BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P16_F_L06
(734 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY075433-1|AAL68248.1| 165|Drosophila melanogaster LP05579p pro... 149 4e-36
AF203725-1|AAF13277.1| 165|Drosophila melanogaster pumpless pro... 149 4e-36
AE014296-3507|AAF51697.3| 165|Drosophila melanogaster CG7758-PA... 149 4e-36
AE013599-2611|AAF57754.1| 1205|Drosophila melanogaster CG5756-PA... 33 0.40
M16152-1|AAB59220.1| 2703|Drosophila melanogaster Notch growth f... 29 5.0
K03508-1|AAA28725.1| 2703|Drosophila melanogaster developmental ... 29 5.0
AL035436-2|CAB37610.1| 2704|Drosophila melanogaster EG:140G11.1,... 29 5.0
AE014298-493|AAF45848.2| 2703|Drosophila melanogaster CG3936-PA ... 29 5.0
>AY075433-1|AAL68248.1| 165|Drosophila melanogaster LP05579p
protein.
Length = 165
Score = 149 bits (361), Expect = 4e-36
Identities = 71/125 (56%), Positives = 87/125 (69%), Gaps = 1/125 (0%)
Frame = +3
Query: 189 KMRYYTKKHEWVSIDENIGT-VGVSHYAQDALGEVVFIQLPDVGQEISAGDESGALESVK 365
K R YT KHEWV + VG+S YAQ+ALG+VVF QLP+ G E+ DE GALESVK
Sbjct: 39 KERRYTNKHEWVEVVSGSNAIVGISSYAQEALGDVVFAQLPEPGTELKQDDECGALESVK 98
Query: 366 AAAEVYSPVSGTVTEKNTALESTPSLVNKSCYGEGWLFRIKLSNRDEVQHLMDQPTYDNY 545
AA+EVYSPVSG V EKN +E TP+LVN SCY +GWLF++ L N E++ LM + Y +
Sbjct: 99 AASEVYSPVSGKVIEKNAEVEDTPALVNSSCYEKGWLFKVDLKNPKELEALMTEDQYKAF 158
Query: 546 LKESG 560
L SG
Sbjct: 159 LSSSG 163
>AF203725-1|AAF13277.1| 165|Drosophila melanogaster pumpless
protein protein.
Length = 165
Score = 149 bits (361), Expect = 4e-36
Identities = 71/125 (56%), Positives = 87/125 (69%), Gaps = 1/125 (0%)
Frame = +3
Query: 189 KMRYYTKKHEWVSIDENIGT-VGVSHYAQDALGEVVFIQLPDVGQEISAGDESGALESVK 365
K R YT KHEWV + VG+S YAQ+ALG+VVF QLP+ G E+ DE GALESVK
Sbjct: 39 KERRYTNKHEWVEVVSGSNAIVGISSYAQEALGDVVFAQLPEPGTELKQDDECGALESVK 98
Query: 366 AAAEVYSPVSGTVTEKNTALESTPSLVNKSCYGEGWLFRIKLSNRDEVQHLMDQPTYDNY 545
AA+EVYSPVSG V EKN +E TP+LVN SCY +GWLF++ L N E++ LM + Y +
Sbjct: 99 AASEVYSPVSGKVIEKNAEVEDTPALVNSSCYEKGWLFKVDLKNPKELEALMTEDQYKAF 158
Query: 546 LKESG 560
L SG
Sbjct: 159 LSSSG 163
>AE014296-3507|AAF51697.3| 165|Drosophila melanogaster CG7758-PA
protein.
Length = 165
Score = 149 bits (361), Expect = 4e-36
Identities = 71/125 (56%), Positives = 87/125 (69%), Gaps = 1/125 (0%)
Frame = +3
Query: 189 KMRYYTKKHEWVSIDENIGT-VGVSHYAQDALGEVVFIQLPDVGQEISAGDESGALESVK 365
K R YT KHEWV + VG+S YAQ+ALG+VVF QLP+ G E+ DE GALESVK
Sbjct: 39 KERRYTNKHEWVEVVSGSNAIVGISSYAQEALGDVVFAQLPEPGTELKQDDECGALESVK 98
Query: 366 AAAEVYSPVSGTVTEKNTALESTPSLVNKSCYGEGWLFRIKLSNRDEVQHLMDQPTYDNY 545
AA+EVYSPVSG V EKN +E TP+LVN SCY +GWLF++ L N E++ LM + Y +
Sbjct: 99 AASEVYSPVSGKVIEKNAEVEDTPALVNSSCYEKGWLFKVDLKNPKELEALMTEDQYKAF 158
Query: 546 LKESG 560
L SG
Sbjct: 159 LSSSG 163
>AE013599-2611|AAF57754.1| 1205|Drosophila melanogaster CG5756-PA,
isoform A protein.
