Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P16_F_L06
         (734 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z71263-2|CAA95820.1|  146|Caenorhabditis elegans Hypothetical pr...   149   3e-36
Z83103-2|CAB05472.1|  148|Caenorhabditis elegans Hypothetical pr...   142   2e-34
U29380-14|AAA68746.2|  293|Caenorhabditis elegans Trypsin-like p...    28   6.0  
U51998-7|AAA96080.2|  769|Caenorhabditis elegans Hypothetical pr...    28   7.9  
U51998-6|ABS83845.1|  825|Caenorhabditis elegans Hypothetical pr...    28   7.9  
U23510-13|AAK71392.2|  425|Caenorhabditis elegans Hypothetical p...    28   7.9  

>Z71263-2|CAA95820.1|  146|Caenorhabditis elegans Hypothetical
           protein F52A8.5 protein.
          Length = 146

 Score =  149 bits (360), Expect = 3e-36
 Identities = 61/120 (50%), Positives = 93/120 (77%)
 Frame = +3

Query: 195 RYYTKKHEWVSIDENIGTVGVSHYAQDALGEVVFIQLPDVGQEISAGDESGALESVKAAA 374
           R YTKKHEWV ++  +GTVG++ +A + LG+VVFI+LPD G EIS GD +GA+ESVKAA+
Sbjct: 22  RLYTKKHEWVLVENGVGTVGITDFATEQLGDVVFIELPDEGTEISKGDSTGAVESVKAAS 81

Query: 375 EVYSPVSGTVTEKNTALESTPSLVNKSCYGEGWLFRIKLSNRDEVQHLMDQPTYDNYLKE 554
           ++Y+P+SGTVT+KN  LE    L+NKS + +GWL+++K+ + DE++ L+++  Y  + K+
Sbjct: 82  DIYAPISGTVTQKNVKLEEEAGLINKSPFEKGWLYKLKVKSADELEKLLNEEQYAKFKKD 141


>Z83103-2|CAB05472.1|  148|Caenorhabditis elegans Hypothetical
           protein D1025.2 protein.
          Length = 148

 Score =  142 bits (345), Expect = 2e-34
 Identities = 56/120 (46%), Positives = 92/120 (76%)
 Frame = +3

Query: 195 RYYTKKHEWVSIDENIGTVGVSHYAQDALGEVVFIQLPDVGQEISAGDESGALESVKAAA 374
           R YTKKHEW+ +++++GTVG++ +A + LG+VVFI+LP+ G EI  GD +GA+ESVKAA+
Sbjct: 24  RLYTKKHEWIVVNQSVGTVGITDFATEQLGDVVFIELPEAGVEIEKGDSTGAVESVKAAS 83

Query: 375 EVYSPVSGTVTEKNTALESTPSLVNKSCYGEGWLFRIKLSNRDEVQHLMDQPTYDNYLKE 554
           ++Y+PVSG + EKNT LE  P ++NKS   +GWL+R+++++ +++  L+ +  Y+ +  E
Sbjct: 84  DIYAPVSGKILEKNTKLEDEPGIINKSPLEKGWLYRLEITSNEQLNELLTEEQYNKFKSE 143


>U29380-14|AAA68746.2|  293|Caenorhabditis elegans Trypsin-like
           protease protein 1 protein.
          Length = 293

 Score = 28.3 bits (60), Expect = 6.0
 Identities = 11/36 (30%), Positives = 19/36 (52%)
 Frame = +3

Query: 366 AAAEVYSPVSGTVTEKNTALESTPSLVNKSCYGEGW 473
           A   ++ PV+ + T +   L S P++ N+ C   GW
Sbjct: 147 AIMRIHPPVNTSTTARPICLPSLPAVENRLCVVTGW 182


>U51998-7|AAA96080.2|  769|Caenorhabditis elegans Hypothetical
           protein C12D12.1a protein.
          Length = 769

 Score = 27.9 bits (59), Expect = 7.9
 Identities = 19/53 (35%), Positives = 29/53 (54%), Gaps = 1/53 (1%)
 Frame = -2

Query: 433 VDSNAVFFSVTVPDTGLYT-SAAAFTLSRAPLSSPADISWPTSGSCINTTSPN 278
           V +  V  S TVP T   T + AA T S+AP+ + +    PTS + + T+ P+
Sbjct: 582 VTTTVVPSSATVPTTPPTTVTVAATTTSKAPVVTTSPTLAPTSPTKLPTSPPS 634


>U51998-6|ABS83845.1|  825|Caenorhabditis elegans Hypothetical
           protein C12D12.1c protein.
          Length = 825

 Score = 27.9 bits (59), Expect = 7.9
 Identities = 19/53 (35%), Positives = 29/53 (54%), Gaps = 1/53 (1%)
 Frame = -2

Query: 433 VDSNAVFFSVTVPDTGLYT-SAAAFTLSRAPLSSPADISWPTSGSCINTTSPN 278
           V +  V  S TVP T   T + AA T S+AP+ + +    PTS + + T+ P+
Sbjct: 638 VTTTVVPSSATVPTTPPTTVTVAATTTSKAPVVTTSPTLAPTSPTKLPTSPPS 690


>U23510-13|AAK71392.2|  425|Caenorhabditis elegans Hypothetical
           protein R12C12.8a protein.
          Length = 425

 Score = 27.9 bits (59), Expect = 7.9
 Identities = 14/31 (45%), Positives = 19/31 (61%)
 Frame = +3

Query: 432 TPSLVNKSCYGEGWLFRIKLSNRDEVQHLMD 524
           TP L+NK+  GEG L   K++  D   HL+D
Sbjct: 257 TPLLINKASIGEGTLLFTKMA--DSKGHLLD 285


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,188,706
Number of Sequences: 27780
Number of extensions: 335624
Number of successful extensions: 828
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 796
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 828
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1724918872
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)