Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P16_F_L08
         (773 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF043443-1|AAC05668.1|  232|Anopheles gambiae putative pupal-spe...    26   1.5  
AF043434-1|AAC05659.1|  232|Anopheles gambiae putative pupal-spe...    26   1.5  
EF492429-1|ABP35929.1|  155|Anopheles gambiae lysozyme i-2 protein.    24   6.0  
AF043440-1|AAC05665.1|  234|Anopheles gambiae putative pupal-spe...    23   7.9  

>AF043443-1|AAC05668.1|  232|Anopheles gambiae putative
           pupal-specific cuticular proteinCP2d protein.
          Length = 232

 Score = 25.8 bits (54), Expect = 1.5
 Identities = 13/50 (26%), Positives = 22/50 (44%)
 Frame = -3

Query: 423 ASLAPPALGYHHLTTATQSSDH*AWRTC*MGHRHLPVANSSDGLVLRPSH 274
           A +A   + +HH       +   A     + H   P+A+S+  +V  PSH
Sbjct: 177 APVAHATVQHHHAAPIAHYAAPIAHHAAPIAHHAAPIAHSTSSIVHGPSH 226


>AF043434-1|AAC05659.1|  232|Anopheles gambiae putative
           pupal-specific cuticular proteinCP2d protein.
          Length = 232

 Score = 25.8 bits (54), Expect = 1.5
 Identities = 13/50 (26%), Positives = 22/50 (44%)
 Frame = -3

Query: 423 ASLAPPALGYHHLTTATQSSDH*AWRTC*MGHRHLPVANSSDGLVLRPSH 274
           A +A   + +HH       +   A     + H   P+A+S+  +V  PSH
Sbjct: 177 APVAHATVQHHHAAPIAHYAAPIAHHAAPIAHHAAPIAHSTSSIVHGPSH 226


>EF492429-1|ABP35929.1|  155|Anopheles gambiae lysozyme i-2 protein.
          Length = 155

 Score = 23.8 bits (49), Expect = 6.0
 Identities = 11/23 (47%), Positives = 13/23 (56%)
 Frame = -1

Query: 527 SGGPRCGLAFIFAFDSRVTRCTR 459
           +GGPRC  A    F SR  +C R
Sbjct: 122 NGGPRCQGALGGTFASRFYQCLR 144


>AF043440-1|AAC05665.1|  234|Anopheles gambiae putative
           pupal-specific cuticular proteinCP2d protein.
          Length = 234

 Score = 23.4 bits (48), Expect = 7.9
 Identities = 11/40 (27%), Positives = 17/40 (42%)
 Frame = -3

Query: 393 HHLTTATQSSDH*AWRTC*MGHRHLPVANSSDGLVLRPSH 274
           HH       +   A     + H   P+A+S+  +V  PSH
Sbjct: 189 HHAAPIAHYAAPIAHHAAPIAHHAAPIAHSTSSIVHGPSH 228


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 758,717
Number of Sequences: 2352
Number of extensions: 15285
Number of successful extensions: 67
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 66
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 67
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 80665782
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)