Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P16_F_M08
         (473 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY321476-1|AAQ23386.1|  253|Tribolium castaneum Ash protein.           23   1.4  
AM292349-1|CAL23161.1|  248|Tribolium castaneum gustatory recept...    23   1.4  
DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase rever...    22   3.3  
DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7 prot...    21   5.8  

>AY321476-1|AAQ23386.1|  253|Tribolium castaneum Ash protein.
          Length = 253

 Score = 23.0 bits (47), Expect = 1.4
 Identities = 11/38 (28%), Positives = 19/38 (50%)
 Frame = +1

Query: 25  KAHVFSRNEISRAPLSVLVRLCSILSFSCRRYIQFLXY 138
           K  + S+  ++ AP    V + +     C+R IQF+ Y
Sbjct: 41  KTVIQSKRPLAPAPERTSVLVTNNSDLRCKRKIQFMPY 78


>AM292349-1|CAL23161.1|  248|Tribolium castaneum gustatory receptor
           candidate 28 protein.
          Length = 248

 Score = 23.0 bits (47), Expect = 1.4
 Identities = 16/50 (32%), Positives = 22/50 (44%)
 Frame = +3

Query: 63  SSVCPCASVFNPIIFLSAXYPVPXVHHKLVQYNAIPFMKRVKNYFYSSAD 212
           +SV    ++ NP  F S+ Y V  V H L   NA    +  +N    S D
Sbjct: 170 TSVIMTLALGNPYCFNSSVYKVFPVEHLLFIANAFITSQSCENATLYSGD 219


>DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase reverse
           transcriptase protein.
          Length = 596

 Score = 21.8 bits (44), Expect = 3.3
 Identities = 8/18 (44%), Positives = 13/18 (72%)
 Frame = +3

Query: 135 VHHKLVQYNAIPFMKRVK 188
           V HK   Y+AIP+++ V+
Sbjct: 90  VLHKCYDYDAIPWLQNVE 107


>DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7
           protein.
          Length = 980

 Score = 21.0 bits (42), Expect = 5.8
 Identities = 8/10 (80%), Positives = 8/10 (80%)
 Frame = +1

Query: 124 QFLXYITSWS 153
           Q L YITSWS
Sbjct: 523 QVLCYITSWS 532


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 84,930
Number of Sequences: 336
Number of extensions: 1618
Number of successful extensions: 11
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used: 11036865
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)