Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P16_F_K19
(818 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC058287-1|AAH58287.1| 460|Homo sapiens angiopoietin-like 3 pro... 33 1.2
BC007059-1|AAH07059.1| 384|Homo sapiens Unknown (protein for IM... 33 1.2
AY569015-1|AAS66984.1| 460|Homo sapiens angiopoietin-like 3 pro... 33 1.2
AY358273-1|AAQ88640.1| 460|Homo sapiens NL6 protein. 33 1.2
AL138847-1|CAI22994.1| 460|Homo sapiens angiopoietin-like 3 pro... 33 1.2
AF152562-1|AAD34156.1| 460|Homo sapiens angiopoietin-related pr... 33 1.2
L02785-1|AAA58443.1| 764|Homo sapiens DRA protein. 31 3.8
BC025671-1|AAH25671.1| 764|Homo sapiens solute carrier family 2... 31 3.8
AF143407-1|AAF27292.1| 756|Homo sapiens TRK-fused gene/anaplast... 31 3.8
BC021975-1|AAH21975.2| 255|Homo sapiens TSEN2 protein protein. 31 6.6
BC019582-1|AAH19582.1| 465|Homo sapiens tRNA splicing endonucle... 31 6.6
BC004211-1|AAH04211.1| 465|Homo sapiens TSEN2 protein protein. 31 6.6
BC004178-1|AAH04178.1| 465|Homo sapiens TSEN2 protein protein. 31 6.6
AK074794-1|BAC11213.1| 439|Homo sapiens protein ( Homo sapiens ... 31 6.6
D42045-1|BAA07646.2| 1044|Homo sapiens KIAA0086 protein. 30 8.8
DQ871600-1|ABI49507.1| 496|Homo sapiens DCLRE1A protein. 30 8.8
BC013124-1|AAH13124.1| 1040|Homo sapiens DNA cross-link repair 1... 30 8.8
AY607842-1|AAT09762.1| 1040|Homo sapiens DNA cross-link repair 1... 30 8.8
AL592546-2|CAI12637.1| 1040|Homo sapiens DNA cross-link repair 1... 30 8.8
>BC058287-1|AAH58287.1| 460|Homo sapiens angiopoietin-like 3
protein.
Length = 460
Score = 33.1 bits (72), Expect = 1.2
Identities = 25/92 (27%), Positives = 41/92 (44%)
Frame = +2
Query: 194 QFLTEDYANNGIELNNRFGDDASEKIPLKNLSKLPEFKIATQLPKDAEFSLFLPKHQEMA 373
Q E+ N +ELN++ EKI L+ K E ++ + E P+H E+
Sbjct: 107 QVKNEEVKNMSLELNSKLESLLEEKILLQQKVKYLEEQLTNLIQNQPE----TPEHPEVT 162
Query: 374 NELLGVLMDVPENELQDLLSTCAFARVNLNPQ 469
+ L ++ +N ++DLL T LN Q
Sbjct: 163 S--LKTFVEKQDNSIKDLLQTVEDQYKQLNQQ 192
>BC007059-1|AAH07059.1| 384|Homo sapiens Unknown (protein for
IMAGE:3934961) protein.
Length = 384
Score = 33.1 bits (72), Expect = 1.2
Identities = 25/92 (27%), Positives = 41/92 (44%)
Frame = +2
Query: 194 QFLTEDYANNGIELNNRFGDDASEKIPLKNLSKLPEFKIATQLPKDAEFSLFLPKHQEMA 373
Q E+ N +ELN++ EKI L+ K E ++ + E P+H E+
Sbjct: 107 QVKNEEVKNMSLELNSKLESLLEEKILLQQKVKYLEEQLTNLIQNQPE----TPEHPEVT 162
Query: 374 NELLGVLMDVPENELQDLLSTCAFARVNLNPQ 469
+ L ++ +N ++DLL T LN Q
Sbjct: 163 S--LKTFVEKQDNSIKDLLQTVEDQYKQLNQQ 192
>AY569015-1|AAS66984.1| 460|Homo sapiens angiopoietin-like 3
protein.
