Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P16_F_L02
(784 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U50199-3|AAA91263.1| 555|Caenorhabditis elegans Hypothetical pr... 114 6e-26
AM748820-1|CAO72174.1| 555|Caenorhabditis elegans hexosaminidas... 114 6e-26
Z81504-2|CAB04119.1| 351|Caenorhabditis elegans Hypothetical pr... 31 0.93
Z68220-4|CAA92489.2| 408|Caenorhabditis elegans Hypothetical pr... 29 2.8
AF040651-1|AAB95013.4| 691|Caenorhabditis elegans Nhl (ring fin... 29 2.8
Z14092-11|CAI46627.1| 817|Caenorhabditis elegans Hypothetical p... 29 3.7
Z14092-5|CAD45600.1| 816|Caenorhabditis elegans Hypothetical pr... 29 3.7
Z14092-4|CAD45599.1| 820|Caenorhabditis elegans Hypothetical pr... 29 3.7
Z14092-3|CAA78473.3| 754|Caenorhabditis elegans Hypothetical pr... 29 3.7
U41991-9|AAA83349.1| 297|Caenorhabditis elegans Hypothetical pr... 29 3.7
U23515-11|ABB51179.1| 226|Caenorhabditis elegans Hypothetical p... 28 6.6
Z81475-3|CAB03909.1| 303|Caenorhabditis elegans Hypothetical pr... 28 8.7
>U50199-3|AAA91263.1| 555|Caenorhabditis elegans Hypothetical
protein T14F9.3 protein.
Length = 555
Score = 114 bits (275), Expect = 6e-26
Identities = 65/205 (31%), Positives = 104/205 (50%), Gaps = 3/205 (1%)
Frame = +2
Query: 179 GEVWPKPQKETKSDYFYLFRPDVIQIEIVNKK-CNLLNETIERYTEIWQRQYMIVKRYNN 355
G VWP P+K D I I++ +KK C++L + Y W + + +
Sbjct: 32 GGVWPLPKKIVYGSKNRTITYDKIGIDLGDKKDCDILLSMADNYMNKWLFPFPVEMKTGG 91
Query: 356 ISTHVEPHDIEKYLGVLKRLTINMSAPCEYYPHFD-MDESYNLTVG-ANSQMTSLSVWGM 529
+ +T+ + C P E Y L V + + + +VWG
Sbjct: 92 TEDFI--------------ITVTVKDECPSGPPVHGASEEYLLRVSLTEAVINAQTVWGA 137
Query: 530 MRAFESWTHLLYFTDDSKEIRINKTEIHDFPQYKHRGLLLDTGRHYLSLNTIXKTLDAMS 709
+RA ES +HL+++ S+E +I EI D P++ RG+++D+ RH+LS+N I + L+ MS
Sbjct: 138 LRAMESLSHLVFYDHKSQEYQIRTVEIFDKPRFPVRGIMIDSSRHFLSVNVIKRQLEIMS 197
Query: 710 INKMNVLHWHIXDDQSFPYKSEILP 784
+NK+NVLHWH+ D +SFPY S P
Sbjct: 198 MNKLNVLHWHLVDSESFPYTSVKFP 222
>AM748820-1|CAO72174.1| 555|Caenorhabditis elegans hexosaminidase
protein.
