFALLN--PENKVSHKPDTESNLYISNLPP 543
NG M G ++ S+ P ++ P S+L + + P
Sbjct: 291 EMNGKEMAGNQVRCSWGRTQAVPNQALNPLPIDLSSLMMPTMLP 334
Score = 42.3 bits (95), Expect = 4e-04
Identities = 29/112 (25%), Positives = 56/112 (50%), Gaps = 8/112 (7%)
Frame = +1
Query: 373 FVEYEKHEDAEKARAAFNGLLMQGKTLKVSFALLNPENKVSHKPDTESNLYISNLPPDMT 552
F E H + + A N +++Q + S + P ++ ++++ +L D++
Sbjct: 91 FCPIEIHSTSTDSHLA-NAIVLQESAVLHSAS--EPPMEMRIDTSKHFHVFVGDLSKDVS 147
Query: 553 LERLNTLFSPFGNITNSRV--------SQGIGFVCYETRQQAEDAIKHMNGQ 684
E L + F+ FG ++ ++V S+G GFV + +Q AE+AI MNG+
Sbjct: 148 NELLKSTFTKFGEVSEAKVIRDVQTQKSKGYGFVSFPNKQNAENAIAGMNGK 199
>Z36238-3|CAA85276.1| 404|Caenorhabditis elegans Hypothetical
protein R74.5a protein.
Length = 404
Score = 52.4 bits (120), Expect = 4e-07
Identities = 27/83 (32%), Positives = 47/83 (56%), Gaps = 4/83 (4%)
Frame = +1
Query: 253 PTKLMVNYIPELMTRDMMYALFSAMGKIESCKLIAN----RGYGFVEYEKHEDAEKARAA 420
P +L V+ IP + A+F +G + ++I N +G+GFV + +DA++ARA
Sbjct: 99 PRRLHVSNIPFKYREPDLTAMFEKVGPVVDVEIIFNERGSKGFGFVTMQNPDDADRARAE 158
Query: 421 FNGLLMQGKTLKVSFALLNPENK 489
FNG ++G+ ++V+ A NK
Sbjct: 159 FNGTTIEGRRVEVNLATQRVHNK 181
Score = 31.5 bits (68), Expect = 0.77
Identities = 23/87 (26%), Positives = 34/87 (39%), Gaps = 6/87 (6%)
Frame = +1
Query: 439 QGKTLKVSFALLNPENKVSHKPDTESNLYISNLPPDMTLERLNTLFSPFGNIT------N 600
Q + L + N + S D L++SN+P L +F G + N
Sbjct: 75 QQQPLTIGPVAPNDRSTSSSSTDGPRRLHVSNIPFKYREPDLTAMFEKVGPVVDVEIIFN 134
Query: 601 SRVSQGIGFVCYETRQQAEDAIKHMNG 681
R S+G GFV + A+ A NG
Sbjct: 135 ERGSKGFGFVTMQNPDDADRARAEFNG 161
>DQ485531-1|ABF22491.1| 404|Caenorhabditis elegans RNA-binding
protein ASD-1 protein.
Length = 404
Score = 52.4 bits (120), Expect = 4e-07
Identities = 27/83 (32%), Positives = 47/83 (56%), Gaps = 4/83 (4%)
Frame = +1
Query: 253 PTKLMVNYIPELMTRDMMYALFSAMGKIESCKLIAN----RGYGFVEYEKHEDAEKARAA 420
P +L V+ IP + A+F +G + ++I N +G+GFV + +DA++ARA
Sbjct: 99 PRRLHVSNIPFKYREPDLTAMFEKVGPVVDVEIIFNERGSKGFGFVTMQNPDDADRARAE 158
Query: 421 FNGLLMQGKTLKVSFALLNPENK 489
FNG ++G+ ++V+ A NK
Sbjct: 159 FNGTTIEGRRVEVNLATQRVHNK 181
Score = 31.5 bits (68), Expect = 0.77
Identities = 23/87 (26%), Positives = 34/87 (39%), Gaps = 6/87 (6%)
Frame = +1
Query: 439 QGKTLKVSFALLNPENKVSHKPDTESNLYISNLPPDMTLERLNTLFSPFGNIT------N 600
Q + L + N + S D L++SN+P L +F G + N
Sbjct: 75 QQQPLTIGPVAPNDRSTSSSSTDGPRRLHVSNIPFKYREPDLTAMFEKVGPVVDVEIIFN 134
Query: 601 SRVSQGIGFVCYETRQQAEDAIKHMNG 681
R S+G GFV + A+ A NG
Sbjct: 135 ERGSKGFGFVTMQNPDDADRARAEFNG 161
>D10877-1|BAA01645.1| 346|Caenorhabditis elegans hnRNP like protein
protein.
Length = 346
Score = 51.2 bits (117), Expect = 9e-07
Identities = 39/165 (23%), Positives = 70/165 (42%), Gaps = 15/165 (9%)
Frame = +1
Query: 217 ENGGGDANTNVSPT-KLMVNYIPELMTRDMMYALFSAMGKIESCKLIAN------RGYGF 375
ENG GDA+ K+ V + T D+M +S G+I ++ + RG+GF
Sbjct: 9 ENGSGDASLEPENLRKIFVGGLTSNTTDDLMREFYSQFGEITDIIVMRDPTTKRSRGFGF 68
Query: 376 VEYEKHEDAEKARAAFNGLLMQGKTLKVSFALLNPENKVSHKPDTESNLYISNLPPDMTL 555
V + + + A ++ GKT+ A+ + S + LY+S + D T
Sbjct: 69 VTFSGKTEVDAAMKQ-RPHIIDGKTVDPKRAVPRDDKNRSESNVSTKRLYVSGVREDHTE 127
Query: 556 ERLNTLFSPFGNITNSRV--------SQGIGFVCYETRQQAEDAI 666
+ L F+ +G +T S + +G GFV ++ + +
Sbjct: 128 DMLTEYFTKYGTVTKSEIILDKATQKPRGFGFVTFDDHDSVDQCV 172
>AF038613-6|ABB51186.1| 347|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform d protein.
Length = 347
Score = 51.2 bits (117), Expect = 9e-07
Identities = 39/165 (23%), Positives = 70/165 (42%), Gaps = 15/165 (9%)
Frame = +1
Query: 217 ENGGGDANTNVSPT-KLMVNYIPELMTRDMMYALFSAMGKIESCKLIAN------RGYGF 375
ENG GDA+ K+ V + T D+M +S G+I ++ + RG+GF
Sbjct: 9 ENGSGDASLEPENLRKIFVGGLTSNTTDDLMREFYSQFGEITDIIVMRDPTTKRSRGFGF 68
Query: 376 VEYEKHEDAEKARAAFNGLLMQGKTLKVSFALLNPENKVSHKPDTESNLYISNLPPDMTL 555
V + + + A ++ GKT+ A+ + S + LY+S + D T
Sbjct: 69 VTFSGKTEVDAAMKQ-RPHIIDGKTVDPKRAVPRDDKNRSESNVSTKRLYVSGVREDHTE 127
Query: 556 ERLNTLFSPFGNITNSRV--------SQGIGFVCYETRQQAEDAI 666
+ L F+ +G +T S + +G GFV ++ + +
Sbjct: 128 DMLTEYFTKYGTVTKSEIILDKATQKPRGFGFVTFDDHDSVDQCV 172
>AF038613-5|AAB92051.1| 346|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform a protein.
Length = 346
Score = 51.2 bits (117), Expect = 9e-07
Identities = 39/165 (23%), Positives = 70/165 (42%), Gaps = 15/165 (9%)
Frame = +1
Query: 217 ENGGGDANTNVSPT-KLMVNYIPELMTRDMMYALFSAMGKIESCKLIAN------RGYGF 375
ENG GDA+ K+ V + T D+M +S G+I ++ + RG+GF
Sbjct: 9 ENGSGDASLEPENLRKIFVGGLTSNTTDDLMREFYSQFGEITDIIVMRDPTTKRSRGFGF 68
Query: 376 VEYEKHEDAEKARAAFNGLLMQGKTLKVSFALLNPENKVSHKPDTESNLYISNLPPDMTL 555
V + + + A ++ GKT+ A+ + S + LY+S + D T
Sbjct: 69 VTFSGKTEVDAAMKQ-RPHIIDGKTVDPKRAVPRDDKNRSESNVSTKRLYVSGVREDHTE 127
Query: 556 ERLNTLFSPFGNITNSRV--------SQGIGFVCYETRQQAEDAI 666
+ L F+ +G +T S + +G GFV ++ + +
Sbjct: 128 DMLTEYFTKYGTVTKSEIILDKATQKPRGFGFVTFDDHDSVDQCV 172
>AL137227-1|CAB70238.2| 611|Caenorhabditis elegans Hypothetical
protein F58D5.1 protein.
Length = 611
Score = 48.0 bits (109), Expect = 8e-06
Identities = 31/93 (33%), Positives = 48/93 (51%), Gaps = 7/93 (7%)
Frame = +1
Query: 259 KLMVNYIPELMTRDMMYALFSAMGKIESCKLI------ANRGYGFVEYEKHEDAEKARAA 420
++ V +IP + D + LF GKI +L+ A+RGY FV Y EDA A
Sbjct: 201 EIYVGHIPTDVFEDTLVPLFEKSGKIWDLRLMMDPMSGASRGYAFVTYCNKEDAAAAAKT 260
Query: 421 FNG-LLMQGKTLKVSFALLNPENKVSHKPDTES 516
++G + GK LKV+ ++ N + + P T+S
Sbjct: 261 YDGHEISTGKPLKVNVSIANTRLFIGNIPKTKS 293
Score = 42.7 bits (96), Expect = 3e-04
Identities = 39/163 (23%), Positives = 75/163 (46%), Gaps = 14/163 (8%)
Frame = +1
Query: 238 NTNVSPTKLMVNYIPELMTRDMMYALFS--AMGKIESC-------KLIANRGYGFVEYEK 390
N +++ T+L + IP+ ++D + A G ++ + I NRG+ FV++
Sbjct: 275 NVSIANTRLFIGNIPKTKSKDEILEELKTHAEGVVDVIVYSVPDNEKIKNRGFCFVDFID 334
Query: 391 HEDAE--KARAAFNGLLMQGKTLKVSFALLNPENKVSHKPDTESN---LYISNLPPDMTL 555
H+ A K + A + + + V +A E++ DT S LYI N+ +T
Sbjct: 335 HKTASDIKRKIAQHKIRPFNADVYVDWA----EHQEEPDEDTMSKVKVLYIRNIKEAVTE 390
Query: 556 ERLNTLFSPFGNITNSRVSQGIGFVCYETRQQAEDAIKHMNGQ 684
E+LN LF + ++ + + F+ + R A++ NG+
Sbjct: 391 EKLNELFKEYASLDRVKKVKDYAFIHFNERDDCLKAMEEWNGK 433
Score = 37.9 bits (84), Expect = 0.009
Identities = 22/91 (24%), Positives = 41/91 (45%)
Frame = +1
Query: 232 DANTNVSPTKLMVNYIPELMTRDMMYALFSAMGKIESCKLIANRGYGFVEYEKHEDAEKA 411
D +T L + I E +T + + LF ++ K + + Y F+ + + +D KA
Sbjct: 369 DEDTMSKVKVLYIRNIKEAVTEEKLNELFKEYASLDRVKKV--KDYAFIHFNERDDCLKA 426
Query: 412 RAAFNGLLMQGKTLKVSFALLNPENKVSHKP 504
+NG ++G ++ S A P + KP
Sbjct: 427 MEEWNGKELEGTVVEASLA--KPPQEKKKKP 455
>AC024791-23|AAM81102.1| 346|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 6, isoform c protein.
Length = 346
Score = 46.4 bits (105), Expect = 3e-05
Identities = 41/168 (24%), Positives = 77/168 (45%), Gaps = 27/168 (16%)
Frame = +1
Query: 256 TKLMVNYIPELMTRDMMYALFSAMGKIESCKLI------ANRGYGFVEYEKHEDAEKARA 417
+++ V I + DM+ F G I+S + ++ + FVEYE E A A+
Sbjct: 102 SRIYVGSISFEIREDMLRRAFDPFGPIKSINMSWDPATGHHKTFAFVEYEVPEAALLAQE 161
Query: 418 AFNGLLMQGKTLKVSFALLN----PENKVSHKP-------DTES--NLYISNLPPDMTLE 558
+ NG ++ G+ LKV+ + P+N +P D + +Y+S++ PD++
Sbjct: 162 SMNGQMLGGRNLKVNSMMFQEMRLPQNMPQAQPIIDMVQKDAKKYFRVYVSSVHPDLSET 221
Query: 559 RLNTLFSPFGNITNSRVS--------QGIGFVCYETRQQAEDAIKHMN 678
L ++F FG I +++ +G G++ + +AI MN
Sbjct: 222 DLKSVFEAFGEIVKCQLARAPTGRGHRGFGYLEFNNLTSQSEAIAGMN 269
Score = 29.5 bits (63), Expect = 3.1
Identities = 18/65 (27%), Positives = 33/65 (50%), Gaps = 6/65 (9%)
Frame = +1
Query: 280 PELMTRDMMYALFSAMGKIESCKLI------ANRGYGFVEYEKHEDAEKARAAFNGLLMQ 441
P+L D+ ++F A G+I C+L +RG+G++E+ +A A N +
Sbjct: 216 PDLSETDLK-SVFEAFGEIVKCQLARAPTGRGHRGFGYLEFNNLTSQSEAIAGMNMFDLG 274
Query: 442 GKTLK 456
G+ L+
Sbjct: 275 GQYLR 279
>AC024791-22|AAF60676.1| 339|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 6, isoform a protein.
