Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P16_F_K09
         (811 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxida...   219   2e-59
AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxida...   219   3e-59
S78567-1|AAB34900.1|  141|Tribolium castaneum GABA receptor subu...    22   5.0  

>AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxidase
           subunit 2 protein.
          Length = 683

 Score =  219 bits (536), Expect = 2e-59
 Identities = 106/231 (45%), Positives = 149/231 (64%)
 Frame = +1

Query: 118 ESLELLFDRPNEPLITPKGENNSVFQLTEQFLTEDYANNGIELNNRFGDDASEKIPLKNL 297
           ++L LLFDRP EP+   KG   +VF +   +L + Y   G+ L+NRF  DA E +P+K +
Sbjct: 4   KNLLLLFDRPQEPVFIGKGSKKTVFDIPNDYLNDKYKPLGVSLSNRFKQDAEETVPVKKI 63

Query: 298 SKLPEFKIATQLPKDAEFSLFLPKHQEMANELLGVLMDVPENELQDLLSTCAFARVNLNP 477
           S +P      +L +DA FSLF+PKH+ +A  L+ + + +    + DLLS   +AR  +NP
Sbjct: 64  S-IPPLGEILELERDANFSLFIPKHRRIAGRLIDIFLGM--RNVDDLLSVAVYARDRVNP 120

Query: 478 QLFNYCYSVALMHRRDTRKVRVKNFAEVFPSKFLDSQVFTQARETAAXXXXXXXXXXXXX 657
            LF+Y  SVA++HR+DT+ + + +F E FP K++DS+VF +ARE A              
Sbjct: 121 YLFSYALSVAILHRQDTQDIDLPSFIESFPDKYVDSKVFAKAREEATVVPEGSRTPIEIP 180

Query: 658 XXXYTATDLEEEHRLAYWREDIGINLHHYHWHLVYPFTANDLSIVXKDRRG 810
              YTA+DLEEEHRLAY+RED+GINLHH+HWHLVYPF A    +V K+RRG
Sbjct: 181 RD-YTASDLEEEHRLAYFREDLGINLHHWHWHLVYPFEA-AREVVAKNRRG 229


>AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxidase
           subunit 1 protein.
          Length = 682

 Score =  219 bits (534), Expect = 3e-59
 Identities = 109/229 (47%), Positives = 147/229 (64%)
 Frame = +1

Query: 124 LELLFDRPNEPLITPKGENNSVFQLTEQFLTEDYANNGIELNNRFGDDASEKIPLKNLSK 303
           L LLFDRP EP   PKG N  VF +   FL E Y   G+++ NRFG+ A+EKIPLK+++ 
Sbjct: 7   LLLLFDRPQEPAFMPKG-NKEVFDVPNNFLPERYKPIGVQIANRFGEQANEKIPLKDITP 65

Query: 304 LPEFKIATQLPKDAEFSLFLPKHQEMANELLGVLMDVPENELQDLLSTCAFARVNLNPQL 483
            P+ +    L +   FSLF+PKH+++A +L+ + +      + DLLS   F R  +NP L
Sbjct: 66  -PDLEGILDLGRHENFSLFIPKHRKVAGKLIRIFLAA--ESIDDLLSNAVFCRDRVNPYL 122

Query: 484 FNYCYSVALMHRRDTRKVRVKNFAEVFPSKFLDSQVFTQARETAAXXXXXXXXXXXXXXX 663
           F Y +SVAL+HR DT+ + + +F  VFP K++DSQVF +ARE A                
Sbjct: 123 FYYAFSVALLHRPDTQNLDLPSFIHVFPDKYVDSQVFARAREEA-HIVPEGSRTPIEIPQ 181

Query: 664 XYTATDLEEEHRLAYWREDIGINLHHYHWHLVYPFTANDLSIVXKDRRG 810
            +TA+DL+EEHR+AYWREDIG+NLHH+HWHLVYPF      IV K+RRG
Sbjct: 182 DFTASDLDEEHRVAYWREDIGLNLHHWHWHLVYPF-EGAREIVDKNRRG 229


>S78567-1|AAB34900.1|  141|Tribolium castaneum GABA receptor subunit
           protein.
          Length = 141

 Score = 22.2 bits (45), Expect = 5.0
 Identities = 10/44 (22%), Positives = 20/44 (45%)
 Frame = +1

Query: 262 DDASEKIPLKNLSKLPEFKIATQLPKDAEFSLFLPKHQEMANEL 393
           ++    + + N   LP+FK+     +  E SL    +  +A E+
Sbjct: 18  NEGPNSVGVSNEVSLPQFKVLGHRQRAMEISLTTGNYSRLACEI 61


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 183,042
Number of Sequences: 336
Number of extensions: 4024
Number of successful extensions: 14
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 22102797
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)