Length = 555
Score = 114 bits (275), Expect = 6e-26
Identities = 65/205 (31%), Positives = 104/205 (50%), Gaps = 3/205 (1%)
Frame = +2
Query: 179 GEVWPKPQKETKSDYFYLFRPDVIQIEIVNKK-CNLLNETIERYTEIWQRQYMIVKRYNN 355
G VWP P+K D I I++ +KK C++L + Y W + + +
Sbjct: 32 GGVWPLPKKIVYGSKNRTITYDKIGIDLGDKKDCDILLSMADNYMNKWLFPFPVEMKTGG 91
Query: 356 ISTHVEPHDIEKYLGVLKRLTINMSAPCEYYPHFD-MDESYNLTVG-ANSQMTSLSVWGM 529
+ +T+ + C P E Y L V + + + +VWG
Sbjct: 92 TEDFI--------------ITVTVKDECPSGPPVHGASEEYLLRVSLTEAVINAQTVWGA 137
Query: 530 MRAFESWTHLLYFTDDSKEIRINKTEIHDFPQYKHRGLLLDTGRHYLSLNTIXKTLDAMS 709
+RA ES +HL+++ S+E +I EI D P++ RG+++D+ RH+LS+N I + L+ MS
Sbjct: 138 LRAMESLSHLVFYDHKSQEYQIRTVEIFDKPRFPVRGIMIDSSRHFLSVNVIKRQLEIMS 197
Query: 710 INKMNVLHWHIXDDQSFPYKSEILP 784
+NK+NVLHWH+ D +SFPY S P
Sbjct: 198 MNKLNVLHWHLVDSESFPYTSVKFP 222
>Z81504-2|CAB04119.1| 351|Caenorhabditis elegans Hypothetical
protein F15H9.2 protein.
Length = 351
Score = 31.1 bits (67), Expect = 0.93
Identities = 23/60 (38%), Positives = 30/60 (50%), Gaps = 1/60 (1%)
Frame = +2
Query: 392 YLGVLKRLT-INMSAPCEYYPHFDMDESYNLTVGANSQMTSLSVWGMMRAFESWTHLLYF 568
YL +T I+MS C Y F M YN V S TS+S++ + AFE + LL F
Sbjct: 53 YLQAASFITEIHMSFLCPGYYFFPMIGGYNTGVEFISSHTSMSIYVFIFAFELPSALLCF 112
>Z68220-4|CAA92489.2| 408|Caenorhabditis elegans Hypothetical
protein T20D3.7 protein.
Length = 408
Score = 29.5 bits (63), Expect = 2.8
Identities = 12/35 (34%), Positives = 21/35 (60%)
Frame = -3
Query: 245 RPGEINKNNRFSFPFAASARPRLASVGTSVRARQY 141
RPG++ +N +F F F +P +GT+V+ R +
Sbjct: 148 RPGDLTQNAQFPFEFNNVEKPFETYMGTNVKLRYF 182
>AF040651-1|AAB95013.4| 691|Caenorhabditis elegans Nhl (ring finger
b-box coiled coil)domain containing protein 3 protein.
Length = 691
Score = 29.5 bits (63), Expect = 2.8
Identities = 16/38 (42%), Positives = 20/38 (52%)
Frame = -3
Query: 353 CCTVLRSYIGAARFPCIVLSFHSVDCTFCLQSLFE*RP 240
C T L +Y G R P ++ HSV C FC+ L E P
Sbjct: 25 CSTCLYTYDGNTRKPKLLPCSHSV-CLFCVTQLAELSP 61
>Z14092-11|CAI46627.1| 817|Caenorhabditis elegans Hypothetical
protein R107.4d protein.
Length = 817
Score = 29.1 bits (62), Expect = 3.7
Identities = 20/67 (29%), Positives = 32/67 (47%), Gaps = 5/67 (7%)
Frame = -2
Query: 585 SFESSVKYKRCVQDSNARIMPQTDKLVICEFA-----PTVRL*LSSMSKCG*YSQGADML 421
S E K +++S R D++ I E P + + S+SKC Y +G D+L
Sbjct: 328 SIEYYAKVADAMRNSKRRTFSSVDQMSIVEHTDMSNVPHLGFSIPSISKCLGYPEGTDIL 387
Query: 420 IVSLFST 400
++S ST
Sbjct: 388 LLSNTST 394
>Z14092-5|CAD45600.1| 816|Caenorhabditis elegans Hypothetical
protein R107.4c protein.
Length = 816
Score = 29.1 bits (62), Expect = 3.7
Identities = 20/67 (29%), Positives = 32/67 (47%), Gaps = 5/67 (7%)
Frame = -2
Query: 585 SFESSVKYKRCVQDSNARIMPQTDKLVICEFA-----PTVRL*LSSMSKCG*YSQGADML 421
S E K +++S R D++ I E P + + S+SKC Y +G D+L
Sbjct: 328 SIEYYAKVADAMRNSKRRTFSSVDQMSIVEHTDMSNVPHLGFSIPSISKCLGYPEGTDIL 387
Query: 420 IVSLFST 400
++S ST
Sbjct: 388 LLSNTST 394
>Z14092-4|CAD45599.1| 820|Caenorhabditis elegans Hypothetical
protein R107.4b protein.
