Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P16_F_K04
(514 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X07678-1|CAA30525.1| 487|Caenorhabditis elegans hsp6F protein. 157 6e-39
U88315-3|AAB42371.1| 657|Caenorhabditis elegans Heat shock prot... 157 6e-39
Z80223-1|CAB02319.1| 640|Caenorhabditis elegans Hypothetical pr... 99 2e-21
M18540-1|AAA28078.1| 640|Caenorhabditis elegans protein ( C.ele... 99 2e-21
U56965-1|AAB52671.1| 661|Caenorhabditis elegans Heat shock prot... 95 3e-20
Z81467-1|CAB03871.1| 643|Caenorhabditis elegans Hypothetical pr... 94 6e-20
AF000264-1|AAC71123.1| 657|Caenorhabditis elegans Heat shock pr... 94 6e-20
Z83108-5|CAB05508.1| 645|Caenorhabditis elegans Hypothetical pr... 93 1e-19
Z83108-4|CAB05507.1| 645|Caenorhabditis elegans Hypothetical pr... 93 1e-19
M26604-1|AAA28074.1| 661|Caenorhabditis elegans protein ( C. el... 92 2e-19
Z81113-10|CAB54300.1| 607|Caenorhabditis elegans Hypothetical p... 81 3e-16
Z81059-7|CAB54217.1| 607|Caenorhabditis elegans Hypothetical pr... 81 3e-16
L09634-1|AAA27967.1| 776|Caenorhabditis elegans Hypothetical pr... 55 3e-08
Z49967-2|CAA90248.2| 450|Caenorhabditis elegans Hypothetical pr... 54 8e-08
Z81077-17|CAB82212.1| 2944|Caenorhabditis elegans Hypothetical p... 29 2.0
Z75952-7|CAB82204.1| 2944|Caenorhabditis elegans Hypothetical pr... 29 2.0
U67951-2|AAB07570.2| 302|Caenorhabditis elegans Regulator of fu... 28 3.4
U67951-1|AAQ65207.1| 315|Caenorhabditis elegans Regulator of fu... 28 3.4
U12965-3|AAZ32811.1| 980|Caenorhabditis elegans Hypothetical pr... 28 3.4
AY115477-1|AAM55473.1| 303|Caenorhabditis elegans zinc finger p... 28 3.4
U80451-1|AAB37835.1| 591|Caenorhabditis elegans Dnaj domain (pr... 27 6.0
U51993-3|AAB36853.2| 958|Caenorhabditis elegans Hypothetical pr... 27 6.0
>X07678-1|CAA30525.1| 487|Caenorhabditis elegans hsp6F protein.
Length = 487
Score = 157 bits (380), Expect = 6e-39
Identities = 72/100 (72%), Positives = 87/100 (87%)
Frame = +2
Query: 215 RNKSEGVRGAVIGIDLGTTNSCVAVMEGKTPKVVENSEGSRTTPSHVAFSKEGERLVGMP 394
R+ S+ +G VIGIDLGTTNSCV++MEGKTPKV+EN+EG RTTPS VAF+ +GERLVG P
Sbjct: 23 RSLSDKPKGHVIGIDLGTTNSCVSIMEGKTPKVIENAEGVRTTPSTVAFTADGERLVGAP 82
Query: 395 AKRQAVTNSGNTFYATKRLIGRRFDDPEVQKDMXNLSYKV 514
AKRQAVTNS NT +ATKRLIGRR++DPEVQKD+ + YK+
Sbjct: 83 AKRQAVTNSANTLFATKRLIGRRYEDPEVQKDLKVVPYKI 122
>U88315-3|AAB42371.1| 657|Caenorhabditis elegans Heat shock protein
protein 6 protein.
