Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P16_F_K13
(576 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U61947-11|AAB03140.1| 90|Caenorhabditis elegans Transport to i... 92 2e-19
AF150108-1|AAD40014.1| 90|Caenorhabditis elegans small zinc fi... 92 2e-19
U61947-12|AAO44913.1| 78|Caenorhabditis elegans Transport to i... 90 1e-18
Z73422-9|CAI46556.1| 111|Caenorhabditis elegans Hypothetical pr... 59 2e-09
AF150109-1|AAD40015.1| 111|Caenorhabditis elegans small zinc fi... 59 2e-09
Z96047-1|CAB09410.1| 108|Caenorhabditis elegans Hypothetical pr... 30 1.4
AF144704-1|AAD39955.1| 108|Caenorhabditis elegans small zinc fi... 30 1.4
Z81491-3|CAB04018.1| 194|Caenorhabditis elegans Hypothetical pr... 29 1.8
Z35663-11|CAA84732.2| 791|Caenorhabditis elegans Hypothetical p... 27 9.5
>U61947-11|AAB03140.1| 90|Caenorhabditis elegans Transport to
inner mitochondrialmembrane (yeast tim) protein 9.1,
isoform a protein.
Length = 90
Score = 92.3 bits (219), Expect = 2e-19
Identities = 41/89 (46%), Positives = 60/89 (67%), Gaps = 1/89 (1%)
Frame = +1
Query: 169 MSEVDQIKTFKDFLVQYNKLSELCFNDCIHDFTSRTLKSTEDKCTVNCMEKYLRMNQRVS 348
M+ I+TF+DFL QYN ++E CFN C+++F SRT+ E+ C NC++K+L+M QRVS
Sbjct: 1 MTSEQNIQTFRDFLTQYNLVAEQCFNSCVNEFGSRTVSGKEESCANNCLDKFLKMTQRVS 60
Query: 349 QRFHEFQML-ANENMLALAQKSGNPS*KV 432
QRF E Q+L A N A+ ++G K+
Sbjct: 61 QRFQEHQLLNAQANGAAIKVENGGKINKI 89
>AF150108-1|AAD40014.1| 90|Caenorhabditis elegans small zinc
finger-like protein protein.
Length = 90
Score = 92.3 bits (219), Expect = 2e-19
Identities = 41/89 (46%), Positives = 60/89 (67%), Gaps = 1/89 (1%)
Frame = +1
Query: 169 MSEVDQIKTFKDFLVQYNKLSELCFNDCIHDFTSRTLKSTEDKCTVNCMEKYLRMNQRVS 348
M+ I+TF+DFL QYN ++E CFN C+++F SRT+ E+ C NC++K+L+M QRVS
Sbjct: 1 MTSEQNIQTFRDFLTQYNLVAEQCFNSCVNEFGSRTVSGKEESCANNCLDKFLKMTQRVS 60
Query: 349 QRFHEFQML-ANENMLALAQKSGNPS*KV 432
QRF E Q+L A N A+ ++G K+
Sbjct: 61 QRFQEHQLLNAQANGAAIKVENGGKINKI 89
>U61947-12|AAO44913.1| 78|Caenorhabditis elegans Transport to
inner mitochondrialmembrane (yeast tim) protein 9.1,
isoform b protein.
Length = 78
Score = 89.8 bits (213), Expect = 1e-18
Identities = 36/69 (52%), Positives = 51/69 (73%)
Frame = +1
Query: 169 MSEVDQIKTFKDFLVQYNKLSELCFNDCIHDFTSRTLKSTEDKCTVNCMEKYLRMNQRVS 348
M+ I+TF+DFL QYN ++E CFN C+++F SRT+ E+ C NC++K+L+M QRVS
Sbjct: 1 MTSEQNIQTFRDFLTQYNLVAEQCFNSCVNEFGSRTVSGKEESCANNCLDKFLKMTQRVS 60
Query: 349 QRFHEFQML 375
QRF E Q+L
Sbjct: 61 QRFQEHQLL 69
>Z73422-9|CAI46556.1| 111|Caenorhabditis elegans Hypothetical
protein B0564.1b protein.
