Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P16_F_K15
         (655 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    26   0.24 
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    26   0.24 
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    26   0.24 
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    26   0.24 
AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosin...    25   0.54 
DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7 prot...    24   1.3  
EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetyla...    21   6.7  
EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetyla...    21   6.7  

>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
            variant 2 protein.
          Length = 1558

 Score = 26.2 bits (55), Expect = 0.24
 Identities = 15/46 (32%), Positives = 22/46 (47%)
 Frame = -1

Query: 139  YL*KHALIVLFIIFTALA*QTPHVQALFH*FRSFKEIQHATRVNRC 2
            YL    + ++F+ F AL      V  LFH F +   I  +T +N C
Sbjct: 1320 YLQLEPIGLVFVFFFALILVIQFVAMLFHRFGTIAHILASTELNLC 1365


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
            variant 1 protein.
          Length = 1558

 Score = 26.2 bits (55), Expect = 0.24
 Identities = 15/46 (32%), Positives = 22/46 (47%)
 Frame = -1

Query: 139  YL*KHALIVLFIIFTALA*QTPHVQALFH*FRSFKEIQHATRVNRC 2
            YL    + ++F+ F AL      V  LFH F +   I  +T +N C
Sbjct: 1320 YLQLEPIGLVFVFFFALILVIQFVAMLFHRFGTIAHILASTELNLC 1365


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase CHS1B
            protein.
          Length = 1558

 Score = 26.2 bits (55), Expect = 0.24
 Identities = 15/46 (32%), Positives = 22/46 (47%)
 Frame = -1

Query: 139  YL*KHALIVLFIIFTALA*QTPHVQALFH*FRSFKEIQHATRVNRC 2
            YL    + ++F+ F AL      V  LFH F +   I  +T +N C
Sbjct: 1320 YLQLEPIGLVFVFFFALILVIQFVAMLFHRFGTIAHILASTELNLC 1365


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase CHS1A
            protein.
          Length = 1558

 Score = 26.2 bits (55), Expect = 0.24
 Identities = 15/46 (32%), Positives = 22/46 (47%)
 Frame = -1

Query: 139  YL*KHALIVLFIIFTALA*QTPHVQALFH*FRSFKEIQHATRVNRC 2
            YL    + ++F+ F AL      V  LFH F +   I  +T +N C
Sbjct: 1320 YLQLEPIGLVFVFFFALILVIQFVAMLFHRFGTIAHILASTELNLC 1365


>AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosine
           kinase Torso-likeprotein protein.
          Length = 803

 Score = 25.0 bits (52), Expect = 0.54
 Identities = 18/57 (31%), Positives = 25/57 (43%), Gaps = 1/57 (1%)
 Frame = +2

Query: 479 SKLFREELERVLDQQMHEGGDAPLLQRIKEMVGGRLHTGSLRGPXCVLPIND-IRGI 646
           SK     LE V      E  +  L   IK+++ GR+   S      V P+N  +RGI
Sbjct: 745 SKSLEGLLENVAQYLQIENVEQTLNHEIKKVIPGRITQKSCSTKRYVTPVNTLVRGI 801


>DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7
           protein.
          Length = 980

 Score = 23.8 bits (49), Expect = 1.3
 Identities = 10/28 (35%), Positives = 17/28 (60%)
 Frame = +2

Query: 377 STEEEDERLKQRPADIDADVREMERRKR 460
           + EE+DE   ++PA +   V+E+  R R
Sbjct: 475 AVEEDDEDAIEKPAPVKISVQEVLNRVR 502


>EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetylase
           2B protein.
          Length = 528

 Score = 21.4 bits (43), Expect = 6.7
 Identities = 16/41 (39%), Positives = 20/41 (48%)
 Frame = -3

Query: 185 TNLNGDRNRH*ARNIIFIKTRTYCSLYNFYSTSLTDTACTG 63
           T LNG R+    +    IK + YCSL N  S +LT     G
Sbjct: 460 TELNGLRDFQEWKEKCDIKGQPYCSLPN--SCALTTRELPG 498


>EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetylase
           2A protein.
          Length = 535

 Score = 21.4 bits (43), Expect = 6.7
 Identities = 16/41 (39%), Positives = 20/41 (48%)
 Frame = -3

Query: 185 TNLNGDRNRH*ARNIIFIKTRTYCSLYNFYSTSLTDTACTG 63
           T LNG R+    +    IK + YCSL N  S +LT     G
Sbjct: 467 TELNGLRDFQEWKEKCDIKGQPYCSLPN--SCALTTRELPG 505


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 138,965
Number of Sequences: 336
Number of extensions: 2902
Number of successful extensions: 8
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16865010
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)