BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P16_F_L09
(486 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q3V4A0 Cluster: 18-day embryo whole body cDNA, RIKEN fu... 178 5e-44
UniRef50_Q9UM00 Cluster: Transmembrane and coiled-coil domain-co... 178 5e-44
UniRef50_UPI0000EAFFFA Cluster: UPI0000EAFFFA related cluster; n... 145 4e-34
UniRef50_Q54TU8 Cluster: Putative uncharacterized protein; n=1; ... 115 5e-25
UniRef50_Q9FG04 Cluster: Dbj|BAA86974.1; n=9; Magnoliophyta|Rep:... 115 7e-25
UniRef50_Q23FA1 Cluster: Putative uncharacterized protein; n=1; ... 90 3e-17
UniRef50_A0D1Y0 Cluster: Chromosome undetermined scaffold_342, w... 71 1e-11
UniRef50_UPI000049893D Cluster: conserved hypothetical protein; ... 63 3e-09
UniRef50_Q7RQW5 Cluster: Arabidopsis thaliana At5g06660/F15M7_19... 63 3e-09
UniRef50_Q4UBZ7 Cluster: Putative uncharacterized protein; n=2; ... 56 3e-07
UniRef50_Q5CMV1 Cluster: Dbj|baa86974.1; n=3; Cryptosporidium|Re... 53 4e-06
UniRef50_A2F9D9 Cluster: Putative uncharacterized protein; n=1; ... 49 6e-05
UniRef50_A2D7Z5 Cluster: Putative uncharacterized protein; n=1; ... 44 0.001
UniRef50_A1ZHT1 Cluster: Major facilitator family transporter, p... 33 2.6
UniRef50_A1FWD3 Cluster: Helicase-like; n=1; Stenotrophomonas ma... 33 3.4
UniRef50_Q4Y5S3 Cluster: Putative uncharacterized protein; n=1; ... 33 4.5
UniRef50_Q4UF69 Cluster: Putative uncharacterized protein; n=3; ... 32 7.9
UniRef50_A4VE87 Cluster: Putative uncharacterized protein; n=1; ... 32 7.9
>UniRef50_Q3V4A0 Cluster: 18-day embryo whole body cDNA, RIKEN
full-length enriched library, clone:1190006A08
product:Membrane protein homolog; n=19; Eumetazoa|Rep:
18-day embryo whole body cDNA, RIKEN full-length
enriched library, clone:1190006A08 product:Membrane
protein homolog - Mus musculus (Mouse)
Length = 200
Score = 178 bits (434), Expect = 5e-44
Identities = 89/134 (66%), Positives = 97/134 (72%)
Frame = +3
Query: 3 KKLEKRKEAHGXSLDXXXXXXXXXXXXXXXXXXXDLSLVKMKSMFAIGFAFTALLSMFNS 182
KKLEK+KE S DLS+V+MKSMFAIGF FTAL+ MFNS
Sbjct: 60 KKLEKKKETITESAGRQQKKKIERQEEKLKNNNRDLSMVRMKSMFAIGFCFTALMGMFNS 119
Query: 183 IFDGRVVAKLPFYPISWIQGLSHRNLPGDDYTDCSFIFLYILCTMSIRQNIQKLLGFAPS 362
IFDGRVVAKLPF P+S+IQGLSHRNL GDD TDCSFIFLYILCTMSIRQNIQK+LG APS
Sbjct: 120 IFDGRVVAKLPFTPLSYIQGLSHRNLLGDDTTDCSFIFLYILCTMSIRQNIQKILGLAPS 179
Query: 363 RAASKQGGALFAAP 404
RAA+KQ G P
Sbjct: 180 RAATKQAGGFLGPP 193
>UniRef50_Q9UM00 Cluster: Transmembrane and coiled-coil
