Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P16_F_K16
(755 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY043293-2|AAK96034.1| 353|Tribolium castaneum homeodomain tran... 25 0.49
AF230313-1|AAF64147.1| 210|Tribolium castaneum labial protein p... 25 0.49
AF230312-1|AAF64146.1| 253|Tribolium castaneum labial protein p... 25 0.49
AM292364-1|CAL23176.2| 353|Tribolium castaneum gustatory recept... 24 1.1
AF452568-1|AAL57830.1| 243|Tribolium castaneum homeodomain tran... 22 4.6
AF321227-5|AAK16425.1| 292|Tribolium castaneum Zen2 protein. 22 4.6
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad... 22 6.1
AM292370-1|CAL23182.1| 418|Tribolium castaneum gustatory recept... 22 6.1
AM292335-1|CAL23147.2| 374|Tribolium castaneum gustatory recept... 22 6.1
AY884065-1|AAX84206.1| 697|Tribolium castaneum laccase 1 protein. 21 8.0
AM292361-1|CAL23173.2| 373|Tribolium castaneum gustatory recept... 21 8.0
>AY043293-2|AAK96034.1| 353|Tribolium castaneum homeodomain
transcription factor Labialprotein.
Length = 353
Score = 25.4 bits (53), Expect = 0.49
Identities = 12/36 (33%), Positives = 20/36 (55%), Gaps = 2/36 (5%)
Frame = -3
Query: 681 SPSSYLYYHPNSNDDNNMLNYKYGRIHSNL--GNTS 580
SP Y+H DN ++N + G ++NL GN++
Sbjct: 59 SPQEVYYHHQTIPQDNPIINTETGLSYTNLDYGNSN 94
>AF230313-1|AAF64147.1| 210|Tribolium castaneum labial protein
protein.
Length = 210
Score = 25.4 bits (53), Expect = 0.49
Identities = 12/36 (33%), Positives = 20/36 (55%), Gaps = 2/36 (5%)
Frame = -3
Query: 681 SPSSYLYYHPNSNDDNNMLNYKYGRIHSNL--GNTS 580
SP Y+H DN ++N + G ++NL GN++
Sbjct: 59 SPQEVYYHHQTIPQDNPIINTETGLSYTNLDYGNSN 94
>AF230312-1|AAF64146.1| 253|Tribolium castaneum labial protein
protein.
Length = 253
Score = 25.4 bits (53), Expect = 0.49
Identities = 12/36 (33%), Positives = 20/36 (55%), Gaps = 2/36 (5%)
Frame = -3
Query: 681 SPSSYLYYHPNSNDDNNMLNYKYGRIHSNL--GNTS 580
SP Y+H DN ++N + G ++NL GN++
Sbjct: 59 SPQEVYYHHQTIPQDNPIINTETGLSYTNLDYGNSN 94
>AM292364-1|CAL23176.2| 353|Tribolium castaneum gustatory receptor
candidate 43 protein.
Length = 353
Score = 24.2 bits (50), Expect = 1.1
Identities = 11/32 (34%), Positives = 18/32 (56%), Gaps = 1/32 (3%)
Frame = -1
Query: 287 IYGK-VHNVDLFLHIVLFFYILGTMYLFQLYL 195
IY K H ++ + IVL F+ ++Y F Y+
Sbjct: 51 IYSKSFHRNEIHIKIVLMFFKEASLYCFNYYV 82
>AF452568-1|AAL57830.1| 243|Tribolium castaneum homeodomain
transcription factor Zen2 protein.
Length = 243
Score = 22.2 bits (45), Expect = 4.6
Identities = 12/36 (33%), Positives = 17/36 (47%)
Frame = -3
Query: 693 CFKRSPSSYLYYHPNSNDDNNMLNYKYGRIHSNLGN 586
C + SSY + P N NY+Y + +SN N
Sbjct: 196 CQYDTESSYQFNDPQFN-----FNYQYNQAYSNYNN 226
>AF321227-5|AAK16425.1| 292|Tribolium castaneum Zen2 protein.
Length = 292
Score = 22.2 bits (45), Expect = 4.6
Identities = 12/36 (33%), Positives = 17/36 (47%)
Frame = -3
Query: 693 CFKRSPSSYLYYHPNSNDDNNMLNYKYGRIHSNLGN 586
C + SSY + P N NY+Y + +SN N
Sbjct: 216 CQYDTESSYQFNDPQFN-----FNYQYNQAYSNYNN 246
>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
adhesion molecule splicevariant 3.12.3.1 protein.
Length = 1639
Score = 21.8 bits (44), Expect = 6.1
Identities = 10/31 (32%), Positives = 16/31 (51%)
Frame = -3
Query: 666 LYYHPNSNDDNNMLNYKYGRIHSNLGNTSIT 574
+YY P S DD + +I NL N +++
Sbjct: 1236 VYYKPVSTDDKTEVKPTSQKIVPNLRNQNLS 1266
>AM292370-1|CAL23182.1| 418|Tribolium castaneum gustatory receptor
candidate 49 protein.
Length = 418
Score = 21.8 bits (44), Expect = 6.1
Identities = 7/10 (70%), Positives = 8/10 (80%)
Frame = +3
Query: 288 NQFFLCFTFY 317
N F+LCF FY
Sbjct: 320 NLFYLCFCFY 329
Score = 21.4 bits (43), Expect = 8.0
Identities = 7/14 (50%), Positives = 11/14 (78%)
Frame = -1
Query: 248 IVLFFYILGTMYLF 207
++ F Y++ TMYLF
Sbjct: 287 VMWFGYVIDTMYLF 300
>AM292335-1|CAL23147.2| 374|Tribolium castaneum gustatory receptor
candidate 14 protein.
Length = 374
Score = 21.8 bits (44), Expect = 6.1
Identities = 7/10 (70%), Positives = 8/10 (80%)
Frame = +3
Query: 288 NQFFLCFTFY 317
N F+LCF FY
Sbjct: 276 NLFYLCFCFY 285
Score = 21.4 bits (43), Expect = 8.0
Identities = 7/14 (50%), Positives = 11/14 (78%)
Frame = -1
Query: 248 IVLFFYILGTMYLF 207
++ F Y++ TMYLF
Sbjct: 243 VMWFGYVIDTMYLF 256
>AY884065-1|AAX84206.1| 697|Tribolium castaneum laccase 1 protein.
Length = 697
Score = 21.4 bits (43), Expect = 8.0
Identities = 7/25 (28%), Positives = 16/25 (64%)
Frame = -3
Query: 717 VLITSFLLCFKRSPSSYLYYHPNSN 643
+ + ++CF+R+ S + Y+ N+N
Sbjct: 4 ITLFMIIICFERNLSYKVMYNGNNN 28
>AM292361-1|CAL23173.2| 373|Tribolium castaneum gustatory receptor
candidate 40 protein.
Length = 373
Score = 21.4 bits (43), Expect = 8.0
Identities = 9/21 (42%), Positives = 14/21 (66%)
Frame = -2
Query: 205 NFIFSNHLPVYNIIFINLLES 143
+FIF+ + + IIF NL +S
Sbjct: 264 SFIFNANSAIEGIIFFNLAKS 284
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 158,090
Number of Sequences: 336
Number of extensions: 3217
Number of successful extensions: 14
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20234955
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -