Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P16_F_K09
(811 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC56F8.10 |met9|met5|methylenetetrahydrofolate reductase Met9|... 30 0.45
SPCC320.05 |||sulphate transporter |Schizosaccharomyces pombe|ch... 27 2.4
SPCC290.04 |ams2|SPCC4F11.01|cell cycle regulated GATA-type tran... 27 2.4
SPCC895.07 |alp14|mtc1|Mad2-dependent spindle checkpoint compone... 27 4.2
SPCC14G10.02 ||SPCC18B5.13|ribosome biogenesis protein Urb1|Schi... 26 5.5
SPBC30D10.17c |||glucan synthase regulator |Schizosaccharomyces ... 26 5.5
SPCC162.02c |||AMP-binding dehydrogenase |Schizosaccharomyces po... 26 5.5
SPAC4F10.06 |||BUD22 family protein|Schizosaccharomyces pombe|ch... 26 5.5
SPAP7G5.04c |lys1||aminoadipate-semialdehyde dehydrogenase |Schi... 26 5.5
SPAPB1A10.04c |cwp1||geranylgeranyltransferase I alpha subunit C... 26 5.5
SPBC216.05 |rad3||ATR checkpoint kinase|Schizosaccharomyces pomb... 26 7.3
SPCC4B3.12 |set9||histone lysine methyltransferase Set9|Schizosa... 25 9.6
>SPAC56F8.10 |met9|met5|methylenetetrahydrofolate reductase
Met9|Schizosaccharomyces pombe|chr 1|||Manual
Length = 603
Score = 29.9 bits (64), Expect = 0.45
Identities = 12/43 (27%), Positives = 22/43 (51%)
Frame = -2
Query: 660 WNDNRYAWNVWWNNSCGFTSLSEYLGIQEFRGKYFCKILNSDF 532
W D Y+ + W N+ S+S L + + + C I+++DF
Sbjct: 532 WKDEAYSLGMEWANAYSPDSISRKLLVSMMKEWFLCVIVDNDF 574
>SPCC320.05 |||sulphate transporter |Schizosaccharomyces pombe|chr
3|||Manual
Length = 667
Score = 27.5 bits (58), Expect = 2.4
Identities = 15/50 (30%), Positives = 23/50 (46%)
Frame = +2
Query: 452 PLHE*T*TLSCSTIVTLWH*CTDVIPEKSELRILQKYFPLNSWIPKYSLK 601
PLHE S + + W + S +R + Y P+ W+P YSL+
Sbjct: 26 PLHEIPSYQSLARRSSTWKRANIPQQKPSLVRRINYYIPVLHWLPNYSLR 75
>SPCC290.04 |ams2|SPCC4F11.01|cell cycle regulated GATA-type
transcription factor Ams2|Schizosaccharomyces pombe|chr
3|||Manual
Length = 697
Score = 27.5 bits (58), Expect = 2.4
Identities = 24/91 (26%), Positives = 44/91 (48%)
Frame = +1
Query: 118 ESLELLFDRPNEPLITPKGENNSVFQLTEQFLTEDYANNGIELNNRFGDDASEKIPLKNL 297
+ LE F P +P K + + +E FL+ D N + ++ D S+ L ++
Sbjct: 578 DDLECYFRTPPKPTTLQKQQQSPSPWRSELFLS-DPDQNVLTPRHKPKFDLSKA--LSSV 634
Query: 298 SKLPEFKIATQLPKDAEFSLFLPKHQEMANE 390
+K + + QLP+ +FSL L + ++ NE
Sbjct: 635 AKSNNIENSPQLPERYDFSLELGLNSQLDNE 665
>SPCC895.07 |alp14|mtc1|Mad2-dependent spindle checkpoint component
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 809
Score = 26.6 bits (56), Expect = 4.2
Identities = 35/136 (25%), Positives = 62/136 (45%)
Frame = +1
Query: 97 SKMADVFESLELLFDRPNEPLITPKGENNSVFQLTEQFLTEDYANNGIELNNRFGDDASE 276
SK D E+L+ L ++P I N V LT+ +++D AN + +N A
Sbjct: 298 SKWKDRKEALDKLLPVLSQPKIKDNDFFNLVAILTKS-VSKD-ANIMVVINAAHCIQAMA 355
Query: 277 KIPLKNLSKLPEFKIATQLPKDAEFSLFLPKHQEMANELLGVLMDVPENELQDLLSTCAF 456
K N SK I L + E + + +++ + VL ++L +L+++ A
Sbjct: 356 KGLRSNFSKYASTSINALLERSKEKKANVI--ESLSSAMDAVLATSSLDDLAELIASFAG 413
Query: 457 ARVNLNPQLFNYCYSV 504
N NPQ+ + C+S+
Sbjct: 414 ---NKNPQIKSSCFSL 426
>SPCC14G10.02 ||SPCC18B5.13|ribosome biogenesis protein
Urb1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1568
Score = 26.2 bits (55), Expect = 5.5
Identities = 19/69 (27%), Positives = 33/69 (47%)
Frame = +1
Query: 295 LSKLPEFKIATQLPKDAEFSLFLPKHQEMANELLGVLMDVPENELQDLLSTCAFARVNLN 474
L +LP+ + QL E L + ++ LL PEN L+ + T F R++L+
Sbjct: 412 LLRLPDSQTFVQLYSSTESDLL---KEGLSRILLYFFTYFPENILKLKIDTSIFLRLDLS 468
Query: 475 PQLFNYCYS 501
P + + +S