domain-containing protein 1; n=18; Euteleostomi|Rep:
Transmembrane and coiled-coil domain-containing protein
1 - Homo sapiens (Human)
Length = 188
Score = 178 bits (434), Expect = 5e-44
Identities = 89/134 (66%), Positives = 97/134 (72%)
Frame = +3
Query: 3 KKLEKRKEAHGXSLDXXXXXXXXXXXXXXXXXXXDLSLVKMKSMFAIGFAFTALLSMFNS 182
KKLEK+KE S DLS+V+MKSMFAIGF FTAL+ MFNS
Sbjct: 48 KKLEKKKETITESAGRQQKKKIERQEEKLKNNNRDLSMVRMKSMFAIGFCFTALMGMFNS 107
Query: 183 IFDGRVVAKLPFYPISWIQGLSHRNLPGDDYTDCSFIFLYILCTMSIRQNIQKLLGFAPS 362
IFDGRVVAKLPF P+S+IQGLSHRNL GDD TDCSFIFLYILCTMSIRQNIQK+LG APS
Sbjct: 108 IFDGRVVAKLPFTPLSYIQGLSHRNLLGDDTTDCSFIFLYILCTMSIRQNIQKILGLAPS 167
Query: 363 RAASKQGGALFAAP 404
RAA+KQ G P
Sbjct: 168 RAATKQAGGFLGPP 181
>UniRef50_UPI0000EAFFFA Cluster: UPI0000EAFFFA related cluster; n=1;
Canis lupus familiaris|Rep: UPI0000EAFFFA UniRef100
entry - Canis familiaris
Length = 241
Score = 145 bits (352), Expect = 4e-34
Identities = 73/113 (64%), Positives = 80/113 (70%)
Frame = +3
Query: 3 KKLEKRKEAHGXSLDXXXXXXXXXXXXXXXXXXXDLSLVKMKSMFAIGFAFTALLSMFNS 182
KKLEK+KE S DLS+V+MKSMFAIGF FTAL+ MFNS
Sbjct: 48 KKLEKKKETITESAGRQQKKKIERQEEKLKNNNRDLSMVRMKSMFAIGFCFTALMGMFNS 107
Query: 183 IFDGRVVAKLPFYPISWIQGLSHRNLPGDDYTDCSFIFLYILCTMSIRQNIQK 341
IFDGRVVAKLPF P+S+IQGLSHRNL GDD TDCSFIFLYILCTMSIRQ +
Sbjct: 108 IFDGRVVAKLPFTPLSYIQGLSHRNLLGDDTTDCSFIFLYILCTMSIRQRTSR 160
>UniRef50_Q54TU8 Cluster: Putative uncharacterized protein; n=1;
Dictyostelium discoideum AX4|Rep: Putative
uncharacterized protein - Dictyostelium discoideum AX4
Length = 186
Score = 115 bits (277), Expect = 5e-25
Identities = 53/96 (55%), Positives = 65/96 (67%)
Frame = +3
Query: 105 DLSLVKMKSMFAIGFAFTALLSMFNSIFDGRVVAKLPFYPISWIQGLSHRNLPGDDYTDC 284
+LS KMKSMFA+ + AL S N IFDG VV KLPF PI ++QG+SHR + GDDYTDC
Sbjct: 84 ELSFSKMKSMFAVAISMIALFSYLNRIFDGVVVCKLPFVPIGFLQGISHRTIAGDDYTDC 143
Query: 285 SFIFLYILCTMSIRQNIQKLLGFAPSRAASKQGGAL 392
S F+Y +C+M IR NIQ +LG AP + AL
Sbjct: 144 SMTFIYAICSMFIRNNIQLILGTAPPKTKQANPWAL 179
>UniRef50_Q9FG04 Cluster: Dbj|BAA86974.1; n=9; Magnoliophyta|Rep:
Dbj|BAA86974.1 - Arabidopsis thaliana (Mouse-ear cress)
Length = 196
Score = 115 bits (276), Expect = 7e-25
Identities = 53/100 (53%), Positives = 70/100 (70%)
Frame = +3
Query: 105 DLSLVKMKSMFAIGFAFTALLSMFNSIFDGRVVAKLPFYPISWIQGLSHRNLPGDDYTDC 284
DLSL K KS + + + NS+F+G+VVAKLPF+PI+ ++ +SHR L GDD TDC
Sbjct: 93 DLSLFKFKSGAVVALVLFVVFGLLNSLFEGKVVAKLPFHPITIVRKMSHRGLKGDDSTDC 152
Query: 285 SFIFLYILCTMSIRQNIQKLLGFAPSRAASKQGGALFAAP 404
