Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P16_F_K04
(514 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_45647| Best HMM Match : HSP70 (HMM E-Value=0) 104 5e-23
SB_56180| Best HMM Match : No HMM Matches (HMM E-Value=.) 101 3e-22
SB_45540| Best HMM Match : HSP70 (HMM E-Value=0) 96 1e-20
SB_8490| Best HMM Match : HSP70 (HMM E-Value=0) 95 4e-20
SB_37014| Best HMM Match : HSP70 (HMM E-Value=5.9e-16) 58 6e-09
SB_51590| Best HMM Match : HSP70 (HMM E-Value=4.4e-36) 57 1e-08
SB_15336| Best HMM Match : No HMM Matches (HMM E-Value=.) 41 5e-04
SB_47391| Best HMM Match : HSP70 (HMM E-Value=2.7e-07) 32 0.24
SB_23902| Best HMM Match : Pkinase (HMM E-Value=2.29813e-43) 31 0.74
SB_18605| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 0.97
SB_56402| Best HMM Match : Extensin_2 (HMM E-Value=1.1) 29 2.2
SB_4326| Best HMM Match : V-set (HMM E-Value=0.036) 29 2.2
SB_42496| Best HMM Match : rve (HMM E-Value=0.02) 29 3.0
SB_42589| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 3.9
SB_11382| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 3.9
SB_39723| Best HMM Match : Homeobox (HMM E-Value=5.4e-32) 28 5.2
SB_17486| Best HMM Match : CheR (HMM E-Value=3.2) 28 5.2
SB_16839| Best HMM Match : zf-GRF (HMM E-Value=3.7e-15) 28 5.2
SB_14162| Best HMM Match : TonB_dep_Rec (HMM E-Value=3.7) 28 5.2
SB_29300| Best HMM Match : GFO_IDH_MocA (HMM E-Value=2.1e-17) 28 5.2
SB_23516| Best HMM Match : Glyco_tran_28_C (HMM E-Value=0.004) 28 5.2
SB_38937| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 6.9
SB_37484| Best HMM Match : DUF746 (HMM E-Value=4.1) 27 6.9
SB_34024| Best HMM Match : VLPT (HMM E-Value=3.7) 27 6.9
SB_45306| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 6.9
SB_18457| Best HMM Match : GPW_gp25 (HMM E-Value=2.7) 27 6.9
SB_43151| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.1
SB_14256| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.1
SB_11879| Best HMM Match : WD40 (HMM E-Value=5.8e-21) 27 9.1
SB_52619| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.1
SB_38463| Best HMM Match : Exo_endo_phos (HMM E-Value=4.1e-17) 27 9.1
SB_12797| Best HMM Match : HECT (HMM E-Value=0) 27 9.1
>SB_45647| Best HMM Match : HSP70 (HMM E-Value=0)
Length = 1327
Score = 104 bits (249), Expect = 5e-23
Identities = 49/92 (53%), Positives = 63/92 (68%)
Frame = +2
Query: 239 GAVIGIDLGTTNSCVAVMEGKTPKVVENSEGSRTTPSHVAFSKEGERLVGMPAKRQAVTN 418
G VIGIDLGTT SCV V + +++ N +G+R TPS+VAF++EGERL+G AK Q TN
Sbjct: 701 GTVIGIDLGTTYSCVGVFKNGRVEIIANDQGNRITPSYVAFTEEGERLIGDGAKNQLTTN 760