Length = 820
Score = 29.1 bits (62), Expect = 3.7
Identities = 20/67 (29%), Positives = 32/67 (47%), Gaps = 5/67 (7%)
Frame = -2
Query: 585 SFESSVKYKRCVQDSNARIMPQTDKLVICEFA-----PTVRL*LSSMSKCG*YSQGADML 421
S E K +++S R D++ I E P + + S+SKC Y +G D+L
Sbjct: 328 SIEYYAKVADAMRNSKRRTFSSVDQMSIVEHTDMSNVPHLGFSIPSISKCLGYPEGTDIL 387
Query: 420 IVSLFST 400
++S ST
Sbjct: 388 LLSNTST 394
>Z14092-3|CAA78473.3| 754|Caenorhabditis elegans Hypothetical
protein R107.4a protein.
Length = 754
Score = 29.1 bits (62), Expect = 3.7
Identities = 20/67 (29%), Positives = 32/67 (47%), Gaps = 5/67 (7%)
Frame = -2
Query: 585 SFESSVKYKRCVQDSNARIMPQTDKLVICEFA-----PTVRL*LSSMSKCG*YSQGADML 421
S E K +++S R D++ I E P + + S+SKC Y +G D+L
Sbjct: 328 SIEYYAKVADAMRNSKRRTFSSVDQMSIVEHTDMSNVPHLGFSIPSISKCLGYPEGTDIL 387
Query: 420 IVSLFST 400
++S ST
Sbjct: 388 LLSNTST 394
>U41991-9|AAA83349.1| 297|Caenorhabditis elegans Hypothetical
protein C42D4.11 protein.
Length = 297
Score = 29.1 bits (62), Expect = 3.7
Identities = 24/92 (26%), Positives = 40/92 (43%), Gaps = 8/92 (8%)
Frame = +2
Query: 230 LFRPDVIQIEIVNKKCNLLN------ETIERYTEIWQRQYMIVKRYNNISTHVEPHDIE- 388
+ R D +E +K CN N ET IW+ Y +V+RY + E I+
Sbjct: 146 VIRQDGTHVE-ASKACNEYNAALTGLETENETYHIWKTAYSLVERYPSQPKITERIWIDG 204
Query: 389 -KYLGVLKRLTINMSAPCEYYPHFDMDESYNL 481
+ + ++LT N C + FD ++ + L
Sbjct: 205 VRKVTCQEKLTFNTKEGCVSFDGFDFEDKFLL 236
>U23515-11|ABB51179.1| 226|Caenorhabditis elegans Hypothetical
protein R144.3 protein.
Length = 226
Score = 28.3 bits (60), Expect = 6.6
Identities = 16/52 (30%), Positives = 27/52 (51%)
Frame = -2
Query: 633 CLYCGKSWISVLLILISFESSVKYKRCVQDSNARIMPQTDKLVICEFAPTVR 478
CL CGK W +V ++ S+ ++ ++ N++ M Q + VI AP R
Sbjct: 137 CLLCGKKWTTVRRKIMHL--SLAHREIGEEHNSQCMLQVES-VIAPNAPKAR 185
>Z81475-3|CAB03909.1| 303|Caenorhabditis elegans Hypothetical
protein C24H11.3 protein.
Length = 303
Score = 27.9 bits (59), Expect = 8.7
Identities = 15/45 (33%), Positives = 21/45 (46%), Gaps = 2/45 (4%)
Frame = +2
Query: 422 NMSAPCEYYPHFDMDESYNLTVGANSQMTSLSVWGM--MRAFESW 550
N AP Y P F ++YN V N+Q+ W M + +E W
Sbjct: 241 NFVAPQNYQPQFASAQNYNFEVQNNAQL----AWNMYYQKQYEFW 281
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,942,186
Number of Sequences: 27780
Number of extensions: 404748
Number of successful extensions: 1136
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 1085
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1136
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1893203640
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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