S FLY+LC++SIR N+QK LGF+P R A+ GG LF P
Sbjct: 153 SMAFLYLLCSISIRTNLQKFLGFSPPRGAAGAGG-LFPMP 191
>UniRef50_Q23FA1 Cluster: Putative uncharacterized protein; n=1;
Tetrahymena thermophila SB210|Rep: Putative
uncharacterized protein - Tetrahymena thermophila SB210
Length = 432
Score = 89.8 bits (213), Expect = 3e-17
Identities = 47/95 (49%), Positives = 60/95 (63%), Gaps = 2/95 (2%)
Frame = +3
Query: 105 DLSLVKMKSMFAIGFAFTALLSMFNSIFDGRVVAKLPFYPISWIQGLSHRNLPGDDYTDC 284
++S KMKS F I L S+F G +VAKLPF PIS+I GL+HR L G+D++DC
Sbjct: 156 EMSSFKMKSTFLIAIFMIGALYTIGSLFSGLIVAKLPFAPISFITGLTHRGLSGEDFSDC 215
Query: 285 SFIFLYILCTMSIRQNIQKLLGF-AP-SRAASKQG 383
++IF+Y+ R NIQKL GF AP S AS G
Sbjct: 216 AYIFIYVQVAYIWRTNIQKLFGFEAPKSPMASPWG 250
>UniRef50_A0D1Y0 Cluster: Chromosome undetermined scaffold_342,
whole genome shotgun sequence; n=2; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_342,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 184
Score = 71.3 bits (167), Expect = 1e-11
Identities = 34/94 (36%), Positives = 52/94 (55%)
Frame = +3
Query: 105 DLSLVKMKSMFAIGFAFTALLSMFNSIFDGRVVAKLPFYPISWIQGLSHRNLPGDDYTDC 284
+++ KM S A+ ++ + + G VVAKL F P +Q ++HR L G+D TDC
Sbjct: 83 EMTFKKMISNAAVAILSIVTINSIGNYYSGIVVAKLAFEPFWILQQITHRGLNGEDLTDC 142
Query: 285 SFIFLYILCTMSIRQNIQKLLGFAPSRAASKQGG 386
S+IF+YIL + + NIQK+ G + GG
Sbjct: 143 SYIFIYILSALIFKSNIQKIFGLEGPKMPFGPGG 176
>UniRef50_UPI000049893D Cluster: conserved hypothetical protein;
n=1; Entamoeba histolytica HM-1:IMSS|Rep: conserved
hypothetical protein - Entamoeba histolytica HM-1:IMSS
Length = 176
Score = 63.3 bits (147), Expect = 3e-09
Identities = 28/58 (48%), Positives = 36/58 (62%)
Frame = +3
Query: 177 NSIFDGRVVAKLPFYPISWIQGLSHRNLPGDDYTDCSFIFLYILCTMSIRQNIQKLLG 350
N +F V KLPF P S+ ++HRNLPGDD TDCS F Y+L M+ + + KL G
Sbjct: 96 NYMFKPVKVGKLPFQPFSFFTKVTHRNLPGDDMTDCSLFFFYVLMRMAFKPIMAKLFG 153
>UniRef50_Q7RQW5 Cluster: Arabidopsis thaliana At5g06660/F15M7_19,
putative; n=5; Plasmodium|Rep: Arabidopsis thaliana
At5g06660/F15M7_19, putative - Plasmodium yoelii yoelii
Length = 218
Score = 63.3 bits (147), Expect = 3e-09
Identities = 31/84 (36%), Positives = 46/84 (54%)
Frame = +3
Query: 108 LSLVKMKSMFAIGFAFTALLSMFNSIFDGRVVAKLPFYPISWIQGLSHRNLPGDDYTDCS 287
++ +K KS G F +++ + S+F+G +A LPF PI ++ L G + CS
Sbjct: 91 MTALKTKSNIITGLIFLSIMPLLFSLFEGLTIAILPFRPIFPFTLITQTGLQGKNIYHCS 150
Query: 288 FIFLYILCTMSIRQNIQKLLGFAP 359
F+Y L M RQNIQK G+AP
Sbjct: 151 STFIYTLILMLTRQNIQKFFGYAP 174