Length = 339
Score = 46.4 bits (105), Expect = 3e-05
Identities = 41/168 (24%), Positives = 77/168 (45%), Gaps = 27/168 (16%)
Frame = +1
Query: 256 TKLMVNYIPELMTRDMMYALFSAMGKIESCKLI------ANRGYGFVEYEKHEDAEKARA 417
+++ V I + DM+ F G I+S + ++ + FVEYE E A A+
Sbjct: 102 SRIYVGSISFEIREDMLRRAFDPFGPIKSINMSWDPATGHHKTFAFVEYEVPEAALLAQE 161
Query: 418 AFNGLLMQGKTLKVSFALLN----PENKVSHKP-------DTES--NLYISNLPPDMTLE 558
+ NG ++ G+ LKV+ + P+N +P D + +Y+S++ PD++
Sbjct: 162 SMNGQMLGGRNLKVNSMMFQEMRLPQNMPQAQPIIDMVQKDAKKYFRVYVSSVHPDLSET 221
Query: 559 RLNTLFSPFGNITNSRVS--------QGIGFVCYETRQQAEDAIKHMN 678
L ++F FG I +++ +G G++ + +AI MN
Sbjct: 222 DLKSVFEAFGEIVKCQLARAPTGRGHRGFGYLEFNNLTSQSEAIAGMN 269
Score = 32.7 bits (71), Expect = 0.33
Identities = 20/74 (27%), Positives = 37/74 (50%), Gaps = 6/74 (8%)
Frame = +1
Query: 280 PELMTRDMMYALFSAMGKIESCKLI------ANRGYGFVEYEKHEDAEKARAAFNGLLMQ 441
P+L D+ ++F A G+I C+L +RG+G++E+ +A A N +
Sbjct: 216 PDLSETDLK-SVFEAFGEIVKCQLARAPTGRGHRGFGYLEFNNLTSQSEAIAGMNMFDLG 274
Query: 442 GKTLKVSFALLNPE 483
G+ L+V + P+
Sbjct: 275 GQYLRVGKCVTPPD 288
>AC024791-21|AAF60666.1| 749|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 6, isoform b protein.
Length = 749
Score = 46.4 bits (105), Expect = 3e-05
Identities = 41/168 (24%), Positives = 77/168 (45%), Gaps = 27/168 (16%)
Frame = +1
Query: 256 TKLMVNYIPELMTRDMMYALFSAMGKIESCKLI------ANRGYGFVEYEKHEDAEKARA 417
+++ V I + DM+ F G I+S + ++ + FVEYE E A A+
Sbjct: 102 SRIYVGSISFEIREDMLRRAFDPFGPIKSINMSWDPATGHHKTFAFVEYEVPEAALLAQE 161
Query: 418 AFNGLLMQGKTLKVSFALLN----PENKVSHKP-------DTES--NLYISNLPPDMTLE 558
+ NG ++ G+ LKV+ + P+N +P D + +Y+S++ PD++
Sbjct: 162 SMNGQMLGGRNLKVNSMMFQEMRLPQNMPQAQPIIDMVQKDAKKYFRVYVSSVHPDLSET 221
Query: 559 RLNTLFSPFGNITNSRVS--------QGIGFVCYETRQQAEDAIKHMN 678
L ++F FG I +++ +G G++ + +AI MN
Sbjct: 222 DLKSVFEAFGEIVKCQLARAPTGRGHRGFGYLEFNNLTSQSEAIAGMN 269
Score = 32.7 bits (71), Expect = 0.33
Identities = 20/74 (27%), Positives = 37/74 (50%), Gaps = 6/74 (8%)
Frame = +1
Query: 280 PELMTRDMMYALFSAMGKIESCKLI------ANRGYGFVEYEKHEDAEKARAAFNGLLMQ 441
P+L D+ ++F A G+I C+L +RG+G++E+ +A A N +
Sbjct: 216 PDLSETDLK-SVFEAFGEIVKCQLARAPTGRGHRGFGYLEFNNLTSQSEAIAGMNMFDLG 274
Query: 442 GKTLKVSFALLNPE 483
G+ L+V + P+
Sbjct: 275 GQYLRVGKCVTPPD 288
>U41531-7|AAA83161.2| 415|Caenorhabditis elegans Feminizing gene on
x protein 1 protein.
Length = 415
Score = 46.0 bits (104), Expect = 3e-05
Identities = 28/80 (35%), Positives = 40/80 (50%), Gaps = 6/80 (7%)
Frame = +1
Query: 460 SFALLNPENKVSHKPDTESNLYISNLPPDMTLERLNTLFSPFGNIT------NSRVSQGI 621
S A+ P+ S PD L++SN+P L T+F FG ++ N R S+G
Sbjct: 135 SAAVTQPDPSTSSGPDGPKRLHVSNIPFRFRDPDLKTMFEKFGVVSDVEIIFNERGSKGF 194
Query: 622 GFVCYETRQQAEDAIKHMNG 681
GFV E Q AE A + ++G
Sbjct: 195 GFVTMERPQDAERARQELHG 214
Score = 46.0 bits (104), Expect = 3e-05
Identities = 24/83 (28%), Positives = 45/83 (54%), Gaps = 4/83 (4%)
Frame = +1
Query: 253 PTKLMVNYIPELMTRDMMYALFSAMGKIESCKLIAN----RGYGFVEYEKHEDAEKARAA 420
P +L V+ IP + +F G + ++I N +G+GFV E+ +DAE+AR
Sbjct: 152 PKRLHVSNIPFRFRDPDLKTMFEKFGVVSDVEIIFNERGSKGFGFVTMERPQDAERARQE 211
Query: 421 FNGLLMQGKTLKVSFALLNPENK 489
+G +++G+ ++V+ A +K
Sbjct: 212 LHGSMIEGRKIEVNCATARVHSK 234
>U14946-1|AAA67723.1| 415|Caenorhabditis elegans ribonucleoprotein
protein.
Length = 415
Score = 46.0 bits (104), Expect = 3e-05
Identities = 28/80 (35%), Positives = 40/80 (50%), Gaps = 6/80 (7%)
Frame = +1
Query: 460 SFALLNPENKVSHKPDTESNLYISNLPPDMTLERLNTLFSPFGNIT------NSRVSQGI 621
S A+ P+ S PD L++SN+P L T+F FG ++ N R S+G
Sbjct: 135 SAAVTQPDPSTSSGPDGPKRLHVSNIPFRFRDPDLKTMFEKFGVVSDVEIIFNERGSKGF 194
Query: 622 GFVCYETRQQAEDAIKHMNG 681
GFV E Q AE A + ++G
Sbjct: 195 GFVTMERPQDAERARQELHG 214
Score = 46.0 bits (104), Expect = 3e-05
Identities = 24/83 (28%), Positives = 45/83 (54%), Gaps = 4/83 (4%)
Frame = +1
Query: 253 PTKLMVNYIPELMTRDMMYALFSAMGKIESCKLIAN----RGYGFVEYEKHEDAEKARAA 420
P +L V+ IP + +F G + ++I N +G+GFV E+ +DAE+AR
Sbjct: 152 PKRLHVSNIPFRFRDPDLKTMFEKFGVVSDVEIIFNERGSKGFGFVTMERPQDAERARQE 211
Query: 421 FNGLLMQGKTLKVSFALLNPENK 489
+G +++G+ ++V+ A +K
Sbjct: 212 LHGSMIEGRKIEVNCATARVHSK 234
>Z36238-4|CAD82915.1| 286|Caenorhabditis elegans Hypothetical
protein R74.5b protein.
Length = 286
Score = 45.6 bits (103), Expect = 4e-05
Identities = 21/63 (33%), Positives = 38/63 (60%), Gaps = 4/63 (6%)
Frame = +1
Query: 313 LFSAMGKIESCKLIAN----RGYGFVEYEKHEDAEKARAAFNGLLMQGKTLKVSFALLNP 480
+F +G + ++I N +G+GFV + +DA++ARA FNG ++G+ ++V+ A
Sbjct: 1 MFEKVGPVVDVEIIFNERGSKGFGFVTMQNPDDADRARAEFNGTTIEGRRVEVNLATQRV 60
Query: 481 ENK 489
NK
Sbjct: 61 HNK 63
>AC006833-6|AAF60950.1| 491|Caenorhabditis elegans Hypothetical
protein ZK616.1 protein.
Length = 491
Score = 45.2 bits (102), Expect = 6e-05
Identities = 34/113 (30%), Positives = 54/113 (47%), Gaps = 4/113 (3%)
Frame = +1
Query: 358 NRGYGFVEYEKHEDAEKARAAFNGLLMQGKTLKVSFALLNPENKVSHKPDTESNLYISNL 537
+RG+ FV+ +A A F+GL KV+FA P+ + SN+++ +
Sbjct: 50 HRGFAFVQCRSLAEANVLLAKFSGLFT-----KVNFAKKEPK-PAENVMSNISNVFVRGI 103
Query: 538 PPDMTLERLNTLFSPFGNITNS----RVSQGIGFVCYETRQQAEDAIKHMNGQ 684
DM L + FG IT+ V+ G GFV ++TR A+ I M+G+
Sbjct: 104 SRDMPDTEL---YQAFGGITDGVVQCHVADGYGFVLFDTRANAQKKIVEMDGK 153
>U55363-5|AAA97963.1| 351|Caenorhabditis elegans Spindle
orientation defective protein4 protein.
Length = 351
Score = 44.8 bits (101), Expect = 8e-05
Identities = 29/93 (31%), Positives = 50/93 (53%), Gaps = 11/93 (11%)
Frame = +1
Query: 259 KLMVNYIPELMTRDMMYALFSAMGKIESCKLIAN----RGYGFVEYEKHEDAEKARAAFN 426
++ V+ IP + A+F A G++ S +++ N +G+GFV + E EKARAA +
Sbjct: 52 RIYVSNIPFSFREQDLAAMFFAYGRVLSVEIVTNDRGSKGFGFVTLDSIESCEKARAALH 111
Query: 427 GLLMQGKTLKVSFA-------LLNPENKVSHKP 504
+QG+ ++V A + NP+N+V P
Sbjct: 112 ESHVQGRIIEVRRATPTRRKLINNPQNEVLPPP 144
Score = 35.1 bits (77), Expect = 0.062
Identities = 18/58 (31%), Positives = 31/58 (53%), Gaps = 6/58 (10%)
Frame = +1
Query: 508 TESNLYISNLPPDMTLERLNTLFSPFGN------ITNSRVSQGIGFVCYETRQQAEDA 663
T++ +Y+SN+P + L +F +G +TN R S+G GFV ++ + E A
Sbjct: 49 TDNRIYVSNIPFSFREQDLAAMFFAYGRVLSVEIVTNDRGSKGFGFVTLDSIESCEKA 106
>AB052819-1|BAC65239.1| 351|Caenorhabditis elegans PIP-1 protein.
Length = 351
Score = 44.8 bits (101), Expect = 8e-05
Identities = 29/93 (31%), Positives = 50/93 (53%), Gaps = 11/93 (11%)
Frame = +1
Query: 259 KLMVNYIPELMTRDMMYALFSAMGKIESCKLIAN----RGYGFVEYEKHEDAEKARAAFN 426
++ V+ IP + A+F A G++ S +++ N +G+GFV + E EKARAA +
Sbjct: 52 RIYVSNIPFSFREQDLAAMFFAYGRVLSVEIVTNDRGSKGFGFVTLDSIESCEKARAALH 111
Query: 427 GLLMQGKTLKVSFA-------LLNPENKVSHKP 504
+QG+ ++V A + NP+N+V P
Sbjct: 112 ESHVQGRIIEVRRATPTRRKLINNPQNEVLPPP 144
Score = 35.1 bits (77), Expect = 0.062
Identities = 18/58 (31%), Positives = 31/58 (53%), Gaps = 6/58 (10%)
Frame = +1
Query: 508 TESNLYISNLPPDMTLERLNTLFSPFGN------ITNSRVSQGIGFVCYETRQQAEDA 663
T++ +Y+SN+P + L +F +G +TN R S+G GFV ++ + E A
Sbjct: 49 TDNRIYVSNIPFSFREQDLAAMFFAYGRVLSVEIVTNDRGSKGFGFVTLDSIESCEKA 106
>AF098993-1|AAC67471.2| 367|Caenorhabditis elegans Zinc finger
transcription factorfamily protein 4 protein.
Length = 367
Score = 44.0 bits (99), Expect = 1e-04
Identities = 23/83 (27%), Positives = 41/83 (49%)
Frame = +1
Query: 271 NYIPELMTRDMMYALFSAMGKIESCKLIANRGYGFVEYEKHEDAEKARAAFNGLLMQGKT 450
N ++TRD + LF GKI + A +G+GFV++ + A+++ + NG+ +
Sbjct: 89 NIARAIITRDDIIELFRPFGKIIAVNYFAQQGFGFVQFNEAGSADESCRSLNGMSWKACC 148
Query: 451 LKVSFALLNPENKVSHKPDTESN 519
L V A+L K + + N
Sbjct: 149 LDVHLAMLGSLRKPTGNEGRQGN 171
Score = 31.9 bits (69), Expect = 0.58
Identities = 18/59 (30%), Positives = 31/59 (52%), Gaps = 3/59 (5%)
Frame = +1
Query: 514 SNLYISNLPPDM-TLERLNTLFSPFGNI--TNSRVSQGIGFVCYETRQQAEDAIKHMNG 681
+ ++I N+ + T + + LF PFG I N QG GFV + A+++ + +NG
Sbjct: 83 ARVFIGNIARAIITRDDIIELFRPFGKIIAVNYFAQQGFGFVQFNEAGSADESCRSLNG 141
>AF040642-5|AAN73870.2| 138|Caenorhabditis elegans Hypothetical
protein C50D2.5 protein.
