Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P16_F_M05
         (776 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q0VJV2 Cluster: Like moricin; n=3; Manduca sexta|Rep: L...    41   0.030
UniRef50_Q6UV17 Cluster: Endonuclease and reverse transcriptase-...    40   0.052
UniRef50_Q8MTQ1 Cluster: Putative uncharacterized protein; n=1; ...    37   0.65 
UniRef50_A7TIK0 Cluster: Putative uncharacterized protein; n=1; ...    36   1.5  
UniRef50_UPI0000D56638 Cluster: PREDICTED: hypothetical protein;...    35   2.6  
UniRef50_UPI000049A412 Cluster: hypothetical protein 108.t00015;...    33   6.0  
UniRef50_Q4RK76 Cluster: Chromosome 2 SCAF15032, whole genome sh...    33   8.0  
UniRef50_A5F9Z5 Cluster: Uncharacterized protein; n=2; Flavobact...    33   8.0  
UniRef50_A7EQP1 Cluster: Putative uncharacterized protein; n=1; ...    33   8.0  

>UniRef50_Q0VJV2 Cluster: Like moricin; n=3; Manduca sexta|Rep: Like
           moricin - Manduca sexta (Tobacco hawkmoth) (Tobacco
           hornworm)
          Length = 248

 Score = 41.1 bits (92), Expect = 0.030
 Identities = 18/23 (78%), Positives = 18/23 (78%)
 Frame = +3

Query: 675 MGDDNHSPSGGPYARLPTRAIKK 743
           MGD NHSPSG PYA LPTRA  K
Sbjct: 1   MGDGNHSPSGRPYASLPTRAKMK 23


>UniRef50_Q6UV17 Cluster: Endonuclease and reverse transcriptase-like
            protein; n=25; Arthropoda|Rep: Endonuclease and reverse
            transcriptase-like protein - Bombyx mori (Silk moth)
          Length = 986

 Score = 40.3 bits (90), Expect = 0.052
 Identities = 17/18 (94%), Positives = 18/18 (100%)
 Frame = +2

Query: 632  GRQRLGSAPGMAEVHGRR 685
            GRQRLGSAPG+AEVHGRR
Sbjct: 969  GRQRLGSAPGIAEVHGRR 986


>UniRef50_Q8MTQ1 Cluster: Putative uncharacterized protein; n=1;
           Bombyx mori|Rep: Putative uncharacterized protein -
           Bombyx mori (Silk moth)
          Length = 85

 Score = 36.7 bits (81), Expect = 0.65
 Identities = 16/48 (33%), Positives = 27/48 (56%), Gaps = 1/48 (2%)
 Frame = -3

Query: 768 SITVVSSYIFLLPL*ADEHTAHLMVSGYRRPWTSAMPGAEPS-RCLPN 628
           ++  + ++IF +       T +L+   +R  WTS +PGA+P  RCL N
Sbjct: 18  TVAQLDTFIFQIKFSCFRQTIYLVDDNHRHSWTSTIPGAQPDHRCLVN 65


>UniRef50_A7TIK0 Cluster: Putative uncharacterized protein; n=1;
           Vanderwaltozyma polyspora DSM 70294|Rep: Putative
           uncharacterized protein - Vanderwaltozyma polyspora DSM
           70294
          Length = 995

 Score = 35.5 bits (78), Expect = 1.5
 Identities = 14/35 (40%), Positives = 22/35 (62%)
 Frame = +2

Query: 416 LLTMNLILMYLFIEICIYVNITHIGNKYNKFNTDD 520
           ++  N+I MY+F+ I   + ITH GN Y + N+ D
Sbjct: 768 IILWNIISMYIFMNIFASIIITHFGNVYGESNSSD 802


>UniRef50_UPI0000D56638 Cluster: PREDICTED: hypothetical protein;
           n=1; Tribolium castaneum|Rep: PREDICTED: hypothetical
           protein - Tribolium castaneum
          Length = 1809

 Score = 34.7 bits (76), Expect = 2.6
 Identities = 15/42 (35%), Positives = 25/42 (59%)
 Frame = -3