Length = 1205
Score = 33.1 bits (72), Expect = 0.40
Identities = 23/98 (23%), Positives = 48/98 (48%), Gaps = 2/98 (2%)
Frame = +3
Query: 231 DENIGTVGVSHYAQDALGEVVFIQLPDVGQEISAGDESGALESVKAAAEVYS--PVSGTV 404
DE + T+ S E + + P + + ++AG+ES A+ES+ AA + + P+S +
Sbjct: 426 DEEVSTLVASEVTSTPAAEPLKVLAPPLSEVVTAGEES-AIESIGQAAALTASLPISEDI 484
Query: 405 TEKNTALESTPSLVNKSCYGEGWLFRIKLSNRDEVQHL 518
+ E++ + L ++L++ ++ QHL
Sbjct: 485 VRVEQSSEASEKNDAHQEAAKLLLAGVQLTSHNDEQHL 522
>M16152-1|AAB59220.1| 2703|Drosophila melanogaster Notch growth factor
protein.
Length = 2703
Score = 29.5 bits (63), Expect = 5.0
Identities = 19/48 (39%), Positives = 22/48 (45%), Gaps = 2/48 (4%)
Frame = +1
Query: 475 CSASSSQTGMRCSI*WTSRL--TTTISRNLATDHSHSLGLDVAILCNN 612
CS Q +CS WT +L TIS A D GL + LCNN
Sbjct: 1113 CSQMKHQFSCKCSAGWTGKLCDVQTISCQDAADRK---GLSLRQLCNN 1157
>K03508-1|AAA28725.1| 2703|Drosophila melanogaster developmental
protein protein.
Length = 2703
Score = 29.5 bits (63), Expect = 5.0
Identities = 19/48 (39%), Positives = 22/48 (45%), Gaps = 2/48 (4%)
Frame = +1
Query: 475 CSASSSQTGMRCSI*WTSRL--TTTISRNLATDHSHSLGLDVAILCNN 612
CS Q +CS WT +L TIS A D GL + LCNN
Sbjct: 1113 CSQMKHQFSCKCSAGWTGKLCDVQTISCQDAADRK---GLSLRQLCNN 1157
>AL035436-2|CAB37610.1| 2704|Drosophila melanogaster
EG:140G11.1,FBgn0004647;N protein.
Length = 2704
Score = 29.5 bits (63), Expect = 5.0
Identities = 19/48 (39%), Positives = 22/48 (45%), Gaps = 2/48 (4%)
Frame = +1
Query: 475 CSASSSQTGMRCSI*WTSRL--TTTISRNLATDHSHSLGLDVAILCNN 612
CS Q +CS WT +L TIS A D GL + LCNN
Sbjct: 1113 CSQMKHQFSCKCSAGWTGKLCDVQTISCQDAADRK---GLSLRQLCNN 1157
>AE014298-493|AAF45848.2| 2703|Drosophila melanogaster CG3936-PA
protein.
Length = 2703
Score = 29.5 bits (63), Expect = 5.0
Identities = 19/48 (39%), Positives = 22/48 (45%), Gaps = 2/48 (4%)
Frame = +1
Query: 475 CSASSSQTGMRCSI*WTSRL--TTTISRNLATDHSHSLGLDVAILCNN 612
CS Q +CS WT +L TIS A D GL + LCNN
Sbjct: 1113 CSQMKHQFSCKCSAGWTGKLCDVQTISCQDAADRK---GLSLRQLCNN 1157
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 31,848,366
Number of Sequences: 53049
Number of extensions: 667345
Number of successful extensions: 1846
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1777
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1843
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3314233461
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -