Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P16_F_M08
         (473 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced prot...    24   0.95 
AY313893-1|AAQ82184.1|  437|Apis mellifera major royal jelly pro...    22   2.9  
DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase ...    21   8.9  
DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase ...    21   8.9  

>AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced protein
           75 protein.
          Length = 900

 Score = 23.8 bits (49), Expect = 0.95
 Identities = 11/26 (42%), Positives = 19/26 (73%), Gaps = 1/26 (3%)
 Frame = -1

Query: 284 ARSNVHG-RLTVERVQRLDTCNNFII 210
           ARS + G R+T E+++R D  +N+I+
Sbjct: 707 ARSLMEGPRMTAEQLKRTDIIHNYIM 732


>AY313893-1|AAQ82184.1|  437|Apis mellifera major royal jelly
           protein MRJP6 protein.
          Length = 437

 Score = 22.2 bits (45), Expect = 2.9
 Identities = 20/63 (31%), Positives = 25/63 (39%)
 Frame = +3

Query: 120 YPVPXVHHKLVQYNAIPFMKRVKNYFYSSADNKIITGIQALDSLNSKATVNITAGGVGYP 299
           Y  P   H L   N  PFMK    Y     +N    GIQ + +  S A V    G + + 
Sbjct: 267 YYSPLTSHSLYYVNMEPFMK--SQY---EENNIEYEGIQDIFNTQSSAKVMSKNGVLFFG 321

Query: 300 YVN 308
            VN
Sbjct: 322 LVN 324


>DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase
           isoform B protein.
          Length = 931

 Score = 20.6 bits (41), Expect = 8.9
 Identities = 9/24 (37%), Positives = 15/24 (62%)
 Frame = -3

Query: 396 QINLFLNSSG*RIFRCRNSGRIRV 325
           Q+NL +   G +IF   N+G ++V
Sbjct: 118 QLNLPILKDGVQIFIAPNNGAVKV 141


>DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase
           isoform A protein.
          Length = 969

 Score = 20.6 bits (41), Expect = 8.9
 Identities = 9/24 (37%), Positives = 15/24 (62%)
 Frame = -3

Query: 396 QINLFLNSSG*RIFRCRNSGRIRV 325
           Q+NL +   G +IF   N+G ++V
Sbjct: 156 QLNLPILKDGVQIFIAPNNGAVKV 179


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 105,598
Number of Sequences: 438
Number of extensions: 2206
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 12805416
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)