Length = 657
Score = 157 bits (380), Expect = 6e-39
Identities = 72/100 (72%), Positives = 87/100 (87%)
Frame = +2
Query: 215 RNKSEGVRGAVIGIDLGTTNSCVAVMEGKTPKVVENSEGSRTTPSHVAFSKEGERLVGMP 394
R+ S+ +G VIGIDLGTTNSCV++MEGKTPKV+EN+EG RTTPS VAF+ +GERLVG P
Sbjct: 23 RSLSDKPKGHVIGIDLGTTNSCVSIMEGKTPKVIENAEGVRTTPSTVAFTADGERLVGAP 82
Query: 395 AKRQAVTNSGNTFYATKRLIGRRFDDPEVQKDMXNLSYKV 514
AKRQAVTNS NT +ATKRLIGRR++DPEVQKD+ + YK+
Sbjct: 83 AKRQAVTNSANTLFATKRLIGRRYEDPEVQKDLKVVPYKI 122
>Z80223-1|CAB02319.1| 640|Caenorhabditis elegans Hypothetical
protein F26D10.3 protein.
Length = 640
Score = 98.7 bits (235), Expect = 2e-21
Identities = 50/90 (55%), Positives = 64/90 (71%), Gaps = 1/90 (1%)
Frame = +2
Query: 248 IGIDLGTTNSCVAV-MEGKTPKVVENSEGSRTTPSHVAFSKEGERLVGMPAKRQAVTNSG 424
+GIDLGTT SCV V M GK +++ N +G+RTTPS+VAF+ + ERL+G AK Q N
Sbjct: 7 VGIDLGTTYSCVGVFMHGKV-EIIANDQGNRTTPSYVAFT-DTERLIGDAAKNQVAMNPH 64
Query: 425 NTFYATKRLIGRRFDDPEVQKDMXNLSYKV 514
NT + KRLIGR+FDDP VQ DM + +KV
Sbjct: 65 NTVFDAKRLIGRKFDDPAVQSDMKHWPFKV 94
>M18540-1|AAA28078.1| 640|Caenorhabditis elegans protein (
C.elegans heat shockprotein 70A gene, complete cds. ).
Length = 640
Score = 98.7 bits (235), Expect = 2e-21
Identities = 50/90 (55%), Positives = 64/90 (71%), Gaps = 1/90 (1%)
Frame = +2
Query: 248 IGIDLGTTNSCVAV-MEGKTPKVVENSEGSRTTPSHVAFSKEGERLVGMPAKRQAVTNSG 424
+GIDLGTT SCV V M GK +++ N +G+RTTPS+VAF+ + ERL+G AK Q N
Sbjct: 7 VGIDLGTTYSCVGVFMHGKV-EIIANDQGNRTTPSYVAFT-DTERLIGDAAKNQVAMNPH 64
Query: 425 NTFYATKRLIGRRFDDPEVQKDMXNLSYKV 514
NT + KRLIGR+FDDP VQ DM + +KV
Sbjct: 65 NTVFDAKRLIGRKFDDPAVQSDMKHWPFKV 94
>U56965-1|AAB52671.1| 661|Caenorhabditis elegans Heat shock protein
protein 3 protein.
Length = 661
Score = 95.1 bits (226), Expect = 3e-20
Identities = 47/99 (47%), Positives = 64/99 (64%), Gaps = 1/99 (1%)
Frame = +2
Query: 221 KSEGVRGAVIGIDLGTTNSCVAVMEGKTPKVVENSEGSRTTPSHVAFS-KEGERLVGMPA 397
K E G +IGIDLGTT SCV V + +++ N +G+R TPS+VAFS +G+RL+G A
Sbjct: 27 KKETKYGTIIGIDLGTTYSCVGVYKNGRVEIIANDQGNRITPSYVAFSGDQGDRLIGDAA 86
Query: 398 KRQAVTNSGNTFYATKRLIGRRFDDPEVQKDMXNLSYKV 514
K Q N NT + KRLIGR ++D VQ D+ + +KV
Sbjct: 87 KNQLTINPENTIFDAKRLIGRDYNDKTVQADIKHWPFKV 125
>Z81467-1|CAB03871.1| 643|Caenorhabditis elegans Hypothetical
protein C12C8.1 protein.