Length = 460
Score = 33.1 bits (72), Expect = 1.2
Identities = 25/92 (27%), Positives = 41/92 (44%)
Frame = +2
Query: 194 QFLTEDYANNGIELNNRFGDDASEKIPLKNLSKLPEFKIATQLPKDAEFSLFLPKHQEMA 373
Q E+ N +ELN++ EKI L+ K E ++ + E P+H E+
Sbjct: 107 QVKNEEVKNMSLELNSKLESLLEEKILLQQKVKYLEEQLTNLIQNQPE----TPEHPEVT 162
Query: 374 NELLGVLMDVPENELQDLLSTCAFARVNLNPQ 469
+ L ++ +N ++DLL T LN Q
Sbjct: 163 S--LKTFVEKQDNSIKDLLQTVEDQYKQLNQQ 192
>AY358273-1|AAQ88640.1| 460|Homo sapiens NL6 protein.
Length = 460
Score = 33.1 bits (72), Expect = 1.2
Identities = 25/92 (27%), Positives = 41/92 (44%)
Frame = +2
Query: 194 QFLTEDYANNGIELNNRFGDDASEKIPLKNLSKLPEFKIATQLPKDAEFSLFLPKHQEMA 373
Q E+ N +ELN++ EKI L+ K E ++ + E P+H E+
Sbjct: 107 QVKNEEVKNMSLELNSKLESLLEEKILLQQKVKYLEEQLTNLIQNQPE----TPEHPEVT 162
Query: 374 NELLGVLMDVPENELQDLLSTCAFARVNLNPQ 469
+ L ++ +N ++DLL T LN Q
Sbjct: 163 S--LKTFVEKQDNSIKDLLQTVEDQYKQLNQQ 192
>AL138847-1|CAI22994.1| 460|Homo sapiens angiopoietin-like 3
protein.
Length = 460
Score = 33.1 bits (72), Expect = 1.2
Identities = 25/92 (27%), Positives = 41/92 (44%)
Frame = +2
Query: 194 QFLTEDYANNGIELNNRFGDDASEKIPLKNLSKLPEFKIATQLPKDAEFSLFLPKHQEMA 373
Q E+ N +ELN++ EKI L+ K E ++ + E P+H E+
Sbjct: 107 QVKNEEVKNMSLELNSKLESLLEEKILLQQKVKYLEEQLTNLIQNQPE----TPEHPEVT 162
Query: 374 NELLGVLMDVPENELQDLLSTCAFARVNLNPQ 469
+ L ++ +N ++DLL T LN Q
Sbjct: 163 S--LKTFVEKQDNSIKDLLQTVEDQYKQLNQQ 192
>AF152562-1|AAD34156.1| 460|Homo sapiens angiopoietin-related
protein 3 protein.
Length = 460
Score = 33.1 bits (72), Expect = 1.2
Identities = 25/92 (27%), Positives = 41/92 (44%)
Frame = +2
Query: 194 QFLTEDYANNGIELNNRFGDDASEKIPLKNLSKLPEFKIATQLPKDAEFSLFLPKHQEMA 373
Q E+ N +ELN++ EKI L+ K E ++ + E P+H E+
Sbjct: 107 QVKNEEVKNMSLELNSKLESLLEEKILLQQKVKYLEEQLTNLIQNQPE----TPEHPEVT 162
Query: 374 NELLGVLMDVPENELQDLLSTCAFARVNLNPQ 469
+ L ++ +N ++DLL T LN Q
Sbjct: 163 S--LKTFVEKQDNSIKDLLQTVEDQYKQLNQQ 192
>L02785-1|AAA58443.1| 764|Homo sapiens DRA protein.
Length = 764
Score = 31.5 bits (68), Expect = 3.8
Identities = 13/30 (43%), Positives = 19/30 (63%)
Frame = +3
Query: 501 CTDVIPEKSELRILQKYFPLNSWIPKYSLK 590
C P+K++ RI+ FP+ SW+P Y LK
Sbjct: 42 CCSCSPQKAK-RIVLSLFPIASWLPAYRLK 70
>BC025671-1|AAH25671.1| 764|Homo sapiens solute carrier family 26,
member 3 protein.
Length = 764
Score = 31.5 bits (68), Expect = 3.8
Identities = 13/30 (43%), Positives = 19/30 (63%)
Frame = +3
Query: 501 CTDVIPEKSELRILQKYFPLNSWIPKYSLK 590
C P+K++ RI+ FP+ SW+P Y LK
Sbjct: 42 CCSCSPQKAK-RIVLSLFPIASWLPAYRLK 70
>AF143407-1|AAF27292.1| 756|Homo sapiens TRK-fused gene/anaplastic
lymphoma kinase (Ki-1) fusion protein long form protein.
