Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P16_F_L03
         (498 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF125546-1|ABL73930.1|  237|Tribolium castaneum obstractor C2 pr...    23   1.5  
EF125545-1|ABL73929.1|  274|Tribolium castaneum obstractor C1 pr...    23   1.5  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    23   2.0  
EU019710-1|ABU25222.1|  475|Tribolium castaneum dopa decarboxyla...    21   6.2  
AY600513-1|AAT11861.1|  314|Tribolium castaneum spalt-like prote...    21   6.2  

>EF125546-1|ABL73930.1|  237|Tribolium castaneum obstractor C2
           protein.
          Length = 237

 Score = 23.0 bits (47), Expect = 1.5
 Identities = 10/25 (40%), Positives = 12/25 (48%)
 Frame = -2

Query: 353 YDTRIVLKVYKYSITPSERFPLPDD 279
           Y   +VL    YS+   E F  PDD
Sbjct: 4   YACLLVLSALIYSVLGQENFKCPDD 28


>EF125545-1|ABL73929.1|  274|Tribolium castaneum obstractor C1
           protein.
          Length = 274

 Score = 23.0 bits (47), Expect = 1.5
 Identities = 10/25 (40%), Positives = 12/25 (48%)
 Frame = -2

Query: 353 YDTRIVLKVYKYSITPSERFPLPDD 279
           Y   +VL    YS+   E F  PDD
Sbjct: 4   YACLLVLSALIYSVLGQENFKCPDD 28


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 22.6 bits (46), Expect = 2.0
 Identities = 8/18 (44%), Positives = 12/18 (66%)
 Frame = -3

Query: 106  SHWETQGDTEFRSRGTTT 53
            +HW+T+  T   +R TTT
Sbjct: 1181 NHWQTKTTTSTTTRPTTT 1198


>EU019710-1|ABU25222.1|  475|Tribolium castaneum dopa decarboxylase
           protein.
          Length = 475

 Score = 21.0 bits (42), Expect = 6.2
 Identities = 10/41 (24%), Positives = 19/41 (46%)
 Frame = +3

Query: 162 VQGIKGRLNRLPAAGSGDMIVATVKKGKPELRKKVMPAVVI 284
           +QG       +   G+   ++  VKK KPE+    + A ++
Sbjct: 144 IQGTASEATLVALLGAKARMIDRVKKEKPEMSDSEIVAKLV 184


>AY600513-1|AAT11861.1|  314|Tribolium castaneum spalt-like protein
           protein.
          Length = 314

 Score = 21.0 bits (42), Expect = 6.2
 Identities = 9/21 (42%), Positives = 11/21 (52%)
 Frame = +1

Query: 403 PKNVLICGRVLPQTRALSLEY 465
           P   +IC RVL    AL + Y
Sbjct: 134 PNQCVICHRVLSCKSALQMHY 154


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 120,286
Number of Sequences: 336
Number of extensions: 2675
Number of successful extensions: 8
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 11735024
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)