Length = 138
Score = 44.0 bits (99), Expect = 1e-04
Identities = 26/78 (33%), Positives = 41/78 (52%), Gaps = 6/78 (7%)
Frame = +1
Query: 466 ALLNPENKVSH-KPDTESNLYISNLPPDMTLERLNTLFSPFGNITNSRV-----SQGIGF 627
A+ N +N+ + P+ LYI NLP +T E + +F FG + RV ++G F
Sbjct: 2 AMANRQNRGAKLPPEVNRILYIKNLPYKITTEEMYEIFGKFGAVRQIRVGNTAETRGTAF 61
Query: 628 VCYETRQQAEDAIKHMNG 681
V YE A+ A +H++G
Sbjct: 62 VVYEDIFDAKTACEHLSG 79
>U80455-2|AAB37882.2| 420|Caenorhabditis elegans Elav-type rna
binding protein familyprotein 1, isoform b protein.
Length = 420
Score = 43.2 bits (97), Expect = 2e-04
Identities = 26/64 (40%), Positives = 35/64 (54%), Gaps = 8/64 (12%)
Frame = +1
Query: 514 SNLYISNLPPDMTLERLNTLFSPFGNITNSRV--------SQGIGFVCYETRQQAEDAIK 669
+NL+I +LP D L F+PFG I +++V S+ GFV YE Q A +AI
Sbjct: 335 ANLFIYHLPQDFGDSDLINTFAPFGGILSAKVFIDKVTNLSKCFGFVSYENAQSATNAIS 394
Query: 670 HMNG 681
MNG
Sbjct: 395 AMNG 398
Score = 34.3 bits (75), Expect = 0.11
Identities = 27/97 (27%), Positives = 42/97 (43%), Gaps = 8/97 (8%)
Frame = +1
Query: 223 GGGDANTNVSPTKLMVNYIPELMTRDMMYALFSAMGKIESCKLIANRG------YGFVEY 384
G GD L + ++P+ + F+ G I S K+ ++ +GFV Y
Sbjct: 325 GNGDVK-GPDGANLFIYHLPQDFGDSDLINTFAPFGGILSAKVFIDKVTNLSKCFGFVSY 383
Query: 385 EKHEDAEKARAAFNGLLMQGKTLKVSFAL--LNPENK 489
E + A A +A NG + K LKV + NP N+
Sbjct: 384 ENAQSATNAISAMNGFQIGSKRLKVQLKVDRGNPYNR 420
>U80455-1|AAB37881.1| 584|Caenorhabditis elegans Elav-type rna
binding protein familyprotein 1, isoform a protein.
Length = 584
Score = 43.2 bits (97), Expect = 2e-04
Identities = 26/64 (40%), Positives = 35/64 (54%), Gaps = 8/64 (12%)
Frame = +1
Query: 514 SNLYISNLPPDMTLERLNTLFSPFGNITNSRV--------SQGIGFVCYETRQQAEDAIK 669
+NL+I +LP D L F+PFG I +++V S+ GFV YE Q A +AI
Sbjct: 499 ANLFIYHLPQDFGDSDLINTFAPFGGILSAKVFIDKVTNLSKCFGFVSYENAQSATNAIS 558
Query: 670 HMNG 681
MNG
Sbjct: 559 AMNG 562
Score = 34.3 bits (75), Expect = 0.11
Identities = 27/97 (27%), Positives = 42/97 (43%), Gaps = 8/97 (8%)
Frame = +1
Query: 223 GGGDANTNVSPTKLMVNYIPELMTRDMMYALFSAMGKIESCKLIANRG------YGFVEY 384
G GD L + ++P+ + F+ G I S K+ ++ +GFV Y
Sbjct: 489 GNGDVK-GPDGANLFIYHLPQDFGDSDLINTFAPFGGILSAKVFIDKVTNLSKCFGFVSY 547
Query: 385 EKHEDAEKARAAFNGLLMQGKTLKVSFAL--LNPENK 489
E + A A +A NG + K LKV + NP N+
Sbjct: 548 ENAQSATNAISAMNGFQIGSKRLKVQLKVDRGNPYNR 584
>U53931-1|AAA98566.1| 584|Caenorhabditis elegans elav-type
ribonucleoprotein protein.
Length = 584
Score = 43.2 bits (97), Expect = 2e-04
Identities = 26/64 (40%), Positives = 35/64 (54%), Gaps = 8/64 (12%)
Frame = +1
Query: 514 SNLYISNLPPDMTLERLNTLFSPFGNITNSRV--------SQGIGFVCYETRQQAEDAIK 669
+NL+I +LP D L F+PFG I +++V S+ GFV YE Q A +AI
Sbjct: 499 ANLFIYHLPQDFGDSDLINTFAPFGGILSAKVFIDKVTNLSKCFGFVSYENAQSATNAIS 558
Query: 670 HMNG 681
MNG
Sbjct: 559 AMNG 562
Score = 34.3 bits (75), Expect = 0.11
Identities = 27/97 (27%), Positives = 42/97 (43%), Gaps = 8/97 (8%)
Frame = +1
Query: 223 GGGDANTNVSPTKLMVNYIPELMTRDMMYALFSAMGKIESCKLIANRG------YGFVEY 384
G GD L + ++P+ + F+ G I S K+ ++ +GFV Y
Sbjct: 489 GNGDVK-GPDGANLFIYHLPQDFGDSDLINTFAPFGGILSAKVFIDKVTNLSKCFGFVSY 547
Query: 385 EKHEDAEKARAAFNGLLMQGKTLKVSFAL--LNPENK 489
E + A A +A NG + K LKV + NP N+
Sbjct: 548 ENAQSATNAISAMNGFQIGSKRLKVQLKVDRGNPYNR 584
>EF523770-1|ABS18836.1| 513|Caenorhabditis elegans ELAV-type RNA
binding protein variantE protein.
Length = 513
Score = 43.2 bits (97), Expect = 2e-04
Identities = 26/64 (40%), Positives = 35/64 (54%), Gaps = 8/64 (12%)
Frame = +1
Query: 514 SNLYISNLPPDMTLERLNTLFSPFGNITNSRV--------SQGIGFVCYETRQQAEDAIK 669
+NL+I +LP D L F+PFG I +++V S+ GFV YE Q A +AI
Sbjct: 428 ANLFIYHLPQDFGDSDLINTFAPFGGILSAKVFIDKVTNLSKCFGFVSYENAQSATNAIS 487
Query: 670 HMNG 681
MNG
Sbjct: 488 AMNG 491
Score = 34.3 bits (75), Expect = 0.11
Identities = 27/97 (27%), Positives = 42/97 (43%), Gaps = 8/97 (8%)
Frame = +1
Query: 223 GGGDANTNVSPTKLMVNYIPELMTRDMMYALFSAMGKIESCKLIANRG------YGFVEY 384
G GD L + ++P+ + F+ G I S K+ ++ +GFV Y
Sbjct: 418 GNGDVK-GPDGANLFIYHLPQDFGDSDLINTFAPFGGILSAKVFIDKVTNLSKCFGFVSY 476
Query: 385 EKHEDAEKARAAFNGLLMQGKTLKVSFAL--LNPENK 489
E + A A +A NG + K LKV + NP N+
Sbjct: 477 ENAQSATNAISAMNGFQIGSKRLKVQLKVDRGNPYNR 513
>EF523766-1|ABS18832.1| 584|Caenorhabditis elegans ELAV-type RNA
binding protein variantA protein.
Length = 584
Score = 43.2 bits (97), Expect = 2e-04
Identities = 26/64 (40%), Positives = 35/64 (54%), Gaps = 8/64 (12%)
Frame = +1
Query: 514 SNLYISNLPPDMTLERLNTLFSPFGNITNSRV--------SQGIGFVCYETRQQAEDAIK 669
+NL+I +LP D L F+PFG I +++V S+ GFV YE Q A +AI
Sbjct: 499 ANLFIYHLPQDFGDSDLINTFAPFGGILSAKVFIDKVTNLSKCFGFVSYENAQSATNAIS 558
Query: 670 HMNG 681
MNG
Sbjct: 559 AMNG 562
Score = 34.3 bits (75), Expect = 0.11
Identities = 27/97 (27%), Positives = 42/97 (43%), Gaps = 8/97 (8%)
Frame = +1
Query: 223 GGGDANTNVSPTKLMVNYIPELMTRDMMYALFSAMGKIESCKLIANRG------YGFVEY 384
G GD L + ++P+ + F+ G I S K+ ++ +GFV Y
Sbjct: 489 GNGDVK-GPDGANLFIYHLPQDFGDSDLINTFAPFGGILSAKVFIDKVTNLSKCFGFVSY 547
Query: 385 EKHEDAEKARAAFNGLLMQGKTLKVSFAL--LNPENK 489
E + A A +A NG + K LKV + NP N+
Sbjct: 548 ENAQSATNAISAMNGFQIGSKRLKVQLKVDRGNPYNR 584
>Z77669-6|CAB01243.2| 371|Caenorhabditis elegans Hypothetical
protein T07F10.3 protein.
Length = 371
Score = 42.3 bits (95), Expect = 4e-04
Identities = 28/114 (24%), Positives = 57/114 (50%), Gaps = 8/114 (7%)
Frame = +1
Query: 361 RGYGFVEYEKHEDAEKARAAFNGLLMQG-KTLKVSFALLNPENKVSHKPDTESNLYISNL 537
+GY F+E+ ++A + NG + G K ++ + N S+ P++E NL++S++
Sbjct: 108 KGYCFIEFITFDEARQTLYDLNGNRIPGFKDIRFNLCFAND----SYNPNSEFNLHVSSV 163
Query: 538 PPDMTLERLNTLFSPFGNITNSRV-------SQGIGFVCYETRQQAEDAIKHMN 678
P DM L +F + + +++ S+G GFV + + + A+ M+
Sbjct: 164 PDDMADAELYRIFDKYQSCRGAKMFRFVDGSSKGSGFVRFGNQTDQQMALVEMH 217
>U41007-10|AAL32214.1| 118|Caenorhabditis elegans Sr protein
(splicing factor) protein6, isoform c protein.
Length = 118
Score = 41.5 bits (93), Expect = 7e-04
Identities = 20/60 (33%), Positives = 33/60 (55%), Gaps = 3/60 (5%)
Frame = +1
Query: 511 ESNLYISNLPPDMTLERLNTLFSPFGNITN---SRVSQGIGFVCYETRQQAEDAIKHMNG 681
++ +Y+ LP D T + L +F FG I +R G FV Y+ + AEDA++ ++G
Sbjct: 2 DAKVYVGGLPSDATSQELEEIFDRFGRIRKVWVARRPPGFAFVEYDDVRDAEDAVRALDG 61
Score = 33.1 bits (72), Expect = 0.25
Identities = 22/72 (30%), Positives = 34/72 (47%), Gaps = 2/72 (2%)
Frame = +1
Query: 259 KLMVNYIPELMTRDMMYALFSAMGKIESCKLIANR--GYGFVEYEKHEDAEKARAAFNGL 432
K+ V +P T + +F G+I +A R G+ FVEY+ DAE A A +G
Sbjct: 4 KVYVGGLPSDATSQELEEIFDRFGRIRKV-WVARRPPGFAFVEYDDVRDAEDAVRALDGS 62
Query: 433 LMQGKTLKVSFA 468
+ G +V +
Sbjct: 63 RICGVRARVELS 74
>U41007-9|AAL32213.1| 153|Caenorhabditis elegans Sr protein
(splicing factor) protein6, isoform b protein.
Length = 153
Score = 41.5 bits (93), Expect = 7e-04
Identities = 20/60 (33%), Positives = 33/60 (55%), Gaps = 3/60 (5%)
Frame = +1
Query: 511 ESNLYISNLPPDMTLERLNTLFSPFGNITN---SRVSQGIGFVCYETRQQAEDAIKHMNG 681
++ +Y+ LP D T + L +F FG I +R G FV Y+ + AEDA++ ++G
Sbjct: 2 DAKVYVGGLPSDATSQELEEIFDRFGRIRKVWVARRPPGFAFVEYDDVRDAEDAVRALDG 61
Score = 33.1 bits (72), Expect = 0.25
Identities = 22/72 (30%), Positives = 34/72 (47%), Gaps = 2/72 (2%)
Frame = +1
Query: 259 KLMVNYIPELMTRDMMYALFSAMGKIESCKLIANR--GYGFVEYEKHEDAEKARAAFNGL 432
K+ V +P T + +F G+I +A R G+ FVEY+ DAE A A +G
Sbjct: 4 KVYVGGLPSDATSQELEEIFDRFGRIRKV-WVARRPPGFAFVEYDDVRDAEDAVRALDGS 62
Query: 433 LMQGKTLKVSFA 468
+ G +V +
Sbjct: 63 RICGVRARVELS 74
>U41007-8|AAA82270.1| 179|Caenorhabditis elegans Sr protein
(splicing factor) protein6, isoform a protein.