Length = 111
Score = 59.3 bits (137), Expect = 2e-09
Identities = 25/65 (38%), Positives = 37/65 (56%)
Frame = +1
Query: 169 MSEVDQIKTFKDFLVQYNKLSELCFNDCIHDFTSRTLKSTEDKCTVNCMEKYLRMNQRVS 348
M+ + I+ ++FL YN LSE CFN C D+T+ TL E C C++K + +N+R
Sbjct: 1 MNTIQNIQQLREFLTVYNTLSERCFNACARDYTTSTLTKDEGSCVSQCIDKQMLVNRRFM 60
Query: 349 QRFHE 363
F E
Sbjct: 61 LVFAE 65
>AF150109-1|AAD40015.1| 111|Caenorhabditis elegans small zinc
finger-like protein protein.
Length = 111
Score = 59.3 bits (137), Expect = 2e-09
Identities = 25/65 (38%), Positives = 37/65 (56%)
Frame = +1
Query: 169 MSEVDQIKTFKDFLVQYNKLSELCFNDCIHDFTSRTLKSTEDKCTVNCMEKYLRMNQRVS 348
M+ + I+ ++FL YN LSE CFN C D+T+ TL E C C++K + +N+R
Sbjct: 1 MNTIQNIQQLREFLTVYNTLSERCFNACARDYTTSTLTKDEGSCVSQCIDKQMLVNRRFM 60
Query: 349 QRFHE 363
F E
Sbjct: 61 LVFAE 65
>Z96047-1|CAB09410.1| 108|Caenorhabditis elegans Hypothetical
protein DY3.1 protein.
Length = 108
Score = 29.9 bits (64), Expect = 1.4
Identities = 15/42 (35%), Positives = 22/42 (52%)
Frame = +1
Query: 226 LSELCFNDCIHDFTSRTLKSTEDKCTVNCMEKYLRMNQRVSQ 351
+SE C N CI +L S E +C CM++++ VSQ
Sbjct: 41 ISEKCTNKCI-TAPGSSLASGEKQCLQRCMDRFMESWNLVSQ 81
>AF144704-1|AAD39955.1| 108|Caenorhabditis elegans small zinc
finger-like protein protein.
Length = 108
Score = 29.9 bits (64), Expect = 1.4
Identities = 15/42 (35%), Positives = 22/42 (52%)
Frame = +1
Query: 226 LSELCFNDCIHDFTSRTLKSTEDKCTVNCMEKYLRMNQRVSQ 351
+SE C N CI +L S E +C CM++++ VSQ
Sbjct: 41 ISEKCTNKCI-TAPGSSLASGEKQCLQRCMDRFMESWNLVSQ 81
>Z81491-3|CAB04018.1| 194|Caenorhabditis elegans Hypothetical
protein D1086.3 protein.
Length = 194
Score = 29.5 bits (63), Expect = 1.8
Identities = 11/18 (61%), Positives = 13/18 (72%)
Frame = +1
Query: 250 CIHDFTSRTLKSTEDKCT 303
C+ DF S T KST+D CT
Sbjct: 130 CLEDFKSETKKSTKDTCT 147
>Z35663-11|CAA84732.2| 791|Caenorhabditis elegans Hypothetical
protein T04A8.13 protein.
Length = 791
Score = 27.1 bits (57), Expect = 9.5
Identities = 15/41 (36%), Positives = 22/41 (53%)
Frame = -3
Query: 181 QLHSSFXGXAISVXLQEKFRTV*LFRIFTRFRLKLKIDLRF 59
+LH S S ++K T+ RIF RF +KL+ +RF
Sbjct: 297 RLHISLFLPIFSSFPEKKASTLNTSRIFVRFLMKLRPQIRF 337
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,932,860
Number of Sequences: 27780
Number of extensions: 227290
Number of successful extensions: 513
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 498
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 513
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1194789454
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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