Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P16_F_L09
         (486 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z50044-9|CAA90361.1|  186|Caenorhabditis elegans Hypothetical pr...   175   1e-44
U23179-2|AAK68207.1|  345|Caenorhabditis elegans Serpentine rece...    30   0.77 
U58754-4|AAX22292.1|  332|Caenorhabditis elegans Serpentine rece...    29   1.8  
Z92804-1|CAB07252.1|  338|Caenorhabditis elegans Hypothetical pr...    27   5.5  
Z82284-4|CAB05288.1|  258|Caenorhabditis elegans Hypothetical pr...    27   7.2  
U88176-2|AAO91740.3|  550|Caenorhabditis elegans Hypothetical pr...    27   7.2  

>Z50044-9|CAA90361.1|  186|Caenorhabditis elegans Hypothetical
           protein F22B5.10 protein.
          Length = 186

 Score =  175 bits (426), Expect = 1e-44
 Identities = 85/137 (62%), Positives = 102/137 (74%)
 Frame = +3

Query: 3   KKLEKRKEAHGXSLDXXXXXXXXXXXXXXXXXXXDLSLVKMKSMFAIGFAFTALLSMFNS 182
           KKLEK+K+  G + D                   D+S+ KMKSMFAIG AFTALLS FNS
Sbjct: 45  KKLEKKKQEVGDTNDKNIKRKLEREEERLKATNRDMSMFKMKSMFAIGLAFTALLSTFNS 104

Query: 183 IFDGRVVAKLPFYPISWIQGLSHRNLPGDDYTDCSFIFLYILCTMSIRQNIQKLLGFAPS 362
           IF+GRVVAKLPFYPI +IQGLSHRNL G+D TDCSFIFLYILCTM++RQN+QK+LGFAPS
Sbjct: 105 IFEGRVVAKLPFYPIGFIQGLSHRNLIGEDMTDCSFIFLYILCTMTVRQNLQKILGFAPS 164

Query: 363 RAASKQGGALFAAPQTQ 413
           RA ++Q  + +A P +Q
Sbjct: 165 RAMARQQSSPWAPPNSQ 181


>U23179-2|AAK68207.1|  345|Caenorhabditis elegans Serpentine
           receptor, class b (beta)protein 5 protein.
          Length = 345

 Score = 30.3 bits (65), Expect = 0.77
 Identities = 11/21 (52%), Positives = 15/21 (71%)
 Frame = -3

Query: 355 AKPSNFCMFCLMLIVHRMYKN 293
           AK  NFC  C++LI H+ +KN
Sbjct: 196 AKIGNFCCNCVLLIFHKRFKN 216


>U58754-4|AAX22292.1|  332|Caenorhabditis elegans Serpentine
           receptor, class sx protein15 protein.
          Length = 332

 Score = 29.1 bits (62), Expect = 1.8
 Identities = 13/40 (32%), Positives = 24/40 (60%)
 Frame = +1

Query: 328 KTYKSCLVLHLLELLQNKVVLYLLHLRHNSNEVLN*ISNF 447
           +T K  +VL ++      ++L LLH+ H + EV++ + NF
Sbjct: 216 RTLKYLIVLFVVFRFITSIILNLLHIIHVNREVVSFVENF 255


>Z92804-1|CAB07252.1|  338|Caenorhabditis elegans Hypothetical
           protein K05D4.2 protein.
          Length = 338

 Score = 27.5 bits (58), Expect = 5.5
 Identities = 15/63 (23%), Positives = 29/63 (46%), Gaps = 1/63 (1%)
 Frame = +1

Query: 247 AIGIYLVMIT-QIVLSYFCTFCVQ*ASDKTYKSCLVLHLLELLQNKVVLYLLHLRHNSNE 423
           + GI L ++T      Y C  C +     + ++C +  LL L    +  Y  ++ + SN+
Sbjct: 101 SFGILLALLTIHFYYRYICVACPKKLLRFSLRNCFLWILLVLSNFSIWFYCCYIWNGSND 160

Query: 424 VLN 432
           + N
Sbjct: 161 IKN 163


>Z82284-4|CAB05288.1|  258|Caenorhabditis elegans Hypothetical
           protein T27E7.5 protein.
          Length = 258

 Score = 27.1 bits (57), Expect = 7.2
 Identities = 15/52 (28%), Positives = 26/52 (50%)
 Frame = +1

Query: 214 HFILFHGFKV*AIGIYLVMITQIVLSYFCTFCVQ*ASDKTYKSCLVLHLLEL 369
           HFI  +  K+    +++ +IT I L Y C   +     + Y++ L  H+ EL
Sbjct: 17  HFITNYYAKIVVGTVFIAIITGIWLVYICILTI---FAQVYQTLLACHIFEL 65


>U88176-2|AAO91740.3|  550|Caenorhabditis elegans Hypothetical
           protein F18F11.4 protein.
          Length = 550

 Score = 27.1 bits (57), Expect = 7.2
 Identities = 10/27 (37%), Positives = 16/27 (59%)
 Frame = +2

Query: 341 VAWFCTFSSCFKTRWCSICCTSDTIQM 421
           V WFC  +SCF   +CS+     +I++
Sbjct: 124 VEWFCFNASCFDYLFCSMATRFGSIRL 150


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,423,505
Number of Sequences: 27780
Number of extensions: 181367
Number of successful extensions: 438
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 432
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 438
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 903458030
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)