Length = 179
Score = 41.5 bits (93), Expect = 7e-04
Identities = 20/60 (33%), Positives = 33/60 (55%), Gaps = 3/60 (5%)
Frame = +1
Query: 511 ESNLYISNLPPDMTLERLNTLFSPFGNITN---SRVSQGIGFVCYETRQQAEDAIKHMNG 681
++ +Y+ LP D T + L +F FG I +R G FV Y+ + AEDA++ ++G
Sbjct: 2 DAKVYVGGLPSDATSQELEEIFDRFGRIRKVWVARRPPGFAFVEYDDVRDAEDAVRALDG 61
Score = 33.1 bits (72), Expect = 0.25
Identities = 22/72 (30%), Positives = 34/72 (47%), Gaps = 2/72 (2%)
Frame = +1
Query: 259 KLMVNYIPELMTRDMMYALFSAMGKIESCKLIANR--GYGFVEYEKHEDAEKARAAFNGL 432
K+ V +P T + +F G+I +A R G+ FVEY+ DAE A A +G
Sbjct: 4 KVYVGGLPSDATSQELEEIFDRFGRIRKV-WVARRPPGFAFVEYDDVRDAEDAVRALDGS 62
Query: 433 LMQGKTLKVSFA 468
+ G +V +
Sbjct: 63 RICGVRARVELS 74
>U79157-1|AAC26982.1| 496|Caenorhabditis elegans splicing factor
U2AF65 protein.
Length = 496
Score = 40.7 bits (91), Expect = 0.001
Identities = 24/94 (25%), Positives = 44/94 (46%), Gaps = 5/94 (5%)
Frame = +1
Query: 250 SPTKLMVNYIPELMTRDMMYALFSAMGKIESCKLIAN-----RGYGFVEYEKHEDAEKAR 414
S K+ + +P +T D + L + G +++ L + +GY F EY ++A
Sbjct: 289 SANKIFIGGLPNYLTEDQVKELLCSFGPLKAFSLNVDSQGNSKGYAFAEYLDPTLTDQAI 348
Query: 415 AAFNGLLMQGKTLKVSFALLNPENKVSHKPDTES 516
A NG+ + K L V A N + ++ P++ S
Sbjct: 349 AGLNGMQLGDKQLVVQLACANQQRHNTNLPNSAS 382
>AC024875-3|AAK29989.1| 496|Caenorhabditis elegans U2af splicing
factor protein 1,isoform a protein.
Length = 496
Score = 40.7 bits (91), Expect = 0.001
Identities = 24/94 (25%), Positives = 44/94 (46%), Gaps = 5/94 (5%)
Frame = +1
Query: 250 SPTKLMVNYIPELMTRDMMYALFSAMGKIESCKLIAN-----RGYGFVEYEKHEDAEKAR 414
S K+ + +P +T D + L + G +++ L + +GY F EY ++A
Sbjct: 289 SANKIFIGGLPNYLTEDQVKELLCSFGPLKAFSLNVDSQGNSKGYAFAEYLDPTLTDQAI 348
Query: 415 AAFNGLLMQGKTLKVSFALLNPENKVSHKPDTES 516
A NG+ + K L V A N + ++ P++ S
Sbjct: 349 AGLNGMQLGDKQLVVQLACANQQRHNTNLPNSAS 382
>AC024875-2|AAM44400.1| 471|Caenorhabditis elegans U2af splicing
factor protein 1,isoform d protein.
Length = 471
Score = 40.7 bits (91), Expect = 0.001
Identities = 24/94 (25%), Positives = 44/94 (46%), Gaps = 5/94 (5%)
Frame = +1
Query: 250 SPTKLMVNYIPELMTRDMMYALFSAMGKIESCKLIAN-----RGYGFVEYEKHEDAEKAR 414
S K+ + +P +T D + L + G +++ L + +GY F EY ++A
Sbjct: 264 SANKIFIGGLPNYLTEDQVKELLCSFGPLKAFSLNVDSQGNSKGYAFAEYLDPTLTDQAI 323
Query: 415 AAFNGLLMQGKTLKVSFALLNPENKVSHKPDTES 516
A NG+ + K L V A N + ++ P++ S
Sbjct: 324 AGLNGMQLGDKQLVVQLACANQQRHNTNLPNSAS 357
>AC024875-1|AAL00879.1| 474|Caenorhabditis elegans U2af splicing
factor protein 1,isoform c protein.
Length = 474
Score = 40.7 bits (91), Expect = 0.001
Identities = 24/94 (25%), Positives = 44/94 (46%), Gaps = 5/94 (5%)
Frame = +1
Query: 250 SPTKLMVNYIPELMTRDMMYALFSAMGKIESCKLIAN-----RGYGFVEYEKHEDAEKAR 414
S K+ + +P +T D + L + G +++ L + +GY F EY ++A
Sbjct: 267 SANKIFIGGLPNYLTEDQVKELLCSFGPLKAFSLNVDSQGNSKGYAFAEYLDPTLTDQAI 326
Query: 415 AAFNGLLMQGKTLKVSFALLNPENKVSHKPDTES 516
A NG+ + K L V A N + ++ P++ S
Sbjct: 327 AGLNGMQLGDKQLVVQLACANQQRHNTNLPNSAS 360
>Z73102-13|CAA97405.1| 836|Caenorhabditis elegans Hypothetical
protein B0035.12 protein.
Length = 836
Score = 40.3 bits (90), Expect = 0.002
Identities = 30/115 (26%), Positives = 59/115 (51%), Gaps = 10/115 (8%)
Frame = +1
Query: 352 IANRGYGFVEYEKHEDAEKARAAFNGLLMQGKTLKVSFALLNPENKVSHKPDT---ESNL 522
+ +RG+ +V E + A++A + + ++G+ + +S +PE +V K T +S +
Sbjct: 629 LVHRGFAYVVMENDQKAQQALLK-DRVPVKGRPMFISAN--DPEKRVGFKFSTTLEKSKV 685
Query: 523 YISNLPPDMTLERLNTLFSPFGNITNSR-------VSQGIGFVCYETRQQAEDAI 666
++ N+ T + L LFS FG +T+ R +GI FV ++T A+ +
Sbjct: 686 FVRNVHFQATDDELKALFSKFGTVTSVRRVTHKDGKPKGIAFVDFDTEASAQKCV 740
>AF038613-8|AAL02515.2| 309|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform b protein.
Length = 309
Score = 40.3 bits (90), Expect = 0.002
Identities = 25/111 (22%), Positives = 48/111 (43%), Gaps = 8/111 (7%)
Frame = +1
Query: 358 NRGYGFVEYEKHEDAEKARAAFNGLLMQGKTLKVSFALLNPENKVSHKPDTESNLYISNL 537
+RG+GFV + + + A ++ GKT+ A+ + S + LY+S +
Sbjct: 25 SRGFGFVTFSGKTEVDAAMKQ-RPHIIDGKTVDPKRAVPRDDKNRSESNVSTKRLYVSGV 83
Query: 538 PPDMTLERLNTLFSPFGNITNSRV--------SQGIGFVCYETRQQAEDAI 666
D T + L F+ +G +T S + +G GFV ++ + +
Sbjct: 84 REDHTEDMLTEYFTKYGTVTKSEIILDKATQKPRGFGFVTFDDHDSVDQCV 134
Score = 36.7 bits (81), Expect = 0.020
Identities = 22/78 (28%), Positives = 41/78 (52%), Gaps = 6/78 (7%)
Frame = +1
Query: 193 KRTMQNDMENGGGDANTNVSPTKLMVNYIPELMTRDMMYALFSAMGKIESCKLIAN---- 360
KR + D +N + +NVS +L V+ + E T DM+ F+ G + ++I +
Sbjct: 58 KRAVPRDDKNR---SESNVSTKRLYVSGVREDHTEDMLTEYFTKYGTVTKSEIILDKATQ 114
Query: 361 --RGYGFVEYEKHEDAEK 408
RG+GFV ++ H+ ++
Sbjct: 115 KPRGFGFVTFDDHDSVDQ 132
>AF038613-7|ABB51185.1| 308|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform c protein.
Length = 308
Score = 40.3 bits (90), Expect = 0.002
Identities = 25/111 (22%), Positives = 48/111 (43%), Gaps = 8/111 (7%)
Frame = +1
Query: 358 NRGYGFVEYEKHEDAEKARAAFNGLLMQGKTLKVSFALLNPENKVSHKPDTESNLYISNL 537
+RG+GFV + + + A ++ GKT+ A+ + S + LY+S +
Sbjct: 25 SRGFGFVTFSGKTEVDAAMKQ-RPHIIDGKTVDPKRAVPRDDKNRSESNVSTKRLYVSGV 83
Query: 538 PPDMTLERLNTLFSPFGNITNSRV--------SQGIGFVCYETRQQAEDAI 666
D T + L F+ +G +T S + +G GFV ++ + +
Sbjct: 84 REDHTEDMLTEYFTKYGTVTKSEIILDKATQKPRGFGFVTFDDHDSVDQCV 134
Score = 36.7 bits (81), Expect = 0.020
Identities = 22/78 (28%), Positives = 41/78 (52%), Gaps = 6/78 (7%)
Frame = +1
Query: 193 KRTMQNDMENGGGDANTNVSPTKLMVNYIPELMTRDMMYALFSAMGKIESCKLIAN---- 360
KR + D +N + +NVS +L V+ + E T DM+ F+ G + ++I +
Sbjct: 58 KRAVPRDDKNR---SESNVSTKRLYVSGVREDHTEDMLTEYFTKYGTVTKSEIILDKATQ 114
Query: 361 --RGYGFVEYEKHEDAEK 408
RG+GFV ++ H+ ++
Sbjct: 115 KPRGFGFVTFDDHDSVDQ 132
>AL132904-14|CAC35847.2| 258|Caenorhabditis elegans Hypothetical
protein Y111B2A.18 protein.
Length = 258
Score = 39.5 bits (88), Expect = 0.003
Identities = 22/71 (30%), Positives = 37/71 (52%), Gaps = 2/71 (2%)
Frame = +1
Query: 259 KLMVNYIPELMTRDMMYALFSAMGKIESCKLIANRG--YGFVEYEKHEDAEKARAAFNGL 432
K+ V +P + + +F G+I+ + + RG + FVE+E H DAE A A +G
Sbjct: 10 KVYVGNLPGDVREKEVEDIFHKYGRIKYVDIKSGRGPAFAFVEFEDHRDAEDAVRARDGY 69
Query: 433 LMQGKTLKVSF 465
G+ ++V F
Sbjct: 70 EFDGRRIRVEF 80
>AF242767-1|AAG36874.1| 258|Caenorhabditis elegans SF2 protein.
Length = 258
Score = 39.5 bits (88), Expect = 0.003
Identities = 22/71 (30%), Positives = 37/71 (52%), Gaps = 2/71 (2%)
Frame = +1
Query: 259 KLMVNYIPELMTRDMMYALFSAMGKIESCKLIANRG--YGFVEYEKHEDAEKARAAFNGL 432
K+ V +P + + +F G+I+ + + RG + FVE+E H DAE A A +G
Sbjct: 10 KVYVGNLPGDVREKEVEDIFHKYGRIKYVDIKSGRGPAFAFVEFEDHRDAEDAVRARDGY 69
Query: 433 LMQGKTLKVSF 465
G+ ++V F
Sbjct: 70 EFDGRRIRVEF 80
>Z83230-6|CAB05746.1| 336|Caenorhabditis elegans Hypothetical
protein F56A8.6 protein.
Length = 336
Score = 39.1 bits (87), Expect = 0.004
Identities = 24/79 (30%), Positives = 40/79 (50%), Gaps = 6/79 (7%)
Frame = +1
Query: 250 SPTKLMVNYIPELMTRDMMYALFSAMGKIESCKLIANR------GYGFVEYEKHEDAEKA 411
S + V I ++ D + ++FS G + S K++ +R GYGF+E+ + AE A
Sbjct: 16 SQRSVFVGNISYDVSEDTIRSIFSKAGNVLSIKMVHDRETGKPKGYGFIEFPDIQTAEVA 75
Query: 412 RAAFNGLLMQGKTLKVSFA 468
NG + G+ L+V A
Sbjct: 76 IRNLNGYELSGRILRVDSA 94
Score = 33.1 bits (72), Expect = 0.25
Identities = 16/66 (24%), Positives = 39/66 (59%), Gaps = 8/66 (12%)
Frame = +1
Query: 508 TESNLYISNLPPDMTLERLNTLFSPFGNITNSRV--------SQGIGFVCYETRQQAEDA 663
++ ++++ N+ D++ + + ++FS GN+ + ++ +G GF+ + Q AE A
Sbjct: 16 SQRSVFVGNISYDVSEDTIRSIFSKAGNVLSIKMVHDRETGKPKGYGFIEFPDIQTAEVA 75
Query: 664 IKHMNG 681
I+++NG
Sbjct: 76 IRNLNG 81
>U23172-15|AAN63408.1| 374|Caenorhabditis elegans Hypothetical
protein F25B5.7d protein.
Length = 374
Score = 39.1 bits (87), Expect = 0.004
Identities = 20/56 (35%), Positives = 33/56 (58%), Gaps = 1/56 (1%)
Frame = +1
Query: 520 LYISNLPPDMTLERLNTLFSPFGNITNSRVS-QGIGFVCYETRQQAEDAIKHMNGQ 684
L++ NLP ++ L LFSP G+I +S +G F+ +TR AE A + ++G+
Sbjct: 118 LFVGNLPNEVKETELKELFSPHGDIAECYLSGKGFAFLRLDTRAHAESAKEAIDGR 173
>U23172-12|ABH03526.1| 562|Caenorhabditis elegans Hypothetical
protein F25B5.7a protein.