>UniRef50_Q4UBZ7 Cluster: Putative uncharacterized protein; n=2;
Theileria|Rep: Putative uncharacterized protein -
Theileria annulata
Length = 203
Score = 56.4 bits (130), Expect = 3e-07
Identities = 28/77 (36%), Positives = 42/77 (54%)
Frame = +3
Query: 129 SMFAIGFAFTALLSMFNSIFDGRVVAKLPFYPISWIQGLSHRNLPGDDYTDCSFIFLYIL 308
S F G L+ S+F+ VVAKLPF P+ + +H L G+D TDC+ +Y +
Sbjct: 98 STFITGLLLMGLMPAVMSVFEYSVVAKLPFTPLPPLSMFTHSKLLGNDITDCTATAVYTV 157
Query: 309 CTMSIRQNIQKLLGFAP 359
++ RQ + LLG+ P
Sbjct: 158 ISILARQYTKALLGYFP 174
>UniRef50_Q5CMV1 Cluster: Dbj|baa86974.1; n=3; Cryptosporidium|Rep:
Dbj|baa86974.1 - Cryptosporidium hominis
Length = 195
Score = 52.8 bits (121), Expect = 4e-06
Identities = 28/85 (32%), Positives = 43/85 (50%)
Frame = +3
Query: 108 LSLVKMKSMFAIGFAFTALLSMFNSIFDGRVVAKLPFYPISWIQGLSHRNLPGDDYTDCS 287
+S++KMKS +G F AL+ + N+ F + KLPF PI + ++ L D
Sbjct: 105 ISMIKMKSGILVGILFAALIPLKNTFFGDLPICKLPFEPIKIFRLVTQAGLKNASVDDAG 164
Query: 288 FIFLYILCTMSIRQNIQKLLGFAPS 362
IF++ M+ R IQK + F S
Sbjct: 165 SIFIFGQAFMAFRMAIQKAVYFDTS 189
>UniRef50_A2F9D9 Cluster: Putative uncharacterized protein; n=1;
Trichomonas vaginalis G3|Rep: Putative uncharacterized
protein - Trichomonas vaginalis G3
Length = 184
Score = 48.8 bits (111), Expect = 6e-05
Identities = 26/83 (31%), Positives = 42/83 (50%)
Frame = +3
Query: 105 DLSLVKMKSMFAIGFAFTALLSMFNSIFDGRVVAKLPFYPISWIQGLSHRNLPGDDYTDC 284
D+S M +G + M F +V KLPF S ++ L+HR+L +D +D
Sbjct: 85 DISQAVMLPKMVLGILPWLIPFMLKDYFKNKVCLKLPFEVTSSLKFLTHRDLETEDLSDA 144
Query: 285 SFIFLYILCTMSIRQNIQKLLGF 353
SF F+++L +++ I K L F
Sbjct: 145 SFFFVFMLTNTWLKEAITKALDF 167
>UniRef50_A2D7Z5 Cluster: Putative uncharacterized protein; n=1;
Trichomonas vaginalis G3|Rep: Putative uncharacterized
protein - Trichomonas vaginalis G3
Length = 188
Score = 44.4 bits (100), Expect = 0.001
Identities = 20/61 (32%), Positives = 34/61 (55%)
Frame = +3
Query: 171 MFNSIFDGRVVAKLPFYPISWIQGLSHRNLPGDDYTDCSFIFLYILCTMSIRQNIQKLLG 350
+ S F+ +V K PF I + ++H+ L G+DYT+ SF ++ L + + + KLL
Sbjct: 107 IIGSFFENKVCIKFPFSVIYPLNKMTHKGLDGEDYTEGSFSSVFFLMNLWTNEFVVKLLN 166
Query: 351 F 353
F
Sbjct: 167 F 167
>UniRef50_A1ZHT1 Cluster: Major facilitator family transporter,
putative; n=3; Sphingobacteriales|Rep: Major facilitator
family transporter, putative - Microscilla marina ATCC
23134
Length = 419
Score = 33.5 bits (73), Expect = 2.6
Identities = 17/52 (32%), Positives = 27/52 (51%)
Frame = +3
Query: 111 SLVKMKSMFAIGFAFTALLSMFNSIFDGRVVAKLPFYPISWIQGLSHRNLPG 266