Query: 419 SGNTFYATKRLIGRRFDDPEVQKDMXNLSYKV 514
NT + KRLIGR +DD VQ D+ +KV
Sbjct: 761 PENTVFDAKRLIGRSWDDTSVQNDLKFFPFKV 792
>SB_56180| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 746
Score = 101 bits (242), Expect = 3e-22
Identities = 50/93 (53%), Positives = 64/93 (68%)
Frame = +2
Query: 236 RGAVIGIDLGTTNSCVAVMEGKTPKVVENSEGSRTTPSHVAFSKEGERLVGMPAKRQAVT 415
+ IGIDLGTT SCV V + +++ N +G+RTTPS+VAF+ E ERLVG AK Q
Sbjct: 3 KAPAIGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDE-ERLVGDAAKNQVAM 61
Query: 416 NSGNTFYATKRLIGRRFDDPEVQKDMXNLSYKV 514
N NT + KRLIGRRFDDP V+ DM + S++V
Sbjct: 62 NPTNTIFDAKRLIGRRFDDPGVKDDMKHWSFEV 94
>SB_45540| Best HMM Match : HSP70 (HMM E-Value=0)
Length = 1097
Score = 96.3 bits (229), Expect = 1e-20
Identities = 46/89 (51%), Positives = 61/89 (68%)
Frame = +2
Query: 248 IGIDLGTTNSCVAVMEGKTPKVVENSEGSRTTPSHVAFSKEGERLVGMPAKRQAVTNSGN 427
+GIDLGTT SCV V + +++ N +G+RTTPS+VAFS + ERL+G AK Q N N
Sbjct: 7 VGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFS-DTERLIGDAAKNQVAMNPEN 65
Query: 428 TFYATKRLIGRRFDDPEVQKDMXNLSYKV 514
T + KRLIGR+FDDP V +DM + + V
Sbjct: 66 TVFDAKRLIGRKFDDPVVARDMTHWPFHV 94
>SB_8490| Best HMM Match : HSP70 (HMM E-Value=0)
Length = 640
Score = 94.7 bits (225), Expect = 4e-20
Identities = 46/93 (49%), Positives = 60/93 (64%)
Frame = +2
Query: 236 RGAVIGIDLGTTNSCVAVMEGKTPKVVENSEGSRTTPSHVAFSKEGERLVGMPAKRQAVT 415
+ IGIDLGTT SCV V + +++ N +G+RTTPS+V F+ + ERLVG AK Q
Sbjct: 3 KAPAIGIDLGTTYSCVGVFQNGKVEIIANDQGNRTTPSYVGFT-DTERLVGDAAKNQVAL 61
Query: 416 NSGNTFYATKRLIGRRFDDPEVQKDMXNLSYKV 514
N NT + KRLIGRR+DD VQ DM +K+
Sbjct: 62 NPENTIFDAKRLIGRRYDDATVQSDMKLWPFKI 94
>SB_37014| Best HMM Match : HSP70 (HMM E-Value=5.9e-16)
Length = 212
Score = 57.6 bits (133), Expect = 6e-09
Identities = 28/45 (62%), Positives = 33/45 (73%)
Frame = +2
Query: 290 MEGKTPKVVENSEGSRTTPSHVAFSKEGERLVGMPAKRQAVTNSG 424
M+GKTPKV+EN+EGSRTTPS VAF+ EGERL + V SG
Sbjct: 1 MDGKTPKVIENAEGSRTTPSVVAFTPEGERLTDINLPYITVDASG 45
>SB_51590| Best HMM Match : HSP70 (HMM E-Value=4.4e-36)
Length = 437
Score = 56.8 bits (131), Expect = 1e-08
Identities = 33/81 (40%), Positives = 44/81 (54%), Gaps = 2/81 (2%)
Frame = +2
Query: 245 VIGIDLGTTNSCVAVMEGKTPKV--VENSEGSRTTPSHVAFSKEGERLVGMPAKRQAVTN 418
+IGIDLGTT SCV + + ++ + + PS VAF+ +G LVG A QA N
Sbjct: 33 IIGIDLGTTYSCVGAYQAISGRIDIFSDENDDKVVPSLVAFTDKGV-LVGEKALSQAEIN 91
Query: 419 SGNTFYATKRLIGRRFDDPEV 481
NT Y KR IG+ F E+
Sbjct: 92 PKNTIYDAKRFIGKTFTKQEL 112
>SB_15336| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1068