Length = 756
Score = 31.5 bits (68), Expect = 3.8
Identities = 37/156 (23%), Positives = 68/156 (43%)
Frame = +2
Query: 71 LISILSKMADVFESLELLFDRPNEPLITPKGENNSVFQLTEQFLTEDYANNGIELNNRFG 250
LI + +K+ + +SLE P EP + N E+ D ++G +
Sbjct: 109 LIELRNKVNRLLDSLE----PPGEPGPSTNIPENDTVDGREEKSASD--SSGKQSTQVMA 162
Query: 251 DDASEKIPLKNLSKLPEFKIATQLPKDAEFSLFLPKHQEMANELLGVLMDVPENELQDLL 430
S PLKN ++ + ++ D + S++ KHQE+ + + + + PE +L L
Sbjct: 163 ASMSAFDPLKNQDEINKNVMSAFGLTDDQVSVYRRKHQEL--QAMQMELQSPEYKLSKLR 220
Query: 431 STCAFARVNLNPQLFNYCYSVALMHRRDTRKVRVKN 538
++ + NP NYC++ D ++V KN
Sbjct: 221 TSTIM--TDYNP---NYCFAGKTSSISDLKEVPRKN 251
>BC021975-1|AAH21975.2| 255|Homo sapiens TSEN2 protein protein.
Length = 255
Score = 30.7 bits (66), Expect = 6.6
Identities = 17/48 (35%), Positives = 21/48 (43%)
Frame = +3
Query: 477 TIVTLWH*CTDVIPEKSELRILQKYFPLNSWIPKYSLKLVKPQLLFHQ 620
TIV LW T V P + YF W+PK LK LL+ +
Sbjct: 114 TIVKLWKAFTVVQPTFRTTYMAYHYFRSKGWVPKVGLKYGTDLLLYRK 161
>BC019582-1|AAH19582.1| 465|Homo sapiens tRNA splicing endonuclease
2 homolog (S. cerevisiae) protein.
Length = 465
Score = 30.7 bits (66), Expect = 6.6
Identities = 17/48 (35%), Positives = 21/48 (43%)
Frame = +3
Query: 477 TIVTLWH*CTDVIPEKSELRILQKYFPLNSWIPKYSLKLVKPQLLFHQ 620
TIV LW T V P + YF W+PK LK LL+ +
Sbjct: 324 TIVKLWKAFTVVQPTFRTTYMAYHYFRSKGWVPKVGLKYGTDLLLYRK 371
>BC004211-1|AAH04211.1| 465|Homo sapiens TSEN2 protein protein.
Length = 465
Score = 30.7 bits (66), Expect = 6.6
Identities = 17/48 (35%), Positives = 21/48 (43%)
Frame = +3
Query: 477 TIVTLWH*CTDVIPEKSELRILQKYFPLNSWIPKYSLKLVKPQLLFHQ 620
TIV LW T V P + YF W+PK LK LL+ +
Sbjct: 324 TIVKLWKAFTVVQPTFRTTYMAYHYFRSKGWVPKVGLKYGTDLLLYRK 371
>BC004178-1|AAH04178.1| 465|Homo sapiens TSEN2 protein protein.
Length = 465
Score = 30.7 bits (66), Expect = 6.6
Identities = 17/48 (35%), Positives = 21/48 (43%)
Frame = +3
Query: 477 TIVTLWH*CTDVIPEKSELRILQKYFPLNSWIPKYSLKLVKPQLLFHQ 620
TIV LW T V P + YF W+PK LK LL+ +
Sbjct: 324 TIVKLWKAFTVVQPTFRTTYMAYHYFRSKGWVPKVGLKYGTDLLLYRK 371
>AK074794-1|BAC11213.1| 439|Homo sapiens protein ( Homo sapiens
cDNA FLJ90313 fis, clone NT2RP2001388, weakly similar to
TRNA-SPLICING ENDONUCLEASE SUBUNIT SEN2 (EC 3.1.27.9).
).
Length = 439
Score = 30.7 bits (66), Expect = 6.6
Identities = 17/48 (35%), Positives = 21/48 (43%)
Frame = +3
Query: 477 TIVTLWH*CTDVIPEKSELRILQKYFPLNSWIPKYSLKLVKPQLLFHQ 620
TIV LW T V P + YF W+PK LK LL+ +
Sbjct: 298 TIVKLWKAFTVVQPTFRTTYMAYHYFRSKGWVPKVGLKYGTDLLLYRK 345
>D42045-1|BAA07646.2| 1044|Homo sapiens KIAA0086 protein.
