Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P16_F_K04
         (514 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    23   1.2  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    23   2.1  
EF222295-1|ABN79655.1|  146|Tribolium castaneum arginine vasopre...    22   2.8  
AF254755-1|AAF70496.1|  505|Tribolium castaneum cytochrome P450 ...    22   3.7  
DQ414247-1|ABD63009.2|  414|Tribolium castaneum paired protein.        21   6.4  
DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase rever...    21   6.4  
EF117815-1|ABO38438.1|  535|Tribolium castaneum cryptochrome 2 p...    21   8.5  
AM712905-1|CAN84644.1|  102|Tribolium castaneum hypothetical pro...    21   8.5  

>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
           adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 23.4 bits (48), Expect = 1.2
 Identities = 13/44 (29%), Positives = 18/44 (40%)
 Frame = +2

Query: 302 TPKVVENSEGSRTTPSHVAFSKEGERLVGMPAKRQAVTNSGNTF 433
           T  VVE S     TP  +    +G  +  +P  RQ + N    F
Sbjct: 39  TGAVVECSAHGNPTPDIIWVRSDGTAVGDVPGLRQVLANGNLVF 82


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 22.6 bits (46), Expect = 2.1
 Identities = 13/39 (33%), Positives = 18/39 (46%)
 Frame = -2

Query: 372  PSFEKATWEGVVREPSLFSTTLGVLPSMTATHEFVVPRS 256
            PS E    E     PS+ S+T+   P  + T   V P+S
Sbjct: 1783 PSVEAVEEEREEAPPSVHSSTVVPPPQHSTTQSLVDPKS 1821


>EF222295-1|ABN79655.1|  146|Tribolium castaneum arginine
           vasopressin-like peptide protein.
          Length = 146

 Score = 22.2 bits (45), Expect = 2.8
 Identities = 7/15 (46%), Positives = 11/15 (73%)
 Frame = +3

Query: 384 SECPPNGKRSRIAVT 428
           + CP  GKRS+ A++
Sbjct: 24  TNCPRGGKRSKFAIS 38


>AF254755-1|AAF70496.1|  505|Tribolium castaneum cytochrome P450
           monooxigenase CYP4Q7 protein.
          Length = 505

 Score = 21.8 bits (44), Expect = 3.7
 Identities = 7/17 (41%), Positives = 13/17 (76%)
 Frame = -2

Query: 456 PINLFVA*NVLPLFVTA 406
           P+N  ++ N+LPL+ +A
Sbjct: 43  PVNDIISGNILPLYTSA 59


>DQ414247-1|ABD63009.2|  414|Tribolium castaneum paired protein.
          Length = 414

 Score = 21.0 bits (42), Expect = 6.4
 Identities = 9/20 (45%), Positives = 11/20 (55%)
 Frame = -1

Query: 382 QTLALFREGHMGGSRPRAFT 323
           Q     R G +GGS+PR  T
Sbjct: 95  QETGSIRPGVIGGSKPRVAT 114


>DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase reverse
           transcriptase protein.
          Length = 596

 Score = 21.0 bits (42), Expect = 6.4
 Identities = 7/23 (30%), Positives = 14/23 (60%)
 Frame = +3

Query: 318 KTVKALGRLPPMWPSRKRASVWS 386
           + V+ L +LPP +  R +  +W+
Sbjct: 399 RQVRTLYKLPPNYEIRHKFKLWN 421


>EF117815-1|ABO38438.1|  535|Tribolium castaneum cryptochrome 2
           protein.
          Length = 535

 Score = 20.6 bits (41), Expect = 8.5
 Identities = 6/7 (85%), Positives = 7/7 (100%)
 Frame = +3

Query: 336 GRLPPMW 356
           GRLPP+W
Sbjct: 218 GRLPPVW 224


>AM712905-1|CAN84644.1|  102|Tribolium castaneum hypothetical
           protein protein.
          Length = 102

 Score = 20.6 bits (41), Expect = 8.5
 Identities = 12/42 (28%), Positives = 18/42 (42%)
 Frame = +1

Query: 352 CGLLERGRASGRNARQTASGHE*R*HVLRDEEIDRTSIRRSR 477
           C  +  GR +G N  +  + H    H+L    +   S  RSR
Sbjct: 6   CIPISSGRTNGSNFSKFINCHYTSGHLLGSSSLPLRSFYRSR 47


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 117,826
Number of Sequences: 336
Number of extensions: 2588
Number of successful extensions: 8
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12258909
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)