Score = 41.1 bits (92), Expect = 5e-04
Identities = 18/35 (51%), Positives = 24/35 (68%)
Frame = +2
Query: 410 VTNSGNTFYATKRLIGRRFDDPEVQKDMXNLSYKV 514
++N NT KR IGR+F DP VQK++ +L YKV
Sbjct: 116 ISNLKNTISQFKRFIGRKFSDPAVQKEIPHLPYKV 150
Score = 36.7 bits (81), Expect = 0.011
Identities = 19/55 (34%), Positives = 29/55 (52%)
Frame = +2
Query: 242 AVIGIDLGTTNSCVAVMEGKTPKVVENSEGSRTTPSHVAFSKEGERLVGMPAKRQ 406
+V+G D+G + +AV G + V N R TPS V+ + +RL+G K Q
Sbjct: 2 SVVGFDVGNQSCYIAVARGGGIETVANEFSDRCTPSFVSLG-DKQRLIGTSGKNQ 55
>SB_47391| Best HMM Match : HSP70 (HMM E-Value=2.7e-07)
Length = 592
Score = 32.3 bits (70), Expect = 0.24
Identities = 26/83 (31%), Positives = 42/83 (50%), Gaps = 3/83 (3%)
Frame = +2
Query: 215 RNKSEGVRGAVIGIDLGTTNSCVAVMEGKTPKVVENSEGSRTTPSHVAFSKEGERLV--- 385
RN R A++ GT + V++G T ++ N G R TP+ VAFS + E+L+
Sbjct: 56 RNPICKAREAILIARAGTFRTRWPVLDGNTT-IIANDAGDRVTPAMVAFS-DTEKLIDKD 113
Query: 386 GMPAKRQAVTNSGNTFYATKRLI 454
G+P + +N N + K +I
Sbjct: 114 GLP-YYEVESNERNIQVSPKEVI 135
>SB_23902| Best HMM Match : Pkinase (HMM E-Value=2.29813e-43)
Length = 1602
Score = 30.7 bits (66), Expect = 0.74
Identities = 14/46 (30%), Positives = 24/46 (52%)
Frame = +3
Query: 207 YNLETSLRVFVEPSLESIWARQTRALPSWRARHPRWWKTVKALGRL 344
Y L ++ V+PS+E +W + L +R HP +W + + RL
Sbjct: 433 YQLPYFDKICVDPSIEEVW--KVVCLEKYRPSHPNYWLQDQYIERL 476
>SB_18605| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1400
Score = 30.3 bits (65), Expect = 0.97
Identities = 14/40 (35%), Positives = 24/40 (60%), Gaps = 5/40 (12%)
Frame = +3
Query: 234 FVEPSLESIWARQTRAL-----PSWRARHPRWWKTVKALG 338
++ P ++S+ AR+ RAL P + R +WWK + +LG
Sbjct: 937 WITPRIKSLVARRQRALSRYVKPLKQTRVDKWWKNINSLG 976
>SB_56402| Best HMM Match : Extensin_2 (HMM E-Value=1.1)
Length = 352
Score = 29.1 bits (62), Expect = 2.2
Identities = 14/37 (37%), Positives = 19/37 (51%)
Frame = -2
Query: 387 PTRRSPSFEKATWEGVVREPSLFSTTLGVLPSMTATH 277
PT +PS E W V P+L++ T G L T T+
Sbjct: 164 PTYGTPSMEPHVWNPNVWNPNLWNLTYGTLSIETPTY 200
>SB_4326| Best HMM Match : V-set (HMM E-Value=0.036)
Length = 156
Score = 29.1 bits (62), Expect = 2.2
Identities = 16/41 (39%), Positives = 20/41 (48%), Gaps = 3/41 (7%)
Frame = -2
Query: 372 PSFEKATWEGVVREPSLFSTT---LGVLPSMTATHEFVVPR 259
P+ K TW+ VRE +TT G PS A H F P+
Sbjct: 95 PAITKKTWQLSVRETGAVNTTYFPAGERPSKIADHSFSSPK 135
>SB_42496| Best HMM Match : rve (HMM E-Value=0.02)
Length = 371
Score = 28.7 bits (61), Expect = 3.0
Identities = 14/44 (31%), Positives = 20/44 (45%), Gaps = 1/44 (2%)