Length = 643
Score = 93.9 bits (223), Expect = 6e-20
Identities = 47/89 (52%), Positives = 62/89 (69%)
Frame = +2
Query: 248 IGIDLGTTNSCVAVMEGKTPKVVENSEGSRTTPSHVAFSKEGERLVGMPAKRQAVTNSGN 427
IGIDLGTT SCV + + +++ NSEG++TTPS+VAF+ + ERLVG AK QA N N
Sbjct: 7 IGIDLGTTYSCVGIYQNGKVEILANSEGNKTTPSYVAFT-DTERLVGDAAKDQAARNPEN 65
Query: 428 TFYATKRLIGRRFDDPEVQKDMXNLSYKV 514
T + KRLIGRRFD+ VQ D+ + + V
Sbjct: 66 TVFDAKRLIGRRFDEETVQSDIKHWPFTV 94
>AF000264-1|AAC71123.1| 657|Caenorhabditis elegans Heat shock
protein protein 4 protein.
Length = 657
Score = 93.9 bits (223), Expect = 6e-20
Identities = 45/99 (45%), Positives = 65/99 (65%), Gaps = 1/99 (1%)
Frame = +2
Query: 221 KSEGVRGAVIGIDLGTTNSCVAVMEGKTPKVVENSEGSRTTPSHVAFS-KEGERLVGMPA 397
+ E G +IGIDLGTT SCV V + +++ N +G+R TPS+VAFS +GERL+G A
Sbjct: 24 EKEEKMGTIIGIDLGTTYSCVGVFKNGRVEIIANDQGNRITPSYVAFSGDQGERLIGDAA 83
Query: 398 KRQAVTNSGNTFYATKRLIGRRFDDPEVQKDMXNLSYKV 514
K Q N NT + KRLIGR +++ VQ+D+ + +K+
Sbjct: 84 KNQLTINPENTIFDAKRLIGRFYNEKTVQQDIKHWPFKI 122
>Z83108-5|CAB05508.1| 645|Caenorhabditis elegans Hypothetical
protein F44E5.5 protein.
Length = 645
Score = 92.7 bits (220), Expect = 1e-19
Identities = 47/89 (52%), Positives = 61/89 (68%)
Frame = +2
Query: 248 IGIDLGTTNSCVAVMEGKTPKVVENSEGSRTTPSHVAFSKEGERLVGMPAKRQAVTNSGN 427
IGIDLGTT SCV + + +++ NSEG++TTPS+VAF+ + ERLVG AK QA N N
Sbjct: 7 IGIDLGTTYSCVGIYQNGKVEILANSEGNKTTPSYVAFT-DTERLVGDAAKDQAARNPEN 65
Query: 428 TFYATKRLIGRRFDDPEVQKDMXNLSYKV 514
T + KRLIGRRFD+ VQ D + + V
Sbjct: 66 TVFDAKRLIGRRFDESTVQSDCKHWPFGV 94
>Z83108-4|CAB05507.1| 645|Caenorhabditis elegans Hypothetical
protein F44E5.4 protein.
Length = 645
Score = 92.7 bits (220), Expect = 1e-19
Identities = 47/89 (52%), Positives = 61/89 (68%)
Frame = +2
Query: 248 IGIDLGTTNSCVAVMEGKTPKVVENSEGSRTTPSHVAFSKEGERLVGMPAKRQAVTNSGN 427
IGIDLGTT SCV + + +++ NSEG++TTPS+VAF+ + ERLVG AK QA N N
Sbjct: 7 IGIDLGTTYSCVGIYQNGKVEILANSEGNKTTPSYVAFT-DTERLVGDAAKDQAARNPEN 65
Query: 428 TFYATKRLIGRRFDDPEVQKDMXNLSYKV 514
T + KRLIGRRFD+ VQ D + + V
Sbjct: 66 TVFDAKRLIGRRFDESTVQSDCKHWPFGV 94
>M26604-1|AAA28074.1| 661|Caenorhabditis elegans protein ( C.
elegans BiP (hsp3)gene, complete cds. ).
Length = 661
Score = 91.9 bits (218), Expect = 2e-19
Identities = 46/99 (46%), Positives = 63/99 (63%), Gaps = 1/99 (1%)
Frame = +2
Query: 221 KSEGVRGAVIGIDLGTTNSCVAVMEGKTPKVVENSEGSRTTPSHVAFS-KEGERLVGMPA 397
K E +IGIDLGTT SCV V + +++ N +G+R TPS+VAFS +G+RL+G A
Sbjct: 27 KKETKYETIIGIDLGTTYSCVGVYKNGRVEIIANDQGNRITPSYVAFSGDQGDRLIGDAA 86
Query: 398 KRQAVTNSGNTFYATKRLIGRRFDDPEVQKDMXNLSYKV 514
K Q N NT + KRLIGR ++D VQ D+ + +KV
Sbjct: 87 KNQLTINPENTIFDAKRLIGRDYNDKTVQADIKHWPFKV 125
>Z81113-10|CAB54300.1| 607|Caenorhabditis elegans Hypothetical
protein F11F1.1 protein.