Length = 562
Score = 39.1 bits (87), Expect = 0.004
Identities = 20/56 (35%), Positives = 33/56 (58%), Gaps = 1/56 (1%)
Frame = +1
Query: 520 LYISNLPPDMTLERLNTLFSPFGNITNSRVS-QGIGFVCYETRQQAEDAIKHMNGQ 684
L++ NLP ++ L LFSP G+I +S +G F+ +TR AE A + ++G+
Sbjct: 118 LFVGNLPNEVKETELKELFSPHGDIAECYLSGKGFAFLRLDTRAHAESAKEAIDGR 173
>Z81106-3|CAB03222.1| 84|Caenorhabditis elegans Hypothetical
protein R06C1.4 protein.
Length = 84
Score = 38.7 bits (86), Expect = 0.005
Identities = 19/73 (26%), Positives = 40/73 (54%), Gaps = 6/73 (8%)
Frame = +1
Query: 268 VNYIPELMTRDMMYALFSAMGKIESCKLIANR------GYGFVEYEKHEDAEKARAAFNG 429
V +P T + + F+A+G + + +++ +R G+ FVE+ + A++A NG
Sbjct: 10 VGNVPYQGTEEEIGNYFAAVGHVNNVRIVYDRETGRPRGFAFVEFSEEAGAQRAVEQLNG 69
Query: 430 LLMQGKTLKVSFA 468
+ G+ L+V++A
Sbjct: 70 VAFNGRNLRVNYA 82
>AL117204-22|CAB55151.1| 331|Caenorhabditis elegans Hypothetical
protein Y116A8C.34 protein.
Length = 331
Score = 38.7 bits (86), Expect = 0.005
Identities = 20/49 (40%), Positives = 29/49 (59%)
Frame = +1
Query: 358 NRGYGFVEYEKHEDAEKARAAFNGLLMQGKTLKVSFALLNPENKVSHKP 504
+RG+GFVE++ EDA A N + GKT++V+FA + S KP
Sbjct: 51 HRGFGFVEFDMAEDAAMAIDNMNESELFGKTIRVNFARPPKATERSQKP 99
Score = 29.9 bits (64), Expect = 2.3
Identities = 19/61 (31%), Positives = 29/61 (47%), Gaps = 8/61 (13%)
Frame = +1
Query: 520 LYISNLPPDMTLERLNTLFSPFGNIT--------NSRVSQGIGFVCYETRQQAEDAIKHM 675
LY+ D+T + L F PFG++ S +G GFV ++ + A AI +M
Sbjct: 13 LYVGGFTEDVTEKVLMAAFIPFGDVVAISIPMDYESGKHRGFGFVEFDMAEDAAMAIDNM 72
Query: 676 N 678
N
Sbjct: 73 N 73
>Z83127-4|CAB05631.1| 872|Caenorhabditis elegans Hypothetical
protein T23F6.4 protein.
Length = 872
Score = 38.3 bits (85), Expect = 0.007
Identities = 26/95 (27%), Positives = 46/95 (48%), Gaps = 8/95 (8%)
Frame = +1
Query: 364 GYGFVEYEKHEDAEKARAAFNGLLMQGKTLKVSFALLNPENK-------VSHKPDTE-SN 519
G+GFV++ DA+ A G L+ G +L++ + +K V K E +
Sbjct: 690 GFGFVQFYTAFDAKTALKDMQGELLDGHSLELKISHRENADKGALKRKEVKQKEQGECTK 749
Query: 520 LYISNLPPDMTLERLNTLFSPFGNITNSRVSQGIG 624
L + NLP + +++ + TLF FG + R+ + G
Sbjct: 750 LLVRNLPFEASVKEVETLFETFGAVKTIRIPKKPG 784
>Z66521-4|CAD59160.1| 150|Caenorhabditis elegans Hypothetical
protein W02B12.3c protein.
Length = 150
Score = 38.3 bits (85), Expect = 0.007
Identities = 16/57 (28%), Positives = 32/57 (56%)
Frame = +1
Query: 514 SNLYISNLPPDMTLERLNTLFSPFGNITNSRVSQGIGFVCYETRQQAEDAIKHMNGQ 684
+ +YI L ++ + + F +G I + + G GFV ++ ++ AEDA+ +NG+
Sbjct: 3 ARIYIGRLTSRVSEKDIEHFFRGYGQIRDVLLKNGFGFVEFDDKRDAEDAVHDLNGK 59
Score = 29.9 bits (64), Expect = 2.3
Identities = 15/51 (29%), Positives = 27/51 (52%)
Frame = +1
Query: 316 FSAMGKIESCKLIANRGYGFVEYEKHEDAEKARAAFNGLLMQGKTLKVSFA 468
F G+I ++ G+GFVE++ DAE A NG + G+ + + ++
Sbjct: 23 FRGYGQIRD--VLLKNGFGFVEFDDKRDAEDAVHDLNGKELGGERVILDYS 71
>Z66521-3|CAD59159.1| 148|Caenorhabditis elegans Hypothetical
protein W02B12.3b protein.
Length = 148
Score = 38.3 bits (85), Expect = 0.007
Identities = 16/57 (28%), Positives = 32/57 (56%)
Frame = +1
Query: 514 SNLYISNLPPDMTLERLNTLFSPFGNITNSRVSQGIGFVCYETRQQAEDAIKHMNGQ 684
+ +YI L ++ + + F +G I + + G GFV ++ ++ AEDA+ +NG+
Sbjct: 3 ARIYIGRLTSRVSEKDIEHFFRGYGQIRDVLLKNGFGFVEFDDKRDAEDAVHDLNGK 59
Score = 29.9 bits (64), Expect = 2.3
Identities = 15/51 (29%), Positives = 27/51 (52%)
Frame = +1
Query: 316 FSAMGKIESCKLIANRGYGFVEYEKHEDAEKARAAFNGLLMQGKTLKVSFA 468
F G+I ++ G+GFVE++ DAE A NG + G+ + + ++
Sbjct: 23 FRGYGQIRD--VLLKNGFGFVEFDDKRDAEDAVHDLNGKELGGERVILDYS 71
>Z66521-2|CAA91395.1| 312|Caenorhabditis elegans Hypothetical
protein W02B12.3a protein.
Length = 312
Score = 38.3 bits (85), Expect = 0.007
Identities = 16/57 (28%), Positives = 32/57 (56%)
Frame = +1
Query: 514 SNLYISNLPPDMTLERLNTLFSPFGNITNSRVSQGIGFVCYETRQQAEDAIKHMNGQ 684
+ +YI L ++ + + F +G I + + G GFV ++ ++ AEDA+ +NG+
Sbjct: 3 ARIYIGRLTSRVSEKDIEHFFRGYGQIRDVLLKNGFGFVEFDDKRDAEDAVHDLNGK 59
Score = 29.9 bits (64), Expect = 2.3
Identities = 15/51 (29%), Positives = 27/51 (52%)
Frame = +1
Query: 316 FSAMGKIESCKLIANRGYGFVEYEKHEDAEKARAAFNGLLMQGKTLKVSFA 468
F G+I ++ G+GFVE++ DAE A NG + G+ + + ++
Sbjct: 23 FRGYGQIRD--VLLKNGFGFVEFDDKRDAEDAVHDLNGKELGGERVILDYS 71
>Z81108-4|CAB03237.1| 85|Caenorhabditis elegans Hypothetical
protein R09B3.3 protein.
Length = 85
Score = 37.9 bits (84), Expect = 0.009
Identities = 22/80 (27%), Positives = 40/80 (50%), Gaps = 6/80 (7%)
Frame = +1
Query: 247 VSPTKLMVNYIPELMTRDMMYALFSAMGKIESCKLIANR------GYGFVEYEKHEDAEK 408
+S + V P T D + FS G + + +++ +R G+ FVE+ + A++
Sbjct: 1 MSGFSVYVGNAPFQTTEDDLGNYFSQAGNVSNVRIVCDRETGRPRGFAFVEFTEEAAAQR 60
Query: 409 ARAAFNGLLMQGKTLKVSFA 468
A FNG+ G+ L+V+ A
Sbjct: 61 AVDQFNGVDFNGRALRVNLA 80
Score = 31.1 bits (67), Expect = 1.0
Identities = 18/63 (28%), Positives = 29/63 (46%), Gaps = 8/63 (12%)
Frame = +1
Query: 517 NLYISNLPPDMTLERLNTLFSPFGNITNSRV--------SQGIGFVCYETRQQAEDAIKH 672
++Y+ N P T + L FS GN++N R+ +G FV + A+ A+
Sbjct: 5 SVYVGNAPFQTTEDDLGNYFSQAGNVSNVRIVCDRETGRPRGFAFVEFTEEAAAQRAVDQ 64
Query: 673 MNG 681
NG
Sbjct: 65 FNG 67
>Z81473-3|CAB03896.4| 514|Caenorhabditis elegans Hypothetical
protein C17D12.2 protein.
Length = 514
Score = 37.5 bits (83), Expect = 0.012
Identities = 22/63 (34%), Positives = 35/63 (55%), Gaps = 8/63 (12%)
Frame = +1
Query: 517 NLYISNLPPDMTLERLNTLFSPFGNITNSRV--------SQGIGFVCYETRQQAEDAIKH 672
NL+I +LP + L +F+PFG+I +++V S+ GFV Y+ ++ AI
Sbjct: 430 NLFIYHLPQEFGDAELIQMFAPFGHIVSAKVFVDRATNQSKCFGFVSYDNIHSSQAAITA 489
Query: 673 MNG 681
MNG
Sbjct: 490 MNG 492
Score = 34.3 bits (75), Expect = 0.11
Identities = 23/82 (28%), Positives = 38/82 (46%), Gaps = 6/82 (7%)
Frame = +1
Query: 262 LMVNYIPELMTRDMMYALFSAMGKIESCKLIANRG------YGFVEYEKHEDAEKARAAF 423
L + ++P+ + +F+ G I S K+ +R +GFV Y+ ++ A A
Sbjct: 431 LFIYHLPQEFGDAELIQMFAPFGHIVSAKVFVDRATNQSKCFGFVSYDNIHSSQAAITAM 490
Query: 424 NGLLMQGKTLKVSFALLNPENK 489
NG + K LKV L P N+
Sbjct: 491 NGFQIGMKRLKVQ--LKRPRNE 510
>AY342388-1|AAQ19851.1| 514|Caenorhabditis elegans putative
RNA-binding protein protein.
Length = 514
Score = 37.5 bits (83), Expect = 0.012
Identities = 22/63 (34%), Positives = 35/63 (55%), Gaps = 8/63 (12%)
Frame = +1
Query: 517 NLYISNLPPDMTLERLNTLFSPFGNITNSRV--------SQGIGFVCYETRQQAEDAIKH 672
NL+I +LP + L +F+PFG+I +++V S+ GFV Y+ ++ AI
Sbjct: 430 NLFIYHLPQEFGDAELIQMFAPFGHIVSAKVFVDRATNQSKCFGFVSYDNIHSSQAAITA 489
Query: 673 MNG 681
MNG
Sbjct: 490 MNG 492
Score = 34.3 bits (75), Expect = 0.11
Identities = 23/82 (28%), Positives = 38/82 (46%), Gaps = 6/82 (7%)
Frame = +1
Query: 262 LMVNYIPELMTRDMMYALFSAMGKIESCKLIANRG------YGFVEYEKHEDAEKARAAF 423
L + ++P+ + +F+ G I S K+ +R +GFV Y+ ++ A A
Sbjct: 431 LFIYHLPQEFGDAELIQMFAPFGHIVSAKVFVDRATNQSKCFGFVSYDNIHSSQAAITAM 490
Query: 424 NGLLMQGKTLKVSFALLNPENK 489
NG + K LKV L P N+
Sbjct: 491 NGFQIGMKRLKVQ--LKRPRNE 510
>Z66521-8|CAA91394.1| 281|Caenorhabditis elegans Hypothetical
protein W02B12.2 protein.
Length = 281
Score = 36.7 bits (81), Expect = 0.020
Identities = 15/55 (27%), Positives = 31/55 (56%)
Frame = +1
Query: 520 LYISNLPPDMTLERLNTLFSPFGNITNSRVSQGIGFVCYETRQQAEDAIKHMNGQ 684
+YI LP + + F +G +++ + G GFV ++ ++ A+DA+ +NG+
Sbjct: 4 VYIGRLPNRASDRDVEHFFRGYGKLSDVIMKNGFGFVDFQDQRDADDAVHDLNGK 58
Score = 31.1 bits (67), Expect = 1.0
Identities = 20/71 (28%), Positives = 35/71 (49%)
Frame = +1
Query: 295 RDMMYALFSAMGKIESCKLIANRGYGFVEYEKHEDAEKARAAFNGLLMQGKTLKVSFALL 474
RD+ + F GK+ +I G+GFV+++ DA+ A NG + G+ + + F
Sbjct: 16 RDVEH-FFRGYGKLSD--VIMKNGFGFVDFQDQRDADDAVHDLNGKELCGERVILEF--- 69
Query: 475 NPENKVSHKPD 507
P KV + +
Sbjct: 70 -PRRKVGYNEE 79
>Z97628-2|CAB10726.2| 427|Caenorhabditis elegans Hypothetical
protein F39H2.2a protein.
