Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P16_F_M07
         (859 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY578804-1|AAT07309.1|  133|Anopheles gambiae maverick protein.        24   5.1  
AY135184-1|AAN17505.1| 1009|Anopheles gambiae laccase 1 protein.       24   5.1  
AY943929-1|AAX49502.1|  755|Anopheles gambiae laccase-2 isoform ...    24   6.8  
AY943928-1|AAX49501.1|  753|Anopheles gambiae laccase-2 isoform ...    24   6.8  
AY705405-1|AAU12514.1|  519|Anopheles gambiae nicotinic acetylch...    23   9.0  

>AY578804-1|AAT07309.1|  133|Anopheles gambiae maverick protein.
          Length = 133

 Score = 24.2 bits (50), Expect = 5.1
 Identities = 14/39 (35%), Positives = 18/39 (46%)
 Frame = +1

Query: 145 QYKYFGTKFLMGRCGGVA*PGKNVRNIRFLLVTHIVYDL 261
           Q K F   F  GRC     P  +   ++ LL  HI YD+
Sbjct: 53  QPKIFDAGFCRGRCPTKFNPATHHALLQSLLHEHIKYDV 91


>AY135184-1|AAN17505.1| 1009|Anopheles gambiae laccase 1 protein.
          Length = 1009

 Score = 24.2 bits (50), Expect = 5.1
 Identities = 11/26 (42%), Positives = 14/26 (53%)
 Frame = -3

Query: 446  KENKTGGFATTHGHSVTCELIVVHFI 369
            K  + G     HGHS+T  L+VV  I
Sbjct: 976  KLGQLGSGGARHGHSLTSSLLVVVLI 1001


>AY943929-1|AAX49502.1|  755|Anopheles gambiae laccase-2 isoform B
           protein.
          Length = 755

 Score = 23.8 bits (49), Expect = 6.8
 Identities = 12/48 (25%), Positives = 20/48 (41%)
 Frame = -3

Query: 539 VHKKDVWCRGTPDRNEVPYYKNINFMFYSRYKENKTGGFATTHGHSVT 396
           +H   +W RGT   + VP+         + ++   TG   T   H+ T
Sbjct: 242 IHWHGIWQRGTQYYDGVPFVTQCPIQQGNTFRYQWTGNAGTHFWHAHT 289


>AY943928-1|AAX49501.1|  753|Anopheles gambiae laccase-2 isoform A
           protein.
          Length = 753

 Score = 23.8 bits (49), Expect = 6.8
 Identities = 12/48 (25%), Positives = 20/48 (41%)
 Frame = -3

Query: 539 VHKKDVWCRGTPDRNEVPYYKNINFMFYSRYKENKTGGFATTHGHSVT 396
           +H   +W RGT   + VP+         + ++   TG   T   H+ T
Sbjct: 242 IHWHGIWQRGTQYYDGVPFVTQCPIQQGNTFRYQWTGNAGTHFWHAHT 289


>AY705405-1|AAU12514.1|  519|Anopheles gambiae nicotinic
           acetylcholine receptor subunitbeta 1 protein.
          Length = 519

 Score = 23.4 bits (48), Expect = 9.0
 Identities = 11/23 (47%), Positives = 12/23 (52%)
 Frame = -3

Query: 539 VHKKDVWCRGTPDRNEVPYYKNI 471
           V   D W  GT D  EVP Y N+
Sbjct: 190 VDLSDYWKSGTWDIIEVPAYLNV 212


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 828,463
Number of Sequences: 2352
Number of extensions: 16084
Number of successful extensions: 36
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 35
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 36
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 91372671
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)