Frame = +3
Query: 243 PSLESIWARQTRALPSWRARHPR-WWKTVKALGRLPPMWPSRKR 371
P ++++ TR + S WWK K L P WPS+ R
Sbjct: 51 PGVDNLADLLTRGMSSSSLTESELWWKGPKLLSASPASWPSQTR 94
>SB_42589| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 183
Score = 28.3 bits (60), Expect = 3.9
Identities = 16/39 (41%), Positives = 18/39 (46%), Gaps = 3/39 (7%)
Frame = -3
Query: 398 WRAFRPDARPLSRR---PHGRESSESLHCFPPPWVSCPP 291
W A PD S R P G+ SE+L PP SC P
Sbjct: 27 WTAPDPDIPVYSARARSPRGQRQSENLRTIPPVSNSCSP 65
>SB_11382| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 143
Score = 28.3 bits (60), Expect = 3.9
Identities = 29/81 (35%), Positives = 37/81 (45%), Gaps = 5/81 (6%)
Frame = +3
Query: 186 LFTSDMAYNLETSLRVFVEPSLESIWARQTRALPSWRARHPRWWKT--VKALGRL---PP 350
LF +DM NLE +LR+F +P LES + AL R R W+ V L RL PP
Sbjct: 31 LFINDMQENLECTLRLFGDP-LESTCRHASLALAVVLQR--RDWENPGVTQLNRLAAHPP 87
Query: 351 MWPSRKRASVWSECPPNGKRS 413
R ++ P RS
Sbjct: 88 FASWRNSEEARTDRPSQQLRS 108
>SB_39723| Best HMM Match : Homeobox (HMM E-Value=5.4e-32)
Length = 257
Score = 27.9 bits (59), Expect = 5.2
Identities = 17/55 (30%), Positives = 22/55 (40%), Gaps = 8/55 (14%)
Frame = -3
Query: 356 PHGRESSESL---HCFPPPWVSC-----PP*RQRTSLSCPDRFQ*RLHEHPQTCF 216
PH S E H +P PW+ C PP + LS + H P+T F
Sbjct: 59 PHSMSSCEHCDEHHVYPSPWIQCGQHFMPPGCSQHYLSARNMIVSGRHRRPRTAF 113
>SB_17486| Best HMM Match : CheR (HMM E-Value=3.2)
Length = 1177
Score = 27.9 bits (59), Expect = 5.2
Identities = 22/81 (27%), Positives = 39/81 (48%), Gaps = 2/81 (2%)
Frame = +2
Query: 188 IYQRHGVQFRNKSEGVR--GAVIGIDLGTTNSCVAVMEGKTPKVVENSEGSRTTPSHVAF 361
+Y+ V R SE ++ GA+ + G + +C G+ + +E +EGS TTP
Sbjct: 547 VYRIADVAGRPLSEVLQLTGAIQLTEWGFSEACHPYTSGRVGQHLEQNEGSITTPELKDL 606
Query: 362 SKEGERLVGMPAKRQAVTNSG 424
G+ + M A R+ + + G
Sbjct: 607 LDSGD--LAMAAAREVLFSVG 625
>SB_16839| Best HMM Match : zf-GRF (HMM E-Value=3.7e-15)
Length = 333
Score = 27.9 bits (59), Expect = 5.2
Identities = 17/54 (31%), Positives = 23/54 (42%)
Frame = +2
Query: 278 CVAVMEGKTPKVVENSEGSRTTPSHVAFSKEGERLVGMPAKRQAVTNSGNTFYA 439
CV +TP +V + G TTP + +RL M + N G FYA
Sbjct: 219 CVTPGASRTPTLVPSINGGNTTPPLCDCGRRAKRLTVM----KPGPNQGRVFYA 268
>SB_14162| Best HMM Match : TonB_dep_Rec (HMM E-Value=3.7)
Length = 412
Score = 27.9 bits (59), Expect = 5.2
Identities = 20/65 (30%), Positives = 28/65 (43%), Gaps = 1/65 (1%)
Frame = -2
Query: 408 ACRLAGIP-TRRSPSFEKATWEGVVREPSLFSTTLGVLPSMTATHEFVVPRSIPMTAPRT 232
+ L+ IP R S + ATW + TLG+L +T HE + M A +
Sbjct: 219 SAELSFIPYVRHSTNDYIATWNSYTPKAESSVDTLGLLSKLTLQHENGSETVVGMDAEYS 278