Length = 427
Score = 36.3 bits (80), Expect = 0.027
Identities = 23/100 (23%), Positives = 49/100 (49%), Gaps = 6/100 (6%)
Frame = +1
Query: 232 DANTNVSPTKLMVNYIPELMTRDMMYALFSAMGKIESCKLIANR------GYGFVEYEKH 393
DA+ L V + + T + + +FS GKI +C+++ +R Y F+E++
Sbjct: 233 DADEVPPENVLFVCKLNPVTTDEDLEIIFSRFGKINNCEIVRDRRSGDSLQYAFIEFDNA 292
Query: 394 EDAEKARAAFNGLLMQGKTLKVSFALLNPENKVSHKPDTE 513
+ E+A + +L+ + + V F+ +N +KP ++
Sbjct: 293 KSCEQAFFKMDNVLIDDRRIHVDFSQSVSQN-YKYKPKSQ 331
>Z81108-1|CAB03236.1| 83|Caenorhabditis elegans Hypothetical
protein R09B3.2 protein.
Length = 83
Score = 36.3 bits (80), Expect = 0.027
Identities = 19/73 (26%), Positives = 38/73 (52%), Gaps = 6/73 (8%)
Frame = +1
Query: 268 VNYIPELMTRDMMYALFSAMGKIESCKLIANR------GYGFVEYEKHEDAEKARAAFNG 429
V P T + + FS++G+I + +++ +R G+ F+E+ + A++A NG
Sbjct: 9 VGNAPFQTTEEELGNFFSSIGQINNVRIVCDRETGRPRGFAFIEFAEEGSAQRAVEQMNG 68
Query: 430 LLMQGKTLKVSFA 468
G+ L+V+ A
Sbjct: 69 AEFNGRPLRVNLA 81
>Z81080-5|CAB03088.2| 427|Caenorhabditis elegans Hypothetical
protein F39H2.2a protein.
Length = 427
Score = 36.3 bits (80), Expect = 0.027
Identities = 23/100 (23%), Positives = 49/100 (49%), Gaps = 6/100 (6%)
Frame = +1
Query: 232 DANTNVSPTKLMVNYIPELMTRDMMYALFSAMGKIESCKLIANR------GYGFVEYEKH 393
DA+ L V + + T + + +FS GKI +C+++ +R Y F+E++
Sbjct: 233 DADEVPPENVLFVCKLNPVTTDEDLEIIFSRFGKINNCEIVRDRRSGDSLQYAFIEFDNA 292
Query: 394 EDAEKARAAFNGLLMQGKTLKVSFALLNPENKVSHKPDTE 513
+ E+A + +L+ + + V F+ +N +KP ++
Sbjct: 293 KSCEQAFFKMDNVLIDDRRIHVDFSQSVSQN-YKYKPKSQ 331
>Z81080-2|CAD56584.1| 358|Caenorhabditis elegans Hypothetical
protein F39H2.2b protein.
Length = 358
Score = 36.3 bits (80), Expect = 0.027
Identities = 23/100 (23%), Positives = 49/100 (49%), Gaps = 6/100 (6%)
Frame = +1
Query: 232 DANTNVSPTKLMVNYIPELMTRDMMYALFSAMGKIESCKLIANR------GYGFVEYEKH 393
DA+ L V + + T + + +FS GKI +C+++ +R Y F+E++
Sbjct: 164 DADEVPPENVLFVCKLNPVTTDEDLEIIFSRFGKINNCEIVRDRRSGDSLQYAFIEFDNA 223
Query: 394 EDAEKARAAFNGLLMQGKTLKVSFALLNPENKVSHKPDTE 513
+ E+A + +L+ + + V F+ +N +KP ++
Sbjct: 224 KSCEQAFFKMDNVLIDDRRIHVDFSQSVSQN-YKYKPKSQ 262
>AC024826-10|AAM97977.1| 435|Caenorhabditis elegans Hypothetical
protein Y55F3AM.3c protein.
Length = 435
Score = 36.3 bits (80), Expect = 0.027
Identities = 19/78 (24%), Positives = 38/78 (48%), Gaps = 5/78 (6%)
Frame = +1
Query: 244 NVSPTKLMVNYIPELMTRDMMYALFSAMGKIESCKLIA-----NRGYGFVEYEKHEDAEK 408
N PT ++V + + M+ +F + G+IE L NRG+ + + +DA+K
Sbjct: 123 NKGPTHVLVENLHPKIDEKMIRDIFESFGRIEKIDLEVDSNRENRGFATITFRNADDAQK 182
Query: 409 ARAAFNGLLMQGKTLKVS 462
+ N + G+ +++S
Sbjct: 183 SCEQLNNFELAGRCIRLS 200
>AC024826-8|AAF60795.2| 580|Caenorhabditis elegans Hypothetical
protein Y55F3AM.3a protein.
Length = 580
Score = 36.3 bits (80), Expect = 0.027
Identities = 19/78 (24%), Positives = 38/78 (48%), Gaps = 5/78 (6%)
Frame = +1
Query: 244 NVSPTKLMVNYIPELMTRDMMYALFSAMGKIESCKLIA-----NRGYGFVEYEKHEDAEK 408
N PT ++V + + M+ +F + G+IE L NRG+ + + +DA+K
Sbjct: 268 NKGPTHVLVENLHPKIDEKMIRDIFESFGRIEKIDLEVDSNRENRGFATITFRNADDAQK 327
Query: 409 ARAAFNGLLMQGKTLKVS 462
+ N + G+ +++S
Sbjct: 328 SCEQLNNFELAGRCIRLS 345
>U00052-10|AAK21429.2| 289|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 5 protein.
Length = 289
Score = 35.9 bits (79), Expect = 0.036
Identities = 24/87 (27%), Positives = 43/87 (49%), Gaps = 8/87 (9%)
Frame = +1
Query: 235 ANTNVSPTK-LMVNYIPELMTRDMMYALFSAMGKIESCKLI-------ANRGYGFVEYEK 390
A + SP K +++ + + + + +FS G I++ L +RGYG+VEY+
Sbjct: 125 AARSASPAKRVVIKNLSRNVLKTHLEEIFSIYGAIKNVDLPPDRFHNHVHRGYGYVEYDN 184
Query: 391 HEDAEKARAAFNGLLMQGKTLKVSFAL 471
EDAEK+ +G + G + V +
Sbjct: 185 LEDAEKSIKHMDGGQIDGMAVHVEMTI 211
Score = 34.7 bits (76), Expect = 0.082
Identities = 21/61 (34%), Positives = 32/61 (52%), Gaps = 9/61 (14%)
Frame = +1
Query: 526 ISNLPPDMTLERLNTLFSPFGNITN---------SRVSQGIGFVCYETRQQAEDAIKHMN 678
I NL ++ L +FS +G I N + V +G G+V Y+ + AE +IKHM+
Sbjct: 137 IKNLSRNVLKTHLEEIFSIYGAIKNVDLPPDRFHNHVHRGYGYVEYDNLEDAEKSIKHMD 196
Query: 679 G 681
G
Sbjct: 197 G 197
>Z32683-11|CAA83626.1| 142|Caenorhabditis elegans Hypothetical
protein R07E5.14 protein.
Length = 142
Score = 35.1 bits (77), Expect = 0.062
Identities = 24/77 (31%), Positives = 38/77 (49%), Gaps = 6/77 (7%)
Frame = +1
Query: 262 LMVNYIPELMTRDMMYALFSAMGKIESCKLIANR------GYGFVEYEKHEDAEKARAAF 423
+ V I E T D ++ FS GKI++ L +R GY VEYE ++A +A
Sbjct: 57 VFVTNIHEEATEDDVHDKFSEYGKIKNIHLNLDRRTGFLKGYALVEYETQKEANEAIDQS 116
Query: 424 NGLLMQGKTLKVSFALL 474
N + G+ +KV + +
Sbjct: 117 NDTDLLGQNVKVDWCFV 133
>Z81038-2|CAB02757.1| 454|Caenorhabditis elegans Hypothetical
protein C25A1.4 protein.
Length = 454
Score = 34.7 bits (76), Expect = 0.082
Identities = 22/86 (25%), Positives = 43/86 (50%), Gaps = 3/86 (3%)
Frame = +1
Query: 220 NGGGD---ANTNVSPTKLMVNYIPELMTRDMMYALFSAMGKIESCKLIANRGYGFVEYEK 390
NG G A T + +++ +P T ++ G+++S ++A G + +
Sbjct: 370 NGAGGLAGAATPQATRVIIIRNLPSDYTWQIVRDRVRNFGEVDSVDMMAP-GAARIRFAT 428
Query: 391 HEDAEKARAAFNGLLMQGKTLKVSFA 468
+DAE+ARAA G ++G+ + V +A
Sbjct: 429 FQDAERARAALYGSTVEGRMISVDYA 454
>Z92826-4|CAB07322.1| 309|Caenorhabditis elegans Hypothetical
protein C18D11.4 protein.
Length = 309
Score = 34.3 bits (75), Expect = 0.11
Identities = 23/83 (27%), Positives = 38/83 (45%), Gaps = 7/83 (8%)
Frame = +1
Query: 244 NVSPTKLM-VNYIPELMTRDMMYALFSAMGKIESCKLIANR------GYGFVEYEKHEDA 402
N P+K + V + T + +F G+I C L+ +R G+GF+ + EDA
Sbjct: 71 NPQPSKCLGVFNLSSYTTEKDLRDVFGEFGEINKCDLVYDRPSGNSRGFGFIYFNLIEDA 130
Query: 403 EKARAAFNGLLMQGKTLKVSFAL 471
AR + G ++V F+L
Sbjct: 131 TAARDKLCNTDLDGHKIRVDFSL 153
>Z50044-2|CAA90354.1| 256|Caenorhabditis elegans Hypothetical
protein F22B5.2 protein.
Length = 256
Score = 34.3 bits (75), Expect = 0.11
Identities = 20/72 (27%), Positives = 35/72 (48%), Gaps = 6/72 (8%)
Frame = +1
Query: 268 VNYIPELMTRDMMYALFSAMGKIESCKLIANR------GYGFVEYEKHEDAEKARAAFNG 429
V +P+ M D + LF +G++ + ++ G+ FV +E +DA +A A N
Sbjct: 180 VTNLPQEMNEDELRDLFGKIGRVIRIFIARDKVTGLPKGFAFVTFESRDDAARAIAELND 239
Query: 430 LLMQGKTLKVSF 465
+ M LKV +
Sbjct: 240 IRMYHMVLKVEW 251
>Z83119-2|CAB05579.2| 608|Caenorhabditis elegans Hypothetical
protein R05H10.2 protein.
Length = 608
Score = 33.9 bits (74), Expect = 0.14
Identities = 21/78 (26%), Positives = 40/78 (51%), Gaps = 7/78 (8%)
Frame = +1
Query: 259 KLMVNYIPELMTRDMMYALFSAMGKIESCKLIANR-------GYGFVEYEKHEDAEKARA 417
+L++ +P ++ + L S +GK L +R G+GF+++ + DAEK R
Sbjct: 96 RLIIRNLPFKTKKEDLQNLCSNIGKFVEIVLPPSRKDPKTCAGFGFIQFVEKADAEKGRE 155
Query: 418 AFNGLLMQGKTLKVSFAL 471
FN + G+++ +AL
Sbjct: 156 FFNTNKVLGRSVAADWAL 173
>U23484-3|AAK68298.1| 126|Caenorhabditis elegans Sr protein
(splicing factor) protein4, isoform b protein.
Length = 126
Score = 33.5 bits (73), Expect = 0.19
Identities = 14/37 (37%), Positives = 24/37 (64%)
Frame = +1
Query: 358 NRGYGFVEYEKHEDAEKARAAFNGLLMQGKTLKVSFA 468
++G+GFV + + DAE A +G L+ G+ L+V+ A
Sbjct: 59 SKGFGFVRFYERRDAEHALDRTDGKLVDGRELRVTLA 95
>U23484-2|AAC46767.1| 196|Caenorhabditis elegans Sr protein
(splicing factor) protein4, isoform a protein.
Length = 196
Score = 33.5 bits (73), Expect = 0.19
Identities = 14/37 (37%), Positives = 24/37 (64%)
Frame = +1
Query: 358 NRGYGFVEYEKHEDAEKARAAFNGLLMQGKTLKVSFA 468
++G+GFV + + DAE A +G L+ G+ L+V+ A
Sbjct: 59 SKGFGFVRFYERRDAEHALDRTDGKLVDGRELRVTLA 95
>U21320-5|AAA62536.2| 332|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 7 protein.
Length = 332
Score = 31.9 bits (69), Expect = 0.58
Identities = 17/55 (30%), Positives = 27/55 (49%), Gaps = 5/55 (9%)
Frame = +1
Query: 316 FSAMGKIESCKLIAN-----RGYGFVEYEKHEDAEKARAAFNGLLMQGKTLKVSF 465
F A GKI+ ++ + RGY F+EY + A +G+ + GK L V +
Sbjct: 124 FEAYGKIKKLTMVHDEAGKPRGYAFIEYSDKAEMHTAYKKADGIKVDGKRLVVDY 178
>AF047662-1|AAC04442.1| 248|Caenorhabditis elegans Suppressor
protein 12 protein.
Length = 248
Score = 31.9 bits (69), Expect = 0.58
Identities = 23/86 (26%), Positives = 39/86 (45%), Gaps = 6/86 (6%)
Frame = +1
Query: 256 TKLMVNYIPELMTRDMMYALFSAMGKIESCKLIANR------GYGFVEYEKHEDAEKARA 417
TK+ V +P + ++ F G IE +I +R GYGFV + AE+A
Sbjct: 35 TKIFVGGLPYHTSDKTLHEYFEQFGDIEEAVVITDRNTQKSRGYGFVTMKDRASAERACK 94
Query: 418 AFNGLLMQGKTLKVSFALLNPENKVS 495
N ++ G+ V+ A L + + +
Sbjct: 95 DPNPII-DGRKANVNLAYLGAKPRTN 119
>Z99279-4|CAB16494.1| 121|Caenorhabditis elegans Hypothetical
protein Y57G11A.5 protein.
