Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P16_F_K15
(655 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AJ297931-1|CAC35451.1| 166|Anopheles gambiae hypothetical prote... 29 0.13
AB090823-2|BAC57922.1| 1154|Anopheles gambiae reverse transcript... 26 0.90
AY330172-1|AAQ16278.1| 170|Anopheles gambiae odorant-binding pr... 25 2.8
AJ618922-1|CAF02001.1| 272|Anopheles gambiae odorant-binding pr... 25 2.8
AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodi... 24 3.7
AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein. 24 4.8
AJ439353-3|CAD27925.1| 1200|Anopheles gambiae putative TPR-conta... 24 4.8
M93690-1|AAA29364.1| 613|Anopheles gambiae ORF1 protein. 23 8.4
CR954256-3|CAJ14144.1| 659|Anopheles gambiae cyclin protein. 23 8.4
AB090817-1|BAC57909.1| 344|Anopheles gambiae gag-like protein p... 23 8.4
>AJ297931-1|CAC35451.1| 166|Anopheles gambiae hypothetical protein
protein.
Length = 166
Score = 29.1 bits (62), Expect = 0.13
Identities = 18/60 (30%), Positives = 29/60 (48%), Gaps = 1/60 (1%)
Frame = +2
Query: 329 MAETDSETIPNGTGPLSTEEEDERLKQRPADID-ADVREMERRKRVEALMSSKLFREELE 505
+ E E +P P E+E+ ++ AD + AD E E + + L ++L EELE
Sbjct: 61 LPEDAPEPVPEDGSPDEEHLEEEQEEEAEADEEEADESESEESEESDELEEARLVAEELE 120
>AB090823-2|BAC57922.1| 1154|Anopheles gambiae reverse transcriptase
protein.
Length = 1154
Score = 26.2 bits (55), Expect = 0.90
Identities = 14/55 (25%), Positives = 27/55 (49%)
Frame = +2
Query: 377 STEEEDERLKQRPADIDADVREMERRKRVEALMSSKLFREELERVLDQQMHEGGD 541
+ + +E+ +RP+ + R ERR + A M+ R + +++ EGGD
Sbjct: 1062 TVRQREEQCGERPSMPSSSPRTSERRANIRARMARLRQRHRQHQQDERRGVEGGD 1116
>AY330172-1|AAQ16278.1| 170|Anopheles gambiae odorant-binding
protein AgamOBP52 protein.
Length = 170
Score = 24.6 bits (51), Expect = 2.8
Identities = 15/40 (37%), Positives = 18/40 (45%), Gaps = 1/40 (2%)
Frame = +3
Query: 507 GSSTSRCTRAATLRSCRGSRRWSAG-DCTPEASGVLXAFC 623
G + RC R +C + RWSA CT GV FC
Sbjct: 134 GFAVDRCVRLLIYENC-PTARWSASVACTKSRQGV--PFC 170
>AJ618922-1|CAF02001.1| 272|Anopheles gambiae odorant-binding
protein OBPjj5a protein.
Length = 272
Score = 24.6 bits (51), Expect = 2.8
Identities = 15/40 (37%), Positives = 18/40 (45%), Gaps = 1/40 (2%)
Frame = +3
Query: 507 GSSTSRCTRAATLRSCRGSRRWSAG-DCTPEASGVLXAFC 623
G + RC R +C + RWSA CT GV FC
Sbjct: 236 GFAVDRCVRLLIYENC-PTARWSASVACTKSRQGV--PFC 272
>AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodium
channel alpha subunitprotein.
Length = 2139
Score = 24.2 bits (50), Expect = 3.7
Identities = 17/56 (30%), Positives = 27/56 (48%)
Frame = +2
Query: 380 TEEEDERLKQRPADIDADVREMERRKRVEALMSSKLFREELERVLDQQMHEGGDAP 547
T E + ++ R AD +A RE+E RKR E +++ E D + + G P
Sbjct: 20 TRESLQAIEARIADEEAKQRELE-RKRAEGESDFGRKKKKKEIRYDDEDEDEGPQP 74
>AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.
Length = 3320
Score = 23.8 bits (49), Expect = 4.8
Identities = 14/35 (40%), Positives = 14/35 (40%)
Frame = -3
Query: 158 H*ARNIIFIKTRTYCSLYNFYSTSLTDTACTGVIS 54
H NII I Y S Y L TAC G S
Sbjct: 3102 HNTSNIIGITEDHYSSCYPIEYNGLLTTACAGTNS 3136
>AJ439353-3|CAD27925.1| 1200|Anopheles gambiae putative TPR-containing
phosphoprotein protein.
Length = 1200
Score = 23.8 bits (49), Expect = 4.8
Identities = 30/102 (29%), Positives = 42/102 (41%), Gaps = 1/102 (0%)
Frame = +3
Query: 339 RTQRRSRTAPGPCPPRRKTSA*SSVRPTSTPMSAKWNAGSASKLLCPRSCSARNWNGSST 518
R++ RSR+ R S R S S +AGS RS S S
Sbjct: 1102 RSRSRSRSGSAKGSRSRSRSGSGGSRSRSRSRSRSQSAGSRKS--GSRSRSRSGSQASRG 1159
Query: 519 SRCTRAATLRSCRGSR-RWSAGDCTPEASGVLXAFCRSTTSE 641
SR +R+ + RS GSR R +G + +AS + + SE
Sbjct: 1160 SRRSRSRS-RSRSGSRSRSRSGSGSRQASPISRKSVSGSESE 1200
>M93690-1|AAA29364.1| 613|Anopheles gambiae ORF1 protein.
Length = 613
Score = 23.0 bits (47), Expect = 8.4
Identities = 9/67 (13%), Positives = 32/67 (47%)
Frame = +2
Query: 368 GPLSTEEEDERLKQRPADIDADVREMERRKRVEALMSSKLFREELERVLDQQMHEGGDAP 547
GP E+ ++ + + + ++ +++++ + + + E ++ QQ H+ +
Sbjct: 216 GPQQQEQRQQQQQHQQREQQQQQQQQQQQQQQQQQQQQRNQQREWQQQQQQQQHQQREQQ 275
Query: 548 LLQRIKE 568
QR+++
Sbjct: 276 QQQRVQQ 282
>CR954256-3|CAJ14144.1| 659|Anopheles gambiae cyclin protein.
Length = 659
Score = 23.0 bits (47), Expect = 8.4
Identities = 15/32 (46%), Positives = 15/32 (46%)
Frame = -3
Query: 470 ELRRASGVPFRGHRRRCRPDAASSARLPPRWT 375
E RR R RRRCRP A R PP T
Sbjct: 490 EGRRRRRAIARARRRRCRPRA---RRNPPATT 518
>AB090817-1|BAC57909.1| 344|Anopheles gambiae gag-like protein
protein.
Length = 344
Score = 23.0 bits (47), Expect = 8.4
Identities = 11/28 (39%), Positives = 18/28 (64%)
Frame = +2
Query: 437 REMERRKRVEALMSSKLFREELERVLDQ 520
++ + RKR EAL+ S EEL ++L +
Sbjct: 109 KQNKPRKRPEALLISDCTSEELAKLLKE 136
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 655,634
Number of Sequences: 2352
Number of extensions: 13941
Number of successful extensions: 58
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 58
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 58
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 64814025
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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