BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P16_F_L06
(734 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY146736-1|AAO12096.1| 131|Anopheles gambiae odorant-binding pr... 27 0.79
AJ697723-1|CAG26916.1| 131|Anopheles gambiae putative odorant-b... 27 0.79
AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein p... 26 1.1
>AY146736-1|AAO12096.1| 131|Anopheles gambiae odorant-binding
protein AgamOBP26 protein.
Length = 131
Score = 26.6 bits (56), Expect = 0.79
Identities = 12/43 (27%), Positives = 22/43 (51%)
Frame = +3
Query: 306 PDVGQEISAGDESGALESVKAAAEVYSPVSGTVTEKNTALEST 434
P+ ++ GD +GA + K A+ + +G +T+K E T
Sbjct: 42 PETAAKLKGGDFAGADDKTKCFAKCFLEKAGFMTDKGEIDEKT 84
>AJ697723-1|CAG26916.1| 131|Anopheles gambiae putative
odorant-binding protein OBPjj13 protein.
Length = 131
Score = 26.6 bits (56), Expect = 0.79
Identities = 12/43 (27%), Positives = 22/43 (51%)
Frame = +3
Query: 306 PDVGQEISAGDESGALESVKAAAEVYSPVSGTVTEKNTALEST 434
P+ ++ GD +GA + K A+ + +G +T+K E T
Sbjct: 42 PETAAKLKGGDFAGADDKTKCFAKCFLEKAGFMTDKGEIDEKT 84
>AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein
protein.
Length = 3325
Score = 26.2 bits (55), Expect = 1.1
Identities = 21/62 (33%), Positives = 26/62 (41%)
Frame = -2
Query: 400 VPDTGLYTSAAAFTLSRAPLSSPADISWPTSGSCINTTSPNAS*A*CDTPTVPMFSSIDT 221
VPD YT+ A+ A + PA PTS + T P PT F IDT
Sbjct: 286 VPDPSYYTADASLLHHGAKFNKPAH-QTPTSSGIGSRTHPLYQPDHRAEPTSFDFDRIDT 344
Query: 220 HS 215
+S
Sbjct: 345 YS 346
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 747,208
Number of Sequences: 2352
Number of extensions: 15571
Number of successful extensions: 32
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 32
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 32
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 75260343
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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