Length = 121
Score = 31.5 bits (68), Expect = 0.77
Identities = 22/83 (26%), Positives = 40/83 (48%), Gaps = 14/83 (16%)
Frame = +1
Query: 478 PENKVSHKPDTESNLYISNLPPDMTLERLNT-----------LFSPFGNITNSRVSQ--- 615
P+N+ + +Y+ N+P D T + LN +FS G I + +++
Sbjct: 5 PQNRKRKRNVENRQVYVGNMPFDATEKELNNDALTIYDAIEAVFSVMGPIKSIWMAKRPP 64
Query: 616 GIGFVCYETRQQAEDAIKHMNGQ 684
G FV ++ A DA+K++NG+
Sbjct: 65 GFAFVTFKRTVHAFDAVKYLNGK 87
>Z78019-5|CAB01455.1| 305|Caenorhabditis elegans Hypothetical
protein ZK863.7 protein.
Length = 305
Score = 31.5 bits (68), Expect = 0.77
Identities = 13/42 (30%), Positives = 22/42 (52%)
Frame = +1
Query: 514 SNLYISNLPPDMTLERLNTLFSPFGNITNSRVSQGIGFVCYE 639
S L++ NLP ++ +L +F PF +T + + FV E
Sbjct: 3 SKLFVGNLPDNVDSNKLKQVFQPFCKVTECDIVKNYAFVHIE 44
>U21302-2|AAA92287.1| 305|Caenorhabditis elegans RNP-1 protein.
Length = 305
Score = 31.5 bits (68), Expect = 0.77
Identities = 13/42 (30%), Positives = 22/42 (52%)
Frame = +1
Query: 514 SNLYISNLPPDMTLERLNTLFSPFGNITNSRVSQGIGFVCYE 639
S L++ NLP ++ +L +F PF +T + + FV E
Sbjct: 3 SKLFVGNLPDNVDSNKLKQVFQPFCKVTECDIVKNYAFVHIE 44
>AF067616-7|AAM98029.1| 423|Caenorhabditis elegans Hypothetical
protein F29C4.7b protein.
Length = 423
Score = 31.5 bits (68), Expect = 0.77
Identities = 34/160 (21%), Positives = 66/160 (41%), Gaps = 8/160 (5%)
Frame = +1
Query: 262 LMVNYIPELMTRDMMYALFSAMGKIESCKLIA----NRGYGFVEYEKHEDAEKARAAFNG 429
L V +P + + +F GK+E + + Y FV ++ + A +A+A
Sbjct: 171 LFVGNMPSDVKEREIRHVFEEHGKVEEVDIKTPINTDAAYAFVMFQTVDQAIQAKAEEQD 230
Query: 430 LLMQ--GKTLKVSFALLNPENKVSHKPDTESNLYISNLPPDMTLERLNTLFSPFGNITNS 603
++ G +K+ + +++VS + L++ L E L F FG + N
Sbjct: 231 RPIRAGGSRMKIGYG----KSQVSRR------LFVGGLGSWCDKEILQKAFGEFGFVENI 280
Query: 604 RVSQG--IGFVCYETRQQAEDAIKHMNGQCPIPGAGAVIV 717
G +V YE +++A + + G C G ++V
Sbjct: 281 DYDHGQPYAYVVYENTHTSQEACRSLRGACISKGNHPIMV 320
>AF067616-6|AAC19192.1| 520|Caenorhabditis elegans Hypothetical
protein F29C4.7a protein.
Length = 520
Score = 31.5 bits (68), Expect = 0.77
Identities = 34/160 (21%), Positives = 66/160 (41%), Gaps = 8/160 (5%)
Frame = +1
Query: 262 LMVNYIPELMTRDMMYALFSAMGKIESCKLIA----NRGYGFVEYEKHEDAEKARAAFNG 429
L V +P + + +F GK+E + + Y FV ++ + A +A+A
Sbjct: 171 LFVGNMPSDVKEREIRHVFEEHGKVEEVDIKTPINTDAAYAFVMFQTVDQAIQAKAEEQD 230
Query: 430 LLMQ--GKTLKVSFALLNPENKVSHKPDTESNLYISNLPPDMTLERLNTLFSPFGNITNS 603
++ G +K+ + +++VS + L++ L E L F FG + N
Sbjct: 231 RPIRAGGSRMKIGYG----KSQVSRR------LFVGGLGSWCDKEILQKAFGEFGFVENI 280
Query: 604 RVSQG--IGFVCYETRQQAEDAIKHMNGQCPIPGAGAVIV 717
G +V YE +++A + + G C G ++V
Sbjct: 281 DYDHGQPYAYVVYENTHTSQEACRSLRGACISKGNHPIMV 320
>AF067616-5|AAU05574.1| 497|Caenorhabditis elegans Hypothetical
protein F29C4.7c protein.
Length = 497
Score = 31.5 bits (68), Expect = 0.77
Identities = 34/160 (21%), Positives = 66/160 (41%), Gaps = 8/160 (5%)
Frame = +1
Query: 262 LMVNYIPELMTRDMMYALFSAMGKIESCKLIA----NRGYGFVEYEKHEDAEKARAAFNG 429
L V +P + + +F GK+E + + Y FV ++ + A +A+A
Sbjct: 148 LFVGNMPSDVKEREIRHVFEEHGKVEEVDIKTPINTDAAYAFVMFQTVDQAIQAKAEEQD 207
Query: 430 LLMQ--GKTLKVSFALLNPENKVSHKPDTESNLYISNLPPDMTLERLNTLFSPFGNITNS 603
++ G +K+ + +++VS + L++ L E L F FG + N
Sbjct: 208 RPIRAGGSRMKIGYG----KSQVSRR------LFVGGLGSWCDKEILQKAFGEFGFVENI 257
Query: 604 RVSQG--IGFVCYETRQQAEDAIKHMNGQCPIPGAGAVIV 717
G +V YE +++A + + G C G ++V
Sbjct: 258 DYDHGQPYAYVVYENTHTSQEACRSLRGACISKGNHPIMV 297
>AC084197-11|AAM44397.1| 305|Caenorhabditis elegans Homologous to
drosophila sqd (squid)protein protein 1, isoform a
protein.
Length = 305
Score = 31.1 bits (67), Expect = 1.0
Identities = 27/110 (24%), Positives = 52/110 (47%), Gaps = 8/110 (7%)
Frame = +1
Query: 358 NRGYGFVEYEKHEDAEKARAAFNGLLMQGKTLKVSFALLNPENKVSHKPDTESNLYISNL 537
+RG+ FVE+ E + A AA + +GK+++V A + ENK +++ L
Sbjct: 69 SRGFAFVEFTTGEGCKLALAAREQTI-KGKSVEVKPAK-SRENK---------KVFVGGL 117
Query: 538 PPDMTLERLNTLFSPFGNITN--------SRVSQGIGFVCYETRQQAEDA 663
P D + + L + F FG + + ++ + F+ +E + A+ A
Sbjct: 118 PSDYSEQDLRSHFEQFGKVDDIEWPFDKQTKARRNFAFIVFEEEESADKA 167
>AC084197-10|AAY43984.1| 308|Caenorhabditis elegans Homologous to
drosophila sqd (squid)protein protein 1, isoform b
protein.
Length = 308
Score = 31.1 bits (67), Expect = 1.0
Identities = 27/110 (24%), Positives = 52/110 (47%), Gaps = 8/110 (7%)
Frame = +1
Query: 358 NRGYGFVEYEKHEDAEKARAAFNGLLMQGKTLKVSFALLNPENKVSHKPDTESNLYISNL 537
+RG+ FVE+ E + A AA + +GK+++V A + ENK +++ L
Sbjct: 69 SRGFAFVEFTTGEGCKLALAAREQTI-KGKSVEVKPAK-SRENK---------KVFVGGL 117
Query: 538 PPDMTLERLNTLFSPFGNITN--------SRVSQGIGFVCYETRQQAEDA 663
P D + + L + F FG + + ++ + F+ +E + A+ A
Sbjct: 118 PSDYSEQDLRSHFEQFGKVDDIEWPFDKQTKARRNFAFIVFEEEESADKA 167
>Z73898-8|CAJ90496.1| 431|Caenorhabditis elegans Hypothetical
protein ZK822.5b protein.
Length = 431
Score = 30.3 bits (65), Expect = 1.8
Identities = 16/39 (41%), Positives = 26/39 (66%), Gaps = 4/39 (10%)
Frame = -2
Query: 581 GLKRVLSLS----RVMSGGKLLMYRLDSVSGLWLTLFSG 477
GL+RVLS++ R+ G++ +R+D + LW+ LFSG
Sbjct: 73 GLERVLSIAWDSGRISELGRM-DWRIDQYNSLWINLFSG 110
>Z73898-7|CAA98070.1| 577|Caenorhabditis elegans Hypothetical
protein ZK822.5a protein.
Length = 577
Score = 30.3 bits (65), Expect = 1.8
Identities = 16/39 (41%), Positives = 26/39 (66%), Gaps = 4/39 (10%)
Frame = -2
Query: 581 GLKRVLSLS----RVMSGGKLLMYRLDSVSGLWLTLFSG 477
GL+RVLS++ R+ G++ +R+D + LW+ LFSG
Sbjct: 219 GLERVLSIAWDSGRISELGRM-DWRIDQYNSLWINLFSG 256
>Z35601-1|CAA84667.2| 320|Caenorhabditis elegans Hypothetical
protein R10E9.1 protein.
Length = 320
Score = 29.9 bits (64), Expect = 2.3
Identities = 27/109 (24%), Positives = 46/109 (42%), Gaps = 10/109 (9%)
Frame = +1
Query: 259 KLMVNYIPELMTRDMMYALFSAMGKIESCKLI------ANRGYGFVEYEKHEDAEKARA- 417
K+ + + T + M F GK+E L+ +RG+GFV ++ E A+K
Sbjct: 135 KVFIGGLSATSTLEDMKQYFETYGKVEDAMLMFDKATQRHRGFGFVTFDSDEVADKVCEI 194
Query: 418 ---AFNGLLMQGKTLKVSFALLNPENKVSHKPDTESNLYISNLPPDMTL 555
NG +++ K + +L P + NLY +PP+ L
Sbjct: 195 HFHEINGKMVECKKAQPKEVML-PVQLNKSRAAAARNLY--GMPPETLL 240
>U55857-7|AAA98033.1| 217|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 3 protein.
Length = 217
Score = 29.9 bits (64), Expect = 2.3
Identities = 23/92 (25%), Positives = 40/92 (43%), Gaps = 2/92 (2%)
Frame = +1
Query: 199 TMQNDMENGGGDANTNVSPTKLMVNYIPELMTRDMMYALFSAMGKIESCKLIAN-RGYGF 375
T + E G N+ L + IPE + + +FS + + + N + + F
Sbjct: 128 TQKEPQETDGPGLPNNI----LFCSNIPEGTEPEQIQTIFSQFPGLREVRWMPNTKDFAF 183
Query: 376 VEYEKHEDAEKARAAF-NGLLMQGKTLKVSFA 468
+EYE + +E AR A N + + + V FA
Sbjct: 184 IEYESEDLSEPARQALDNFRITPTQQITVKFA 215
>AB036738-1|BAB13470.1| 320|Caenorhabditis elegans neural
RNA-binding protein MSI-1 protein.
Length = 320
Score = 29.9 bits (64), Expect = 2.3
Identities = 27/109 (24%), Positives = 46/109 (42%), Gaps = 10/109 (9%)
Frame = +1
Query: 259 KLMVNYIPELMTRDMMYALFSAMGKIESCKLI------ANRGYGFVEYEKHEDAEKARA- 417
K+ + + T + M F GK+E L+ +RG+GFV ++ E A+K
Sbjct: 135 KVFIGGLSATSTLEDMKQYFETYGKVEDAMLMFDKATQRHRGFGFVTFDSDEVADKVCEI 194
Query: 418 ---AFNGLLMQGKTLKVSFALLNPENKVSHKPDTESNLYISNLPPDMTL 555
NG +++ K + +L P + NLY +PP+ L
Sbjct: 195 HFHEINGKMVECKKAQPKEVML-PVQLNKSRAAAARNLY--GMPPETLL 240
>Z81084-7|CAB03111.1| 312|Caenorhabditis elegans Hypothetical
protein F46A9.6 protein.
Length = 312
Score = 29.5 bits (63), Expect = 3.1
Identities = 23/83 (27%), Positives = 36/83 (43%), Gaps = 9/83 (10%)
Frame = +1
Query: 460 SFALLNPENKVSHKPDTESNLYISNLPPDMTLERLNTLF-------SPFGNIT--NSRVS 612
S LN + + P L++S LP D L LF +T N + +
Sbjct: 13 SMESLNSVSSEATNPSQVRTLFVSGLPMDAKPRELYLLFRGCRGYEGALLKMTSKNGKPT 72
Query: 613 QGIGFVCYETRQQAEDAIKHMNG 681
+GFV + ++Q A+DA K + G
Sbjct: 73 SPVGFVTFLSQQDAQDARKMLQG 95
>Z81037-10|CAB02754.1| 312|Caenorhabditis elegans Hypothetical
protein F46A9.6 protein.