+++++ SM IG A T L+ M ++F G V + +W LSH N G
Sbjct: 308 AIIQLISMVIIGMATTPLMLMMGAVFFGIAVGIMSPTAFAWTIDLSHDNARG 359
>UniRef50_A1FWD3 Cluster: Helicase-like; n=1; Stenotrophomonas
maltophilia R551-3|Rep: Helicase-like - Stenotrophomonas
maltophilia R551-3
Length = 1070
Score = 33.1 bits (72), Expect = 3.4
Identities = 18/65 (27%), Positives = 31/65 (47%), Gaps = 1/65 (1%)
Frame = +3
Query: 228 SWIQGLSHRNLPGDDYT-DCSFIFLYILCTMSIRQNIQKLLGFAPSRAASKQGGALFAAP 404
SW + H NLPG+ + ++ +++R+N+ +L GF P +AA LF
Sbjct: 919 SWCHSIVHWNLPGNPVDLEQREGRVHRYKGLAVRRNVARLAGFVPDQAAGDPWAGLFTNA 978
Query: 405 QTQFK 419
+ K
Sbjct: 979 EVPHK 983
>UniRef50_Q4Y5S3 Cluster: Putative uncharacterized protein; n=1;
Plasmodium chabaudi|Rep: Putative uncharacterized
protein - Plasmodium chabaudi
Length = 95
Score = 32.7 bits (71), Expect = 4.5
Identities = 18/76 (23%), Positives = 38/76 (50%)
Frame = +1
Query: 217 FILFHGFKV*AIGIYLVMITQIVLSYFCTFCVQ*ASDKTYKSCLVLHLLELLQNKVVLYL 396
FI F + +L ++ V +Y+C C+ D +K+C++ +L + + +Y+
Sbjct: 6 FIKLFNFTIVIFFYFLTLLFIYVHTYYCVLCIW-LVDIPWKTCILTYLKIYI---IHIYI 61
Query: 397 LHLRHNSNEVLN*ISN 444
+H+++ N N I N
Sbjct: 62 VHIKYLINRQFNCIYN 77
>UniRef50_Q4UF69 Cluster: Putative uncharacterized protein; n=3;
Theileria|Rep: Putative uncharacterized protein -
Theileria annulata
Length = 504
Score = 31.9 bits (69), Expect = 7.9
Identities = 17/47 (36%), Positives = 27/47 (57%), Gaps = 4/47 (8%)
Frame = +1
Query: 322 SDKTYKSCLVLHLLE-LLQNKVVLYLLHLRH---NSNEVLN*ISNFC 450
S+ Y C +L ++ + +K V+ +LHL H NS +LN +SN C
Sbjct: 397 SNPEYSLCYILGCVKAFIHHKFVIVVLHLDHSIINSTSLLNLLSNLC 443
>UniRef50_A4VE87 Cluster: Putative uncharacterized protein; n=1;
Tetrahymena thermophila SB210|Rep: Putative
uncharacterized protein - Tetrahymena thermophila SB210
Length = 177
Score = 31.9 bits (69), Expect = 7.9
Identities = 16/36 (44%), Positives = 23/36 (63%)
Frame = +1
Query: 322 SDKTYKSCLVLHLLELLQNKVVLYLLHLRHNSNEVL 429
S KTY ++ LL L N+V++ LLHL+ NS + L
Sbjct: 2 SKKTYDRQVLPQLLSLFINRVIISLLHLKINSVQFL 37
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 389,787,912
Number of Sequences: 1657284
Number of extensions: 6917853
Number of successful extensions: 15918
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 15566
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15915
length of database: 575,637,011
effective HSP length: 94
effective length of database: 419,852,315
effective search space used: 28130105105
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -