Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P16_F_K19
         (818 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF038615-1|AAB94149.3|  532|Caenorhabditis elegans Hypothetical ...    31   0.99 
Z81147-10|CAB03533.3|  671|Caenorhabditis elegans Hypothetical p...    29   4.0  
Z70204-1|CAA94111.1|  643|Caenorhabditis elegans Hypothetical pr...    29   4.0  
AL132860-27|CAB60521.1|  365|Caenorhabditis elegans Hypothetical...    29   4.0  
Z83123-13|CAB05615.2| 1208|Caenorhabditis elegans Hypothetical p...    29   5.3  
Z83123-2|CAB05606.1| 1014|Caenorhabditis elegans Hypothetical pr...    29   5.3  
Z70680-10|CAA94577.2| 1208|Caenorhabditis elegans Hypothetical p...    29   5.3  
Z67990-4|CAA91935.1|  369|Caenorhabditis elegans Hypothetical pr...    28   7.0  
U40059-5|AAA81140.1|  191|Caenorhabditis elegans Hypothetical pr...    28   7.0  
AL032654-1|CAA21717.2|  179|Caenorhabditis elegans Hypothetical ...    28   9.2  
AC006683-1|AAK71395.4|  954|Caenorhabditis elegans Adenylyl cycl...    28   9.2  

>AF038615-1|AAB94149.3|  532|Caenorhabditis elegans Hypothetical
           protein R02D3.3 protein.
          Length = 532

 Score = 31.1 bits (67), Expect = 0.99
 Identities = 27/108 (25%), Positives = 49/108 (45%), Gaps = 1/108 (0%)
 Frame = +2

Query: 278 KNLSKLPEFKIATQLPKDAEFSLFLPKHQEMANELLGVLMDVPENELQDLLSTCAFARVN 457
           +NL KL +  +AT+L    +F     + + ++ + +G+      N +Q         R+N
Sbjct: 142 RNLEKLYQNLVATKLITPDDFWSDYYQKEGVSEDKIGINGAFLANIVQQ--EGTNGVRLN 199

Query: 458 LNPQLFNYCYSV-ALMHRRDTRKVRVKNFAEVFPSKFLDSQVFTQARE 598
           LNP++    YS    + +++   V  +   E F  KF  S  F + RE
Sbjct: 200 LNPEIIQAIYSTYPAVQKKNLELVPHEMSEENFWKKFFQSHYFHRERE 247


>Z81147-10|CAB03533.3|  671|Caenorhabditis elegans Hypothetical
           protein T09E11.4 protein.
          Length = 671

 Score = 29.1 bits (62), Expect = 4.0
 Identities = 12/47 (25%), Positives = 21/47 (44%)
 Frame = +2

Query: 401 VPENELQDLLSTCAFARVNLNPQLFNYCYSVALMHRRDTRKVRVKNF 541
           + EN L+  +  C +   NL    FN C  +A        K+++K +
Sbjct: 447 IAENHLKMFIQECGYRSYNLRAYTFNGCEPLAAFETEPHCKIQLKEY 493


>Z70204-1|CAA94111.1|  643|Caenorhabditis elegans Hypothetical
           protein C11G6.1 protein.
          Length = 643

 Score = 29.1 bits (62), Expect = 4.0
 Identities = 22/66 (33%), Positives = 32/66 (48%), Gaps = 2/66 (3%)
 Frame = +1

Query: 541 CRSISL*ILGFPSIHSSS*NRSCYSTRRSTHTYYHSTRLHCDGLRRRTPPCV--LARRYR 714
           C+SI L   GF S+  S+ ++     R   + Y HSTR   + L  RT P    +   ++
Sbjct: 21  CKSI-LRDFGFTSVAQSANSKLAALLRSKINEYAHSTRAFME-LAGRTKPVTNDVIAAFK 78

Query: 715 HQPASL 732
           HQ  SL
Sbjct: 79  HQKVSL 84


>AL132860-27|CAB60521.1|  365|Caenorhabditis elegans Hypothetical
           protein Y56A3A.33 protein.
          Length = 365

 Score = 29.1 bits (62), Expect = 4.0
 Identities = 14/46 (30%), Positives = 21/46 (45%)
 Frame = -2

Query: 577 LGIQEFRGKYFCKILNSDFSGITSVHQCHRVTIVEQLRVQVYSCKG 440
           L +Q    KY CK + S+ SG +S+   H    +   R   + C G
Sbjct: 298 LSLQNLAKKYLCKDVQSEASGHSSIEDSHTCMELLATRHLFFYCHG 343


>Z83123-13|CAB05615.2| 1208|Caenorhabditis elegans Hypothetical
            protein C25G4.10 protein.
          Length = 1208

 Score = 28.7 bits (61), Expect = 5.3
 Identities = 12/35 (34%), Positives = 19/35 (54%)
 Frame = -3

Query: 648  GMIIGMRGTSGGITAAVSRA*VNTWESKNLEGNTS 544
            G  + +RG  G  T   + A  + W+S NLE N++
Sbjct: 1156 GAEVEIRGLGGSATTGTAAATQSEWQSANLEANST 1190


>Z83123-2|CAB05606.1| 1014|Caenorhabditis elegans Hypothetical protein
            T04A11.3 protein.
          Length = 1014

 Score = 28.7 bits (61), Expect = 5.3
 Identities = 12/35 (34%), Positives = 19/35 (54%)
 Frame = -3

Query: 648  GMIIGMRGTSGGITAAVSRA*VNTWESKNLEGNTS 544
            G  + +RG  G  T   + A  + W+S NLE N++
Sbjct: 962  GAEVEIRGLGGSATTGTAAATQSEWQSANLEANST 996


>Z70680-10|CAA94577.2| 1208|Caenorhabditis elegans Hypothetical
            protein C25G4.10 protein.
          Length = 1208

 Score = 28.7 bits (61), Expect = 5.3
 Identities = 12/35 (34%), Positives = 19/35 (54%)
 Frame = -3

Query: 648  GMIIGMRGTSGGITAAVSRA*VNTWESKNLEGNTS 544
            G  + +RG  G  T   + A  + W+S NLE N++
Sbjct: 1156 GAEVEIRGLGGSATTGTAAATQSEWQSANLEANST 1190


>Z67990-4|CAA91935.1|  369|Caenorhabditis elegans Hypothetical
           protein F02D10.4 protein.
          Length = 369

 Score = 28.3 bits (60), Expect = 7.0
 Identities = 15/48 (31%), Positives = 26/48 (54%)
 Frame = +2

Query: 122 LFDRPNEPLITPKGENNSVFQLTEQFLTEDYANNGIELNNRFGDDASE 265
           +++R  +   TP  + N   + TEQ+ T D ++    L+ R+GD  SE
Sbjct: 89  IYERITQAYDTPGRQENGG-RYTEQYDTVDQSSKREHLSQRYGDHVSE 135


>U40059-5|AAA81140.1|  191|Caenorhabditis elegans Hypothetical
           protein K03C7.3 protein.
          Length = 191

 Score = 28.3 bits (60), Expect = 7.0
 Identities = 16/37 (43%), Positives = 20/37 (54%), Gaps = 3/37 (8%)
 Frame = +3

Query: 93  WLTFLKASSCCSIVQMSRSSHPRAKT---ILCFNSQN 194
           +L+FL  S+CCSI+     SH    T    LC NS N
Sbjct: 43  FLSFLSFSTCCSILGWFFLSHSTMHTYFSFLCTNSTN 79


>AL032654-1|CAA21717.2|  179|Caenorhabditis elegans Hypothetical
           protein Y52B11A.1 protein.
          Length = 179

 Score = 27.9 bits (59), Expect = 9.2
 Identities = 14/24 (58%), Positives = 17/24 (70%)
 Frame = +1

Query: 418 TRFAIDMRLCTSKPEPSVVQLLLL 489
           TRF I MR  TSK EP++ +LL L
Sbjct: 96  TRFIISMRDFTSKEEPTLSELLNL 119


>AC006683-1|AAK71395.4|  954|Caenorhabditis elegans Adenylyl cyclase
           protein 4 protein.
          Length = 954

 Score = 27.9 bits (59), Expect = 9.2
 Identities = 16/46 (34%), Positives = 25/46 (54%), Gaps = 3/46 (6%)
 Frame = -2

Query: 604 CGFTSLSEYLGIQEFRGKYFCKILN---SDFSGITSVHQCHRVTIV 476
           CGFT+L+      E+  K    +LN   + F  + S+HQC R+ I+
Sbjct: 250 CGFTNLAS-----EYNPKDLVLMLNELFARFDKVASIHQCMRIKIL 290


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,406,734
Number of Sequences: 27780
Number of extensions: 386455
Number of successful extensions: 1060
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 1020
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1060
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 2019417216
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)