Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P16_F_M07
         (859 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory recept...    25   1.0  
AM292346-1|CAL23158.2|  314|Tribolium castaneum gustatory recept...    25   1.0  
AJ223614-1|CAA11490.1|  301|Tribolium castaneum orthodenticle-2 ...    24   1.3  
AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory recept...    21   9.4  

>AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory receptor
           candidate 59 protein.
          Length = 489

 Score = 24.6 bits (51), Expect = 1.0
 Identities = 14/41 (34%), Positives = 22/41 (53%)
 Frame = +3

Query: 291 IFLSTLTIRSQSVRLLNTLTHRQTTVNEVYHNKFARYRMTV 413
           IFL  L I + ++ +L T+T  + T+ E    K   YR+ V
Sbjct: 279 IFLPLLCILTNTLEILITVTVCELTILEYKRTKKLLYRIPV 319


>AM292346-1|CAL23158.2|  314|Tribolium castaneum gustatory receptor
           candidate 25 protein.
          Length = 314

 Score = 24.6 bits (51), Expect = 1.0
 Identities = 14/41 (34%), Positives = 22/41 (53%)
 Frame = +3

Query: 291 IFLSTLTIRSQSVRLLNTLTHRQTTVNEVYHNKFARYRMTV 413
           IFL  L I + ++ +L T+T  + T+ E    K   YR+ V
Sbjct: 104 IFLPLLCILTNTLEILITVTVCELTILEYKRTKKLLYRIPV 144


>AJ223614-1|CAA11490.1|  301|Tribolium castaneum orthodenticle-2
           protein protein.
          Length = 301

 Score = 24.2 bits (50), Expect = 1.3
 Identities = 11/33 (33%), Positives = 18/33 (54%), Gaps = 1/33 (3%)
 Frame = -3

Query: 497 NEVPYYKNINFMFYSRYKENKTG-GFATTHGHS 402
           N  PYY N++++  S    ++ G G  T+ G S
Sbjct: 254 NNYPYYSNMDYLSSSTMSHSQFGNGLETSWGKS 286


>AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory receptor
           candidate 48 protein.
          Length = 408

 Score = 21.4 bits (43), Expect = 9.4
 Identities = 9/39 (23%), Positives = 18/39 (46%)
 Frame = -2

Query: 354 YELVY*ANERSEIGWLMLIKKYVIFCTLLQS*VVHYVRY 238
           Y + Y   E     ++ L++   +FC  +    V+Y+ Y
Sbjct: 123 YTINYNFKESERNDYVSLLQLVFVFCYFIYLFTVYYIYY 161


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 191,180
Number of Sequences: 336
Number of extensions: 4174
Number of successful extensions: 8
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 23763101
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)