Length = 312
Score = 29.5 bits (63), Expect = 3.1
Identities = 23/83 (27%), Positives = 36/83 (43%), Gaps = 9/83 (10%)
Frame = +1
Query: 460 SFALLNPENKVSHKPDTESNLYISNLPPDMTLERLNTLF-------SPFGNIT--NSRVS 612
S LN + + P L++S LP D L LF +T N + +
Sbjct: 13 SMESLNSVSSEATNPSQVRTLFVSGLPMDAKPRELYLLFRGCRGYEGALLKMTSKNGKPT 72
Query: 613 QGIGFVCYETRQQAEDAIKHMNG 681
+GFV + ++Q A+DA K + G
Sbjct: 73 SPVGFVTFLSQQDAQDARKMLQG 95
>X95609-1|CAA64867.1| 312|Caenorhabditis elegans mec-8 protein.
Length = 312
Score = 29.5 bits (63), Expect = 3.1
Identities = 23/83 (27%), Positives = 36/83 (43%), Gaps = 9/83 (10%)
Frame = +1
Query: 460 SFALLNPENKVSHKPDTESNLYISNLPPDMTLERLNTLF-------SPFGNIT--NSRVS 612
S LN + + P L++S LP D L LF +T N + +
Sbjct: 13 SMESLNSVSSEATNPSQVRTLFVSGLPMDAKPRELYLLFRGCRGYEGALLKMTSKNGKPT 72
Query: 613 QGIGFVCYETRQQAEDAIKHMNG 681
+GFV + ++Q A+DA K + G
Sbjct: 73 SPVGFVTFLSQQDAQDARKMLQG 95
>X95608-1|CAA64866.1| 312|Caenorhabditis elegans mec-8 protein.
Length = 312
Score = 29.5 bits (63), Expect = 3.1
Identities = 23/83 (27%), Positives = 36/83 (43%), Gaps = 9/83 (10%)
Frame = +1
Query: 460 SFALLNPENKVSHKPDTESNLYISNLPPDMTLERLNTLF-------SPFGNIT--NSRVS 612
S LN + + P L++S LP D L LF +T N + +
Sbjct: 13 SMESLNSVSSEATNPSQVRTLFVSGLPMDAKPRELYLLFRGCRGYEGALLKMTSKNGKPT 72
Query: 613 QGIGFVCYETRQQAEDAIKHMNG 681
+GFV + ++Q A+DA K + G
Sbjct: 73 SPVGFVTFLSQQDAQDARKMLQG 95
>U28944-8|AAK68193.1| 103|Caenorhabditis elegans Hypothetical
protein C18A3.5c protein.
Length = 103
Score = 29.5 bits (63), Expect = 3.1
Identities = 12/35 (34%), Positives = 21/35 (60%)
Frame = +1
Query: 505 DTESNLYISNLPPDMTLERLNTLFSPFGNITNSRV 609
D LY+ NL +T + + TLF+ G++T ++V
Sbjct: 43 DEPRTLYVGNLDSTVTEDFIATLFNQIGSVTKTKV 77
>U28738-11|AAK68399.3| 166|Caenorhabditis elegans Sr protein
(splicing factor) protein5, isoform b protein.
Length = 166
Score = 29.5 bits (63), Expect = 3.1
Identities = 14/44 (31%), Positives = 25/44 (56%)
Frame = +1
Query: 328 GKIESCKLIANRGYGFVEYEKHEDAEKARAAFNGLLMQGKTLKV 459
GKI + + G+ FV++E DAE A +G M+G ++++
Sbjct: 26 GKINNISM--KYGFAFVDFEDSRDAEDACHDLDGKTMEGSSMRL 67
>U28738-10|AAK72066.3| 208|Caenorhabditis elegans Sr protein
(splicing factor) protein5, isoform d protein.
Length = 208
Score = 29.5 bits (63), Expect = 3.1
Identities = 14/44 (31%), Positives = 25/44 (56%)
Frame = +1
Query: 328 GKIESCKLIANRGYGFVEYEKHEDAEKARAAFNGLLMQGKTLKV 459
GKI + + G+ FV++E DAE A +G M+G ++++
Sbjct: 26 GKINNISM--KYGFAFVDFEDSRDAEDACHDLDGKTMEGSSMRL 67
>U28738-9|AAA68314.3| 208|Caenorhabditis elegans Sr protein
(splicing factor) protein5, isoform a protein.
Length = 208
Score = 29.5 bits (63), Expect = 3.1
Identities = 14/44 (31%), Positives = 25/44 (56%)
Frame = +1
Query: 328 GKIESCKLIANRGYGFVEYEKHEDAEKARAAFNGLLMQGKTLKV 459
GKI + + G+ FV++E DAE A +G M+G ++++
Sbjct: 26 GKINNISM--KYGFAFVDFEDSRDAEDACHDLDGKTMEGSSMRL 67
>U23172-14|AAL02495.1| 165|Caenorhabditis elegans Hypothetical
protein F25B5.7b protein.
Length = 165
Score = 29.5 bits (63), Expect = 3.1
Identities = 15/36 (41%), Positives = 21/36 (58%)
Frame = +1
Query: 520 LYISNLPPDMTLERLNTLFSPFGNITNSRVSQGIGF 627
L++ NLP ++ L LFSP G+I +S G GF
Sbjct: 118 LFVGNLPNEVKETELKELFSPHGDIAECYLS-GKGF 152
>U80455-3|AAO38606.1| 145|Caenorhabditis elegans Elav-type rna
binding protein familyprotein 1, isoform c protein.
Length = 145
Score = 29.1 bits (62), Expect = 4.1
Identities = 13/32 (40%), Positives = 20/32 (62%)
Frame = +1
Query: 514 SNLYISNLPPDMTLERLNTLFSPFGNITNSRV 609
+NL+I +LP D L F+PFG I +++V
Sbjct: 76 ANLFIYHLPQDFGDSDLINTFAPFGGILSAKV 107
>U32305-18|AAK18852.2| 719|Caenorhabditis elegans Hypothetical
protein B0336.3 protein.
Length = 719
Score = 29.1 bits (62), Expect = 4.1
Identities = 12/31 (38%), Positives = 21/31 (67%), Gaps = 1/31 (3%)
Frame = +1
Query: 520 LYISNLPPDM-TLERLNTLFSPFGNITNSRV 609
L ++ +PP+M T+ +LN F+ FG + N +V
Sbjct: 368 LQVAKIPPEMNTIAKLNEHFATFGTVDNIQV 398
>AF047659-10|AAC04430.1| 798|Caenorhabditis elegans Hypothetical
protein K07H8.10 protein.
Length = 798
Score = 29.1 bits (62), Expect = 4.1
Identities = 22/89 (24%), Positives = 40/89 (44%), Gaps = 3/89 (3%)
Frame = +1
Query: 247 VSPTKLMVNYIPELMTRDMMYALFSAMGKIESCKLIA---NRGYGFVEYEKHEDAEKARA 417
++P +L +N +P + +F + I+ ++ F+ + EDA+ A A
Sbjct: 635 INPLQLFINALPGTCNNTDLKNIFRSSTDIKILHASGQPNSKKRAFITFGTVEDAQAAFA 694
Query: 418 AFNGLLMQGKTLKVSFALLNPENKVSHKP 504
NGL + + V +A + E KV KP
Sbjct: 695 KSNGLKVNNHLVDVFYA-RHQETKVDVKP 722
>AF003134-2|AAB54141.5| 691|Caenorhabditis elegans Hypothetical
protein ZC581.3 protein.
Length = 691
Score = 28.7 bits (61), Expect = 5.4
Identities = 27/125 (21%), Positives = 52/125 (41%), Gaps = 9/125 (7%)
Frame = +1
Query: 199 TMQNDMENGGGDANTNVSPTKLMVNYI----PELMTRDMMYALFSAMGKIESCK-----L 351
T+ NDME+ T+ PT+ N + E T + ++ +G +ES K
Sbjct: 237 TIVNDMEDDSSYTKTSTMPTEETTNSLESTSSESFTAESTSSISPILGTLESIKQEDFTT 296
Query: 352 IANRGYGFVEYEKHEDAEKARAAFNGLLMQGKTLKVSFALLNPENKVSHKPDTESNLYIS 531
+ + E + E ++ + NG Q L++ + +PE S + + + ++
Sbjct: 297 LLDDLITSAERDPTETVQRT-SEINGAFTQNSILELDH-VTSPETSTSESGNDDLDAIVN 354
Query: 532 NLPPD 546
NL D
Sbjct: 355 NLDED 359
>Z81107-9|CAB03234.2| 304|Caenorhabditis elegans Hypothetical
protein R07H5.10 protein.
Length = 304
Score = 28.3 bits (60), Expect = 7.1
Identities = 14/45 (31%), Positives = 23/45 (51%)
Frame = +1
Query: 481 ENKVSHKPDTESNLYISNLPPDMTLERLNTLFSPFGNITNSRVSQ 615
+N+ +K + NL SNL D +E+LN L N+R+ +
Sbjct: 202 KNEEKYKKEAFENLIRSNLVKDQKIEQLNNLVQSGKQRENARIME 246
>Z68335-4|CAA92732.2| 304|Caenorhabditis elegans Hypothetical
protein R07H5.10 protein.
Length = 304
Score = 28.3 bits (60), Expect = 7.1
Identities = 14/45 (31%), Positives = 23/45 (51%)
Frame = +1
Query: 481 ENKVSHKPDTESNLYISNLPPDMTLERLNTLFSPFGNITNSRVSQ 615
+N+ +K + NL SNL D +E+LN L N+R+ +
Sbjct: 202 KNEEKYKKEAFENLIRSNLVKDQKIEQLNNLVQSGKQRENARIME 246
>U39997-3|AAK68389.1| 498|Caenorhabditis elegans Human daz (deleted
in azoospermia)homolog protein 1 protein.
Length = 498
Score = 28.3 bits (60), Expect = 7.1
Identities = 14/59 (23%), Positives = 27/59 (45%), Gaps = 5/59 (8%)
Frame = +1
Query: 253 PTKLMVNYIPELMTRDMMYALFSAMGKIESCKLIAN-----RGYGFVEYEKHEDAEKAR 414
P ++ V P T + F ++ K++ + +GYGF+ +E + AE+ R
Sbjct: 65 PNRIFVGGFPTSTTETELREHFEKFFAVKDVKMVKSLDGQSKGYGFITFETEDQAEEIR 123
>AB025253-1|BAA88577.1| 499|Caenorhabditis elegans DAZ-1 protein.
Length = 499
Score = 28.3 bits (60), Expect = 7.1
Identities = 14/59 (23%), Positives = 27/59 (45%), Gaps = 5/59 (8%)
Frame = +1
Query: 253 PTKLMVNYIPELMTRDMMYALFSAMGKIESCKLIAN-----RGYGFVEYEKHEDAEKAR 414
P ++ V P T + F ++ K++ + +GYGF+ +E + AE+ R
Sbjct: 66 PNRIFVGGFPTSTTETELREHFEKFFAVKDVKMVKSLDGQSKGYGFITFETEDQAEEIR 124
>Z81017-13|CAB02674.2| 526|Caenorhabditis elegans Hypothetical
protein F59F3.4 protein.
Length = 526
Score = 27.9 bits (59), Expect = 9.4
Identities = 11/22 (50%), Positives = 15/22 (68%)
Frame = -1
Query: 360 IRYQLAALYFTHGREERVHHVA 295
IR + LYF HG EE VH+++
Sbjct: 173 IRLKKKGLYFKHGTEEDVHYLS 194
>Z68005-5|CAA91993.2| 526|Caenorhabditis elegans Hypothetical
protein F59F3.4 protein.
Length = 526
Score = 27.9 bits (59), Expect = 9.4
Identities = 11/22 (50%), Positives = 15/22 (68%)
Frame = -1
Query: 360 IRYQLAALYFTHGREERVHHVA 295
IR + LYF HG EE VH+++
Sbjct: 173 IRLKKKGLYFKHGTEEDVHYLS 194
>U28928-13|AAL16321.1| 339|Caenorhabditis elegans Hypothetical
protein C44B7.2b protein.
Length = 339
Score = 27.9 bits (59), Expect = 9.4
Identities = 21/61 (34%), Positives = 32/61 (52%), Gaps = 4/61 (6%)
Frame = +1
Query: 298 DMMYALFSAMGKIESCKLIANRGY--GFVEYEKHEDAEKARAAFNGL-LMQG-KTLKVSF 465
D++Y + +A GK+ ++ VE+E E A+ A+ A NG + G TLKV F
Sbjct: 137 DVIYQISNAQGKVLRVAVMHKPTVVQALVEFESMEVAKAAKHAMNGADIYSGCCTLKVEF 196
Query: 466 A 468
A
Sbjct: 197 A 197
>U28928-12|AAL16320.2| 597|Caenorhabditis elegans Hypothetical
protein C44B7.2a protein.
Length = 597
Score = 27.9 bits (59), Expect = 9.4
Identities = 21/61 (34%), Positives = 32/61 (52%), Gaps = 4/61 (6%)
Frame = +1
Query: 298 DMMYALFSAMGKIESCKLIANRGY--GFVEYEKHEDAEKARAAFNGL-LMQG-KTLKVSF 465
D++Y + +A GK+ ++ VE+E E A+ A+ A NG + G TLKV F
Sbjct: 137 DVIYQISNAQGKVLRVAVMHKPTVVQALVEFESMEVAKAAKHAMNGADIYSGCCTLKVEF 196
Query: 466 A 468
A
Sbjct: 197 A 197
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.315 0.130 0.376
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,250,975
Number of Sequences: 27780
Number of extensions: 379246
Number of successful extensions: 1325
Number of sequences better than 10.0: 115
Number of HSP's better than 10.0 without gapping: 1114
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1250
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 2061488408
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
- SilkBase 1999-2023 -