Query: 231 PSDLF 217
SD F
Sbjct: 279 QSDSF 283
>SB_29300| Best HMM Match : GFO_IDH_MocA (HMM E-Value=2.1e-17)
Length = 634
Score = 27.9 bits (59), Expect = 5.2
Identities = 11/26 (42%), Positives = 18/26 (69%)
Frame = +3
Query: 300 RHPRWWKTVKALGRLPPMWPSRKRAS 377
+ P +++ ALG +PP+WP+ RAS
Sbjct: 557 KSPAAIQSLIALGAVPPVWPNGHRAS 582
>SB_23516| Best HMM Match : Glyco_tran_28_C (HMM E-Value=0.004)
Length = 969
Score = 27.9 bits (59), Expect = 5.2
Identities = 21/58 (36%), Positives = 26/58 (44%), Gaps = 4/58 (6%)
Frame = -1
Query: 439 RVKRVTAIRDRLPFGGHSDQTLALFREGHMGGSRPRAFTV----FHHLGCLALHDGNA 278
RV RV R R P +D + GHMG RP F++ + L LAL G A
Sbjct: 209 RVSRVMRKRPRAPVVEAADLVEYVQALGHMGHLRPHGFSLPFYQLYMLDVLALRKGAA 266
>SB_38937| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2085
Score = 27.5 bits (58), Expect = 6.9
Identities = 13/32 (40%), Positives = 16/32 (50%)
Frame = -2
Query: 336 REPSLFSTTLGVLPSMTATHEFVVPRSIPMTA 241
R PS F L LP+ AT E +P + M A
Sbjct: 551 RSPSFFPIALSPLPTPLATEESDLPSDVTMAA 582
>SB_37484| Best HMM Match : DUF746 (HMM E-Value=4.1)
Length = 465
Score = 27.5 bits (58), Expect = 6.9
Identities = 10/20 (50%), Positives = 11/20 (55%)
Frame = +3
Query: 312 WWKTVKALGRLPPMWPSRKR 371
WWK K L P WPS+ R
Sbjct: 335 WWKGPKWLSASPASWPSQTR 354
>SB_34024| Best HMM Match : VLPT (HMM E-Value=3.7)
Length = 368
Score = 27.5 bits (58), Expect = 6.9
Identities = 14/49 (28%), Positives = 24/49 (48%)
Frame = +2
Query: 191 YQRHGVQFRNKSEGVRGAVIGIDLGTTNSCVAVMEGKTPKVVENSEGSR 337
YQ G++ EG+R A + + TT A+ + PK + +E S+
Sbjct: 4 YQNKGLRTAEHPEGLRAAELPKGIRTTEHPKALRTAELPKGIRTTEHSK 52
>SB_45306| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1576
Score = 27.5 bits (58), Expect = 6.9
Identities = 11/35 (31%), Positives = 20/35 (57%)
Frame = -2
Query: 399 LAGIPTRRSPSFEKATWEGVVREPSLFSTTLGVLP 295
LAGIPT +P+F++A ++ + G++P
Sbjct: 227 LAGIPTHNTPTFKQAAKAPLINTLGINPQAKGIIP 261
>SB_18457| Best HMM Match : GPW_gp25 (HMM E-Value=2.7)
Length = 577
Score = 27.5 bits (58), Expect = 6.9
Identities = 20/64 (31%), Positives = 29/64 (45%), Gaps = 3/64 (4%)
Frame = +2
Query: 281 VAVMEGKTPKVVENSEGSR---TTPSHVAFSKEGERLVGMPAKRQAVTNSGNTFYATKRL 451
V+ GK+P V N +GSR + +A S + + G + S N F T RL
Sbjct: 435 VSAQSGKSPAVNLNFQGSRIFQVSYKSLASSDDVKSAAGEGTAEISPQESTNRFRFTGRL 494
Query: 452 IGRR 463
+G R
Sbjct: 495 LGNR 498
>SB_43151| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1719
Score = 27.1 bits (57), Expect = 9.1
Identities = 18/58 (31%), Positives = 27/58 (46%)
Frame = +2
