Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P16_F_K19
         (818 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxida...   231   4e-63
AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxida...   230   1e-62
S78567-1|AAB34900.1|  141|Tribolium castaneum GABA receptor subu...    22   5.1  
AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory recept...    22   5.1  

>AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxidase
           subunit 2 protein.
          Length = 683

 Score =  231 bits (566), Expect = 4e-63
 Identities = 111/237 (46%), Positives = 155/237 (65%)
 Frame = +2

Query: 107 ESLELLFDRPNEPLITPKGENNSVFQLTEQFLTEDYANNGIELNNRFGDDASEKIPLKNL 286
           ++L LLFDRP EP+   KG   +VF +   +L + Y   G+ L+NRF  DA E +P+K +
Sbjct: 4   KNLLLLFDRPQEPVFIGKGSKKTVFDIPNDYLNDKYKPLGVSLSNRFKQDAEETVPVKKI 63

Query: 287 SKLPEFKIATQLPKDAEFSLFLPKHQEMANELLGVLMDVPENELQDLLSTCAFARVNLNP 466
           S +P      +L +DA FSLF+PKH+ +A  L+ + + +    + DLLS   +AR  +NP
Sbjct: 64  S-IPPLGEILELERDANFSLFIPKHRRIAGRLIDIFLGM--RNVDDLLSVAVYARDRVNP 120

Query: 467 QLFNYCYSVALMHRRDTRKVRVKNFAEVFPSKFLDSQVFTQARETAAXXXXXXXXXXXXX 646
            LF+Y  SVA++HR+DT+ + + +F E FP K++DS+VF +ARE A              
Sbjct: 121 YLFSYALSVAILHRQDTQDIDLPSFIESFPDKYVDSKVFAKAREEATVVPEGSRTPIEIP 180

Query: 647 XXXYTATDLEEEHRLAYWREDIGINLHHYHWHLVYPFTANDLSIVXKDRRGELFFYM 817
              YTA+DLEEEHRLAY+RED+GINLHH+HWHLVYPF A    +V K+RRGELF+YM
Sbjct: 181 RD-YTASDLEEEHRLAYFREDLGINLHHWHWHLVYPFEA-AREVVAKNRRGELFYYM 235


>AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxidase
           subunit 1 protein.
          Length = 682

 Score =  230 bits (562), Expect = 1e-62
 Identities = 113/235 (48%), Positives = 153/235 (65%)
 Frame = +2

Query: 113 LELLFDRPNEPLITPKGENNSVFQLTEQFLTEDYANNGIELNNRFGDDASEKIPLKNLSK 292
           L LLFDRP EP   PKG N  VF +   FL E Y   G+++ NRFG+ A+EKIPLK+++ 
Sbjct: 7   LLLLFDRPQEPAFMPKG-NKEVFDVPNNFLPERYKPIGVQIANRFGEQANEKIPLKDITP 65

Query: 293 LPEFKIATQLPKDAEFSLFLPKHQEMANELLGVLMDVPENELQDLLSTCAFARVNLNPQL 472
            P+ +    L +   FSLF+PKH+++A +L+ + +      + DLLS   F R  +NP L
Sbjct: 66  -PDLEGILDLGRHENFSLFIPKHRKVAGKLIRIFLAA--ESIDDLLSNAVFCRDRVNPYL 122

Query: 473 FNYCYSVALMHRRDTRKVRVKNFAEVFPSKFLDSQVFTQARETAAXXXXXXXXXXXXXXX 652
           F Y +SVAL+HR DT+ + + +F  VFP K++DSQVF +ARE A                
Sbjct: 123 FYYAFSVALLHRPDTQNLDLPSFIHVFPDKYVDSQVFARAREEA-HIVPEGSRTPIEIPQ 181

Query: 653 XYTATDLEEEHRLAYWREDIGINLHHYHWHLVYPFTANDLSIVXKDRRGELFFYM 817
            +TA+DL+EEHR+AYWREDIG+NLHH+HWHLVYPF      IV K+RRGE+F+YM
Sbjct: 182 DFTASDLDEEHRVAYWREDIGLNLHHWHWHLVYPF-EGAREIVDKNRRGEIFYYM 235


>S78567-1|AAB34900.1|  141|Tribolium castaneum GABA receptor subunit
           protein.
          Length = 141

 Score = 22.2 bits (45), Expect = 5.1
 Identities = 10/44 (22%), Positives = 20/44 (45%)
 Frame = +2

Query: 251 DDASEKIPLKNLSKLPEFKIATQLPKDAEFSLFLPKHQEMANEL 382
           ++    + + N   LP+FK+     +  E SL    +  +A E+
Sbjct: 18  NEGPNSVGVSNEVSLPQFKVLGHRQRAMEISLTTGNYSRLACEI 61


>AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory receptor
           candidate 51 protein.
          Length = 771

 Score = 22.2 bits (45), Expect = 5.1
 Identities = 14/49 (28%), Positives = 21/49 (42%)
 Frame = +2

Query: 62  IFYLISILSKMADVFESLELLFDRPNEPLITPKGENNSVFQLTEQFLTE 208
           +FY   I+  M  V +SLE  +   NE  +  + E    F    + L E
Sbjct: 314 MFYEFQIIELMTSVVKSLESRYADLNENFLQCQDEKFESFVYYHRILGE 362


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 189,551
Number of Sequences: 336
Number of extensions: 4260
Number of successful extensions: 17
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 22414104
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)