Query: 375 IIRQYNQKKHQKYFSSYTYSIRNLDDLTTVCANYFSLTSQKY 250
           I+   NQK+H+ YFS Y   + +++D +     + SLT QK+
Sbjct: 493 ILANLNQKQHKAYFSLYKVEVNDVEDTSDDWNAFKSLTPQKW 534


>UniRef50_UPI000049A412 Cluster: hypothetical protein 108.t00015;
           n=1; Entamoeba histolytica HM-1:IMSS|Rep: hypothetical
           protein 108.t00015 - Entamoeba histolytica HM-1:IMSS
          Length = 306

 Score = 33.5 bits (73), Expect = 6.0
 Identities = 17/40 (42%), Positives = 24/40 (60%), Gaps = 1/40 (2%)
 Frame = +1

Query: 130 LGDNF-LQWLFYFLSSFKLNILWALNPRHFFFVQYCVSSV 246
           LG NF +Q+ F+ L SF   ++ A N  HF  V YC+ S+
Sbjct: 244 LGHNFGIQYYFFCLLSFFFKVI-ATNSAHFLVVFYCIFSI 282


>UniRef50_Q4RK76 Cluster: Chromosome 2 SCAF15032, whole genome
           shotgun sequence; n=1; Tetraodon nigroviridis|Rep:
           Chromosome 2 SCAF15032, whole genome shotgun sequence -
           Tetraodon nigroviridis (Green puffer)
          Length = 1224

 Score = 33.1 bits (72), Expect = 8.0
 Identities = 17/60 (28%), Positives = 28/60 (46%)
 Frame = -1

Query: 263 HLRSTTTEDTQYCTKKKCRGFNAHKMFNLKEERK*NSHCKKLSPSNFRRACSVHPSREIK 84
           HLRS T E    C  + C    ++     K + +  +H  ++ P      CSVHP+ E++
Sbjct: 201 HLRSHTGEKPYLCEHEGCNKAFSNASDRAKHQNR--THSNEVGPQLAAMPCSVHPNSELE 258


>UniRef50_A5F9Z5 Cluster: Uncharacterized protein; n=2;
           Flavobacterium johnsoniae UW101|Rep: Uncharacterized
           protein - Flavobacterium johnsoniae UW101
          Length = 423

 Score = 33.1 bits (72), Expect = 8.0
 Identities = 22/89 (24%), Positives = 39/89 (43%), Gaps = 8/89 (8%)
 Frame = +1

Query: 88  ISREGWTEHALLKLLG--DNFLQWLFY------FLSSFKLNILWALNPRHFFFVQYCVSS 243
           I++  WT   +L   G    FL  L+Y      +   FK  ++W +NP   FF    +  
Sbjct: 298 INKSLWTSSYVLYTTGLATVFLTILYYTIDIADYKKGFKPFLIWGVNPMIVFFTSQIIPQ 357

Query: 244 VVVLLRCQ*EIISTDRRQIVQISYRICIA 330
            +V++  Q     +++  ++   Y  CIA
Sbjct: 358 ALVMIEFQNPHNPSEKINLLNYLYSFCIA 386


>UniRef50_A7EQP1 Cluster: Putative uncharacterized protein; n=1;
            Sclerotinia sclerotiorum 1980|Rep: Putative
            uncharacterized protein - Sclerotinia sclerotiorum 1980
          Length = 1570

 Score = 33.1 bits (72), Expect = 8.0
 Identities = 14/43 (32%), Positives = 25/43 (58%)
 Frame = -3

Query: 366  QYNQKKHQKYFSSYTYSIRNLDDLTTVCANYFSLTSQKYHNRR 238
            +Y  + ++++   Y  +IR  DDLTT    Y +++SQ Y + R
Sbjct: 1135 RYRGENNEEHRPRYERTIRTYDDLTTPIREYATVSSQSYKSNR 1177


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 759,551,962
Number of Sequences: 1657284
Number of extensions: 15324207
Number of successful extensions: 38141
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 36694
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 38101
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 65438977305
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)