Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P16_F_K12
(740 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY155490-1|AAO12861.1| 342|Apis mellifera Ammar1 transposase pr... 23 4.0
AB167961-1|BAD51404.1| 554|Apis mellifera E74 protein. 23 4.0
AY569719-1|AAS86672.1| 401|Apis mellifera feminizer protein. 22 7.0
AY569718-1|AAS86671.1| 401|Apis mellifera feminizer protein. 22 7.0
AY569715-1|AAS86668.1| 401|Apis mellifera feminizer protein. 22 7.0
AY569713-1|AAS86666.1| 401|Apis mellifera feminizer protein. 22 7.0
AY569711-1|AAS86664.1| 401|Apis mellifera feminizer protein. 22 7.0
AY569702-1|AAS86655.1| 400|Apis mellifera feminizer protein. 22 7.0
AY350616-1|AAQ57658.1| 401|Apis mellifera complementary sex det... 22 7.0
DQ325124-1|ABD14138.1| 179|Apis mellifera complementary sex det... 21 9.2
DQ325123-1|ABD14137.1| 179|Apis mellifera complementary sex det... 21 9.2
DQ325122-1|ABD14136.1| 179|Apis mellifera complementary sex det... 21 9.2
>AY155490-1|AAO12861.1| 342|Apis mellifera Ammar1 transposase
protein.
Length = 342
Score = 22.6 bits (46), Expect = 4.0
Identities = 12/39 (30%), Positives = 19/39 (48%)
Frame = +1
Query: 490 QRGTIARLRQDRWSRELERAGHPTRRLEQCPLRELRRKN 606
Q G + +L D W + H T+R+ C L + R +N
Sbjct: 106 QLGYVQKL--DTWVPHELKEKHLTQRINSCDLLKKRNEN 142
>AB167961-1|BAD51404.1| 554|Apis mellifera E74 protein.
Length = 554
Score = 22.6 bits (46), Expect = 4.0
Identities = 9/27 (33%), Positives = 13/27 (48%)
Frame = +2
Query: 434 PHKYTSTVQSNYSAHTPGYNVGQSPGY 514
P ++ VQ+ Y H PG+ P Y
Sbjct: 199 PQQHGLGVQNGYGRHLPGHAQMGRPSY 225
>AY569719-1|AAS86672.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 21.8 bits (44), Expect = 7.0
Identities = 10/21 (47%), Positives = 14/21 (66%)
Frame = +2
Query: 359 ISSDYAKPASPTYQNTSSFHS 421
ISS+ + S ++Q TSS HS
Sbjct: 212 ISSNSLRSRSRSFQRTSSCHS 232
>AY569718-1|AAS86671.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 21.8 bits (44), Expect = 7.0
Identities = 10/21 (47%), Positives = 14/21 (66%)
Frame = +2
Query: 359 ISSDYAKPASPTYQNTSSFHS 421
ISS+ + S ++Q TSS HS
Sbjct: 212 ISSNSLRSRSRSFQRTSSCHS 232
>AY569715-1|AAS86668.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 21.8 bits (44), Expect = 7.0
Identities = 10/21 (47%), Positives = 14/21 (66%)
Frame = +2
Query: 359 ISSDYAKPASPTYQNTSSFHS 421
ISS+ + S ++Q TSS HS
Sbjct: 212 ISSNSLRSRSRSFQRTSSCHS 232
>AY569713-1|AAS86666.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 21.8 bits (44), Expect = 7.0
Identities = 10/21 (47%), Positives = 14/21 (66%)
Frame = +2
Query: 359 ISSDYAKPASPTYQNTSSFHS 421
ISS+ + S ++Q TSS HS
Sbjct: 212 ISSNSLRSRSRSFQRTSSCHS 232
>AY569711-1|AAS86664.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 21.8 bits (44), Expect = 7.0
Identities = 10/21 (47%), Positives = 14/21 (66%)
Frame = +2
Query: 359 ISSDYAKPASPTYQNTSSFHS 421
ISS+ + S ++Q TSS HS
Sbjct: 212 ISSNSLRSRSRSFQRTSSCHS 232
>AY569702-1|AAS86655.1| 400|Apis mellifera feminizer protein.
Length = 400
Score = 21.8 bits (44), Expect = 7.0
Identities = 10/21 (47%), Positives = 14/21 (66%)
Frame = +2
Query: 359 ISSDYAKPASPTYQNTSSFHS 421
ISS+ + S ++Q TSS HS
Sbjct: 212 ISSNSLRSRSRSFQRTSSCHS 232
>AY350616-1|AAQ57658.1| 401|Apis mellifera complementary sex
determiner protein.
Length = 401
Score = 21.8 bits (44), Expect = 7.0
Identities = 10/21 (47%), Positives = 14/21 (66%)
Frame = +2
Query: 359 ISSDYAKPASPTYQNTSSFHS 421
ISS+ + S ++Q TSS HS
Sbjct: 212 ISSNSLRSRSRSFQRTSSCHS 232
>DQ325124-1|ABD14138.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 21.4 bits (43), Expect = 9.2
Identities = 8/23 (34%), Positives = 13/23 (56%)
Frame = +2
Query: 422 EKMTPHKYTSTVQSNYSAHTPGY 490
EK HK S++ +NY+ + Y
Sbjct: 74 EKSKEHKIISSLSNNYNYNNNNY 96
>DQ325123-1|ABD14137.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 21.4 bits (43), Expect = 9.2
Identities = 8/23 (34%), Positives = 13/23 (56%)
Frame = +2
Query: 422 EKMTPHKYTSTVQSNYSAHTPGY 490
EK HK S++ +NY+ + Y
Sbjct: 74 EKSKEHKIISSLSNNYNYNNNNY 96
>DQ325122-1|ABD14136.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 21.4 bits (43), Expect = 9.2
Identities = 8/23 (34%), Positives = 13/23 (56%)
Frame = +2
Query: 422 EKMTPHKYTSTVQSNYSAHTPGY 490
EK HK S++ +NY+ + Y
Sbjct: 74 EKSKEHKIISSLSNNYNYNNNNY 96
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 184,187
Number of Sequences: 438
Number of extensions: 4123
Number of successful extensions: 13
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 23144850
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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