Length = 1044
Score = 30.3 bits (65), Expect = 8.8
Identities = 19/64 (29%), Positives = 29/64 (45%), Gaps = 1/64 (1%)
Frame = +2
Query: 278 KNLSKLPEFKIATQLPKDAEFSLFLPKHQEMANELLGVLMDVPENELQD-LLSTCAFARV 454
+NLS P K LP +++ P + M +GV +P ++ LL A +
Sbjct: 528 ENLSSTPAPKYLKILPSGLKYNARHPSTKVMKQMDIGVYFGLPPKRKEEKLLGESALEGI 587
Query: 455 NLNP 466
NLNP
Sbjct: 588 NLNP 591
>DQ871600-1|ABI49507.1| 496|Homo sapiens DCLRE1A protein.
Length = 496
Score = 30.3 bits (65), Expect = 8.8
Identities = 19/64 (29%), Positives = 29/64 (45%), Gaps = 1/64 (1%)
Frame = +2
Query: 278 KNLSKLPEFKIATQLPKDAEFSLFLPKHQEMANELLGVLMDVPENELQD-LLSTCAFARV 454
+NLS P K LP +++ P + M +GV +P ++ LL A +
Sbjct: 332 ENLSSTPAPKYLKILPSGLKYNARHPSTKVMKQMDIGVYFGLPPKRKEEKLLGESALEGI 391
Query: 455 NLNP 466
NLNP
Sbjct: 392 NLNP 395
>BC013124-1|AAH13124.1| 1040|Homo sapiens DNA cross-link repair 1A
(PSO2 homolog, S. cerevisiae) protein.
Length = 1040
Score = 30.3 bits (65), Expect = 8.8
Identities = 19/64 (29%), Positives = 29/64 (45%), Gaps = 1/64 (1%)
Frame = +2
Query: 278 KNLSKLPEFKIATQLPKDAEFSLFLPKHQEMANELLGVLMDVPENELQD-LLSTCAFARV 454
+NLS P K LP +++ P + M +GV +P ++ LL A +
Sbjct: 524 ENLSSTPAPKYLKILPSGLKYNARHPSTKVMKQMDIGVYFGLPPKRKEEKLLGESALEGI 583
Query: 455 NLNP 466
NLNP
Sbjct: 584 NLNP 587
>AY607842-1|AAT09762.1| 1040|Homo sapiens DNA cross-link repair 1A
(PSO2 homolog, S. cerevisiae) protein.
Length = 1040
Score = 30.3 bits (65), Expect = 8.8
Identities = 19/64 (29%), Positives = 29/64 (45%), Gaps = 1/64 (1%)
Frame = +2
Query: 278 KNLSKLPEFKIATQLPKDAEFSLFLPKHQEMANELLGVLMDVPENELQD-LLSTCAFARV 454
+NLS P K LP +++ P + M +GV +P ++ LL A +
Sbjct: 524 ENLSSTPAPKYLKILPSGLKYNARHPSTKVMKQMDIGVYFGLPPKRKEEKLLGESALEGI 583
Query: 455 NLNP 466
NLNP
Sbjct: 584 NLNP 587
>AL592546-2|CAI12637.1| 1040|Homo sapiens DNA cross-link repair 1A
(PSO2 homolog, S. cerevisiae) protein.
Length = 1040
Score = 30.3 bits (65), Expect = 8.8
Identities = 19/64 (29%), Positives = 29/64 (45%), Gaps = 1/64 (1%)
Frame = +2
Query: 278 KNLSKLPEFKIATQLPKDAEFSLFLPKHQEMANELLGVLMDVPENELQD-LLSTCAFARV 454
+NLS P K LP +++ P + M +GV +P ++ LL A +
Sbjct: 524 ENLSSTPAPKYLKILPSGLKYNARHPSTKVMKQMDIGVYFGLPPKRKEEKLLGESALEGI 583
Query: 455 NLNP 466
NLNP
Sbjct: 584 NLNP 587
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 112,780,747
Number of Sequences: 237096
Number of extensions: 2242499
Number of successful extensions: 8351
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 8140
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8351
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10203625794
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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