Sbjct: 469 PGMLDRPFS 477
>SPBC30D10.17c |||glucan synthase regulator |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 504
Score = 26.2 bits (55), Expect = 5.5
Identities = 10/43 (23%), Positives = 24/43 (55%)
Frame = +1
Query: 310 EFKIATQLPKDAEFSLFLPKHQEMANELLGVLMDVPENELQDL 438
E+++ LP+D SL++ Q+ + G+L V +++++
Sbjct: 163 EYELECTLPRDVRESLYIHDGQDRGGQPTGILFGVTLLDIEEI 205
>SPCC162.02c |||AMP-binding dehydrogenase |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 981
Score = 26.2 bits (55), Expect = 5.5
Identities = 10/28 (35%), Positives = 18/28 (64%)
Frame = +1
Query: 160 ITPKGENNSVFQLTEQFLTEDYANNGIE 243
+TP +++ L+E FLT++ NG+E
Sbjct: 949 MTPSNGLRNIYPLSETFLTKEAIANGLE 976
>SPAC4F10.06 |||BUD22 family protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 388
Score = 26.2 bits (55), Expect = 5.5
Identities = 30/116 (25%), Positives = 49/116 (42%), Gaps = 1/116 (0%)
Frame = +1
Query: 262 DDASEKIPLKNLSKLPEFKIATQLPKDAEFSLFLPKHQEMANELLGVLMDVPENELQDLL 441
DD +KIPL K KI+ L K + F + Q++ + + L
Sbjct: 21 DDVPKKIPL--FKK----KISQALKKASTF-----ERQKLVRRIKNCRASEDADTLGRFE 69
Query: 442 STCAFARVNLNPQLFNYCYSVALMHRRDTRKVRVKNFAEVFPSKFL-DSQVFTQAR 606
+ FA+ + +YCY ++ +D RK+ +N FP+ D+Q T AR
Sbjct: 70 AEFEFAKQFDFTKFVDYCYYKKILKNKDFRKLLNENLHVDFPADLTEDAQRNTVAR 125
>SPAP7G5.04c |lys1||aminoadipate-semialdehyde dehydrogenase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1419
Score = 26.2 bits (55), Expect = 5.5
Identities = 15/45 (33%), Positives = 22/45 (48%)
Frame = +1
Query: 169 KGENNSVFQLTEQFLTEDYANNGIELNNRFGDDASEKIPLKNLSK 303
KG++ S T TE Y N E+ ++ G+ E PL+ SK
Sbjct: 1131 KGKSLSFVSSTSTVDTEYYVNLSNEITSKGGNGIPESDPLQGSSK 1175
>SPAPB1A10.04c |cwp1||geranylgeranyltransferase I alpha subunit
Cwp1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 294
Score = 26.2 bits (55), Expect = 5.5
Identities = 24/84 (28%), Positives = 39/84 (46%)
Frame = +1
Query: 193 QLTEQFLTEDYANNGIELNNRFGDDASEKIPLKNLSKLPEFKIATQLPKDAEFSLFLPKH 372
+LT + L +D NN N+RF L SK+ + + +L + LF P +
Sbjct: 166 KLTNELLEKDIYNNSA-WNHRF-------YVLFETSKVVSWSLEEELNYLKDKILFAPDN 217
Query: 373 QEMANELLGVLMDVPENELQDLLS 444
Q N L GVL ++L +L++
Sbjct: 218 QSAWNYLCGVLDKSGPSKLDNLIA 241
>SPBC216.05 |rad3||ATR checkpoint kinase|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 2386
Score = 25.8 bits (54), Expect = 7.3
Identities = 23/101 (22%), Positives = 46/101 (45%), Gaps = 1/101 (0%)
Frame = +1
Query: 184 SVFQLTEQFLTEDYANNGIELNN-RFGDDASEKIPLKNLSKLPEFKIATQLPKDAEFSLF 360
S F++ EQ + I L R+ ++ L+ ++ K+ L ++E +LF
Sbjct: 357 SDFKVLEQLEPDSDLKKAIILFKCRYQSSEIDQTTLRAFGEICTGKLENTLFSNSELNLF 416
Query: 361 LPKHQEMANELLGVLMDVPENELQDLLSTCAFARVNLNPQL 483
L + + N+L +L + + Q+ + C FA+ +N L
Sbjct: 417 LLHYLSLDNDLSNIL----KVDFQNGHNICTFAKWCINNNL 453
>SPCC4B3.12 |set9||histone lysine methyltransferase
Set9|Schizosaccharomyces pombe|chr 3|||Manual
Length = 441
Score = 25.4 bits (53), Expect = 9.6
Identities = 10/23 (43%), Positives = 15/23 (65%)
Frame = +1
Query: 310 EFKIATQLPKDAEFSLFLPKHQE 378
E A+ D EFSLF+P+H++
Sbjct: 296 ELSDASSSDLDEEFSLFIPRHKK 318
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,240,965
Number of Sequences: 5004
Number of extensions: 66896
Number of successful extensions: 195
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 190
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 195
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 394431430
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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