Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P16_F_K13
         (576 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory recept...    23   1.4  
AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory recept...    23   1.4  
AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory recept...    23   1.4  
AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory recept...    23   1.4  
AJ518941-1|CAD57735.1|  456|Tribolium castaneum homothorax protein.    22   3.3  
EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggeri...    22   4.3  

>AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory receptor
           candidate 61 protein.
          Length = 670

 Score = 23.4 bits (48), Expect = 1.4
 Identities = 11/34 (32%), Positives = 17/34 (50%)
 Frame = -1

Query: 555 QNFIDNNLDIHCTFAQVYHYIGCAFSYYTLKKMT 454
           +NF++N   +  T A++  YI     YY    MT
Sbjct: 109 KNFVNNVAALDETLAKLGQYINYETDYYVCLAMT 142


>AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory receptor
           candidate 48 protein.
          Length = 408

 Score = 23.4 bits (48), Expect = 1.4
 Identities = 9/17 (52%), Positives = 13/17 (76%)
 Frame = +3

Query: 459 FSLRCSKRKHTLYNDIL 509
           FS++CS +  +L NDIL
Sbjct: 349 FSVKCSIQSESLLNDIL 365


>AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory receptor
           candidate 44 protein.
          Length = 313

 Score = 23.4 bits (48), Expect = 1.4
 Identities = 12/33 (36%), Positives = 20/33 (60%)
 Frame = -3

Query: 520 YICTSISLYRVCFLLLHLKEND*ISHKYTILFN 422
           +IC ++    VCF++L + E   I  ++TIL N
Sbjct: 159 HICNTVISATVCFMMLLMLE---IWRRFTILNN 188


>AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory receptor
           candidate 4 protein.
          Length = 309

 Score = 23.4 bits (48), Expect = 1.4
 Identities = 12/33 (36%), Positives = 20/33 (60%)
 Frame = -3

Query: 520 YICTSISLYRVCFLLLHLKEND*ISHKYTILFN 422
           +IC ++    VCF++L + E   I  ++TIL N
Sbjct: 155 HICNTVISATVCFMMLLMLE---IWRRFTILNN 184


>AJ518941-1|CAD57735.1|  456|Tribolium castaneum homothorax protein.
          Length = 456

 Score = 22.2 bits (45), Expect = 3.3
 Identities = 11/31 (35%), Positives = 17/31 (54%)
 Frame = +1

Query: 178 VDQIKTFKDFLVQYNKLSELCFNDCIHDFTS 270
           V  I+  +  L++  K+ ELC N C H + S
Sbjct: 148 VQAIQVLRFHLLELEKVHELCDNFC-HRYIS 177


>EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggering
           hormone receptorisoform A protein.
          Length = 434

 Score = 21.8 bits (44), Expect = 4.3
 Identities = 7/21 (33%), Positives = 13/21 (61%)
 Frame = +1

Query: 493 YIMIYLCKCTVYV*IVVNKVL 555
           Y ++Y C+  VY+   +N +L
Sbjct: 330 YNILYFCRIMVYLNSAINPIL 350


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 126,117
Number of Sequences: 336
Number of extensions: 2444
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 14308417
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)