Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P16_F_K16
         (755 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81537-9|CAB04376.2|  673|Caenorhabditis elegans Hypothetical pr...    32   0.38 
Z81537-5|CAB04381.2|  673|Caenorhabditis elegans Hypothetical pr...    32   0.38 
Z81030-4|CAB02708.1|   89|Caenorhabditis elegans Hypothetical pr...    30   2.0  
AC024882-17|AAF60937.1|  321|Caenorhabditis elegans Serpentine r...    28   8.2  

>Z81537-9|CAB04376.2|  673|Caenorhabditis elegans Hypothetical
           protein F41D3.10 protein.
          Length = 673

 Score = 32.3 bits (70), Expect = 0.38
 Identities = 20/66 (30%), Positives = 38/66 (57%), Gaps = 1/66 (1%)
 Frame = -2

Query: 196 FSNHLPVYNIIFINLLESRYSINFSIFYTKSISPGITWRYGF-CFVTFNSIVVSPISLSF 20
           + ++LP+++IIFIN L    S +F       + P +T   GF   ++ N++++S   L++
Sbjct: 248 YVSYLPLFSIIFINALPYTLSTDF-------VRPFVTLVTGFLMMISENNMLLSNKGLAY 300

Query: 19  ISTINY 2
           I  I+Y
Sbjct: 301 IGNISY 306


>Z81537-5|CAB04381.2|  673|Caenorhabditis elegans Hypothetical
           protein F41D3.5 protein.
          Length = 673

 Score = 32.3 bits (70), Expect = 0.38
 Identities = 20/66 (30%), Positives = 38/66 (57%), Gaps = 1/66 (1%)
 Frame = -2

Query: 196 FSNHLPVYNIIFINLLESRYSINFSIFYTKSISPGITWRYGF-CFVTFNSIVVSPISLSF 20
           + ++LP+++IIFIN L    S +F       + P +T   GF   ++ N++++S   L++
Sbjct: 248 YVSYLPLFSIIFINALPYTLSTDF-------VRPFVTLVTGFLMMISENNMLLSNKGLAY 300

Query: 19  ISTINY 2
           I  I+Y
Sbjct: 301 IGNISY 306


>Z81030-4|CAB02708.1|   89|Caenorhabditis elegans Hypothetical
           protein C01G10.6 protein.
          Length = 89

 Score = 29.9 bits (64), Expect = 2.0
 Identities = 13/30 (43%), Positives = 18/30 (60%)
 Frame = -3

Query: 663 YYHPNSNDDNNMLNYKYGRIHSNLGNTSIT 574
           YY+PN+N++N    Y Y   + N GNT  T
Sbjct: 37  YYYPNNNNNNGQNTYYYD--NGNNGNTGTT 64


>AC024882-17|AAF60937.1|  321|Caenorhabditis elegans Serpentine
           receptor, class z protein28 protein.
          Length = 321

 Score = 27.9 bits (59), Expect = 8.2
 Identities = 10/15 (66%), Positives = 14/15 (93%)
 Frame = -2

Query: 514 IYTIFETKEVLTIGL 470
           +YT+F +KE+LTIGL
Sbjct: 147 VYTVFVSKEILTIGL 161


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,721,829
Number of Sequences: 27780
Number of extensions: 276883
Number of successful extensions: 647
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 626
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 646
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1798543458
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)