Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P16_F_M05
         (776 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292354-1|CAL23166.1|  321|Tribolium castaneum gustatory recept...    25   0.68 
AM292375-1|CAL23187.2|  311|Tribolium castaneum gustatory recept...    25   0.89 
AY362544-1|AAQ63456.1|  268|Tribolium castaneum chitin synthase ...    23   2.1  
AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase ...    23   2.1  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    23   2.1  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    23   2.1  
X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.       22   6.3  

>AM292354-1|CAL23166.1|  321|Tribolium castaneum gustatory receptor
           candidate 33 protein.
          Length = 321

 Score = 25.0 bits (52), Expect = 0.68
 Identities = 14/40 (35%), Positives = 23/40 (57%), Gaps = 1/40 (2%)
 Frame = +1

Query: 85  FISREGWTEH-ALLKLLGDNFLQWLFYFLSSFKLNILWAL 201
           F  ++ W+E  A LKLL    ++   Y+L  F +N+L+ L
Sbjct: 74  FWKKKYWSEFLANLKLLKGRKIRKNLYYLLLFVINVLYVL 113


>AM292375-1|CAL23187.2|  311|Tribolium castaneum gustatory receptor
           candidate 54 protein.
          Length = 311

 Score = 24.6 bits (51), Expect = 0.89
 Identities = 8/23 (34%), Positives = 14/23 (60%)
 Frame = -1

Query: 644 AAAYRILKQNLTSLNRILEWLVV 576
           A  YR+L  N+ + N+I  W ++
Sbjct: 157 AVLYRLLADNVANFNKIFGWSLI 179


>AY362544-1|AAQ63456.1|  268|Tribolium castaneum chitin synthase
           protein.
          Length = 268

 Score = 23.4 bits (48), Expect = 2.1
 Identities = 8/23 (34%), Positives = 14/23 (60%)
 Frame = -3

Query: 387 CSYLIIRQYNQKKHQKYFSSYTY 319
           CS+ I+R++   KH  Y+   T+
Sbjct: 17  CSHRIVREHLGLKHDNYYELETH 39


>AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase
           protein.
          Length = 677

 Score = 23.4 bits (48), Expect = 2.1
 Identities = 8/23 (34%), Positives = 14/23 (60%)
 Frame = -3

Query: 387 CSYLIIRQYNQKKHQKYFSSYTY 319
           CS+ I+R++   KH  Y+   T+
Sbjct: 331 CSHRIVREHLGLKHDNYYELETH 353


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
           protein.
          Length = 1464

 Score = 23.4 bits (48), Expect = 2.1
 Identities = 8/23 (34%), Positives = 14/23 (60%)
 Frame = -3

Query: 387 CSYLIIRQYNQKKHQKYFSSYTY 319
           CS+ I+R++   KH  Y+   T+
Sbjct: 564 CSHRIVREHLGLKHDNYYELETH 586


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
           CHS2 protein.
          Length = 1464

 Score = 23.4 bits (48), Expect = 2.1
 Identities = 8/23 (34%), Positives = 14/23 (60%)
 Frame = -3

Query: 387 CSYLIIRQYNQKKHQKYFSSYTY 319
           CS+ I+R++   KH  Y+   T+
Sbjct: 564 CSHRIVREHLGLKHDNYYELETH 586


>X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.
          Length = 524

 Score = 21.8 bits (44), Expect = 6.3
 Identities = 9/24 (37%), Positives = 13/24 (54%)
 Frame = -3

Query: 714 HTAHLMVSGYRRPWTSAMPGAEPS 643
           +T H+   G+  P+T  M G E S
Sbjct: 486 YTIHMGYHGFHNPFTCNMCGVECS 509


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 187,757
Number of Sequences: 336
Number of extensions: 4258
Number of successful extensions: 8
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20961338
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)