Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P16_F_L09
         (486 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

03_05_0946 - 29075600-29076229                                        121   3e-28

>03_05_0946 - 29075600-29076229
          Length = 209

 Score =  121 bits (292), Expect = 3e-28
 Identities = 54/100 (54%), Positives = 71/100 (71%)
 Frame = +3

Query: 105 DLSLVKMKSMFAIGFAFTALLSMFNSIFDGRVVAKLPFYPISWIQGLSHRNLPGDDYTDC 284
           +LSL K+KS   +      +  + NS+F+GR VAKLPF P+  +Q +SHR +PG+D TDC
Sbjct: 105 ELSLSKLKSGAVVAAVLFVVFGLLNSLFEGRAVAKLPFAPVPLVQRMSHRGVPGNDPTDC 164

Query: 285 SFIFLYILCTMSIRQNIQKLLGFAPSRAASKQGGALFAAP 404
           S +FLY LC++SIR N+QKLLGFAP RAA+  GG LF  P
Sbjct: 165 SMVFLYFLCSISIRTNLQKLLGFAPPRAAAAAGGGLFPMP 204


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,093,250
Number of Sequences: 37544
Number of extensions: 181443
Number of successful extensions: 397
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 395
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 397
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 999806640
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)