Query: 311 VVENSEGSRTTPSHVAFSKEGERLVGMPAKRQAVTNSGNTFYATKRLIGRRFDDPEVQ 484
V N +G + + + E ERL G P+ V N G T +RL+G + P V+
Sbjct: 1652 VAVNDDGGQERED-ILWCTEMERLFGFPSHYTDVNNMGRT--QRQRLLGNAWSVPVVR 1706
>SB_14256| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3176
Score = 27.1 bits (57), Expect = 9.1
Identities = 14/31 (45%), Positives = 17/31 (54%)
Frame = +2
Query: 320 NSEGSRTTPSHVAFSKEGERLVGMPAKRQAV 412
+SEGSR TPS V +S E P+ Q V
Sbjct: 854 HSEGSRRTPSGVPYSSGSEGTSSNPSDAQDV 884
>SB_11879| Best HMM Match : WD40 (HMM E-Value=5.8e-21)
Length = 447
Score = 27.1 bits (57), Expect = 9.1
Identities = 18/86 (20%), Positives = 37/86 (43%), Gaps = 3/86 (3%)
Frame = +2
Query: 155 ILKSNATPTVPIYQRHGVQFRNKSEGVRGAVIGIDLGTT---NSCVAVMEGKTPKVVENS 325
+L++ P HG + + G+++ T ++CV + + K V +
Sbjct: 186 LLQNTLWPEAQKLYGHGYEIFCVASSPDGSLLATSCKATKPEHACVILWDANIWKQVCSL 245
Query: 326 EGSRTTPSHVAFSKEGERLVGMPAKR 403
G T + +AFS G+R++ + R
Sbjct: 246 PGHSLTVTQIAFSHSGQRILSVSRDR 271
>SB_52619| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 492
Score = 27.1 bits (57), Expect = 9.1
Identities = 11/34 (32%), Positives = 19/34 (55%)
Frame = +3
Query: 162 KATQHPQFLFTSDMAYNLETSLRVFVEPSLESIW 263
+AT F T YNL +S+ ++PS +S++
Sbjct: 412 QATYIANFFVTRSSQYNLRSSVHNLIQPSYQSLY 445
>SB_38463| Best HMM Match : Exo_endo_phos (HMM E-Value=4.1e-17)
Length = 828
Score = 27.1 bits (57), Expect = 9.1
Identities = 18/62 (29%), Positives = 25/62 (40%)
Frame = +2
Query: 191 YQRHGVQFRNKSEGVRGAVIGIDLGTTNSCVAVMEGKTPKVVENSEGSRTTPSHVAFSKE 370
Y HG +K + G + TTN +A TPK+V+N+ AF K
Sbjct: 106 YLLHGATKEHKQPALGGLWCSLVKNTTNDEMANYIAHTPKIVKNAIPLLIKQKVKAFKKS 165
Query: 371 GE 376
E
Sbjct: 166 EE 167
>SB_12797| Best HMM Match : HECT (HMM E-Value=0)
Length = 749
Score = 27.1 bits (57), Expect = 9.1
Identities = 17/55 (30%), Positives = 25/55 (45%)
Frame = -1
Query: 472 IVESTSDQSLRRVKRVTAIRDRLPFGGHSDQTLALFREGHMGGSRPRAFTVFHHL 308
IV S + R++ T DR+P GG + L + + G P A T F+ L
Sbjct: 667 IVHSFDMEQKRQLLMFTTGSDRIPVGGLAKLKLIIAKNGPDSPRLPTAHTCFNVL 721
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,594,961
Number of Sequences: 59808
Number of extensions: 358369
Number of successful extensions: 1142
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 1061
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1137
length of database: 16,821,457
effective HSP length: 77
effective length of database: 12,216,241
effective search space used: 1136110413
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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