Length = 607
Score = 81.4 bits (192), Expect = 3e-16
Identities = 40/89 (44%), Positives = 57/89 (64%)
Frame = +2
Query: 248 IGIDLGTTNSCVAVMEGKTPKVVENSEGSRTTPSHVAFSKEGERLVGMPAKRQAVTNSGN 427
IGIDLGTT SCVA + ++EN G RTTPS +A ++G+ L+G AK + + N
Sbjct: 3 IGIDLGTTFSCVAYYQNGQVNILENENGCRTTPSVLAVGEDGDLLIGQHAK-DVIGKATN 61
Query: 428 TFYATKRLIGRRFDDPEVQKDMXNLSYKV 514
+ + KR+IGRR+DD +Q+DM +KV
Sbjct: 62 SLFDVKRIIGRRYDDVLLQRDMPLWPFKV 90
>Z81059-7|CAB54217.1| 607|Caenorhabditis elegans Hypothetical
protein F11F1.1 protein.
Length = 607
Score = 81.4 bits (192), Expect = 3e-16
Identities = 40/89 (44%), Positives = 57/89 (64%)
Frame = +2
Query: 248 IGIDLGTTNSCVAVMEGKTPKVVENSEGSRTTPSHVAFSKEGERLVGMPAKRQAVTNSGN 427
IGIDLGTT SCVA + ++EN G RTTPS +A ++G+ L+G AK + + N
Sbjct: 3 IGIDLGTTFSCVAYYQNGQVNILENENGCRTTPSVLAVGEDGDLLIGQHAK-DVIGKATN 61
Query: 428 TFYATKRLIGRRFDDPEVQKDMXNLSYKV 514
+ + KR+IGRR+DD +Q+DM +KV
Sbjct: 62 SLFDVKRIIGRRYDDVLLQRDMPLWPFKV 90
>L09634-1|AAA27967.1| 776|Caenorhabditis elegans Hypothetical
protein C30C11.4 protein.
Length = 776
Score = 55.2 bits (127), Expect = 3e-08
Identities = 30/91 (32%), Positives = 48/91 (52%)
Frame = +2
Query: 242 AVIGIDLGTTNSCVAVMEGKTPKVVENSEGSRTTPSHVAFSKEGERLVGMPAKRQAVTNS 421
+V+G D+G N + V +V+ N TP+ V+F + +R +G+ A++ TN
Sbjct: 2 SVLGFDIGNLNCYIGVARQGGIEVITNDYSLHATPACVSFGPK-DRSMGVAARQAVTTNI 60
Query: 422 GNTFYATKRLIGRRFDDPEVQKDMXNLSYKV 514
NT K LIGR+F DP Q+ + + KV
Sbjct: 61 KNTVINFKHLIGRKFSDPVAQRFIPFIPCKV 91
>Z49967-2|CAA90248.2| 450|Caenorhabditis elegans Hypothetical
protein F54C9.2 protein.
Length = 450
Score = 53.6 bits (123), Expect = 8e-08
Identities = 29/77 (37%), Positives = 40/77 (51%), Gaps = 2/77 (2%)
Frame = +2
Query: 245 VIGIDLGTTNSCVAVMEGKTPK--VVENSEGSRTTPSHVAFSKEGERLVGMPAKRQAVTN 418
+ GIDLGTT S + + T + ++ + G ++ PS VAF G L+G A Q N
Sbjct: 35 IAGIDLGTTYSSIGIYHAVTGETIILPDDLGKKSVPSVVAFLPNGTVLIGTRATEQQEHN 94
Query: 419 SGNTFYATKRLIGRRFD 469
T Y KR IGR F+
Sbjct: 95 PKRTIYDAKRFIGRNFE 111
>Z81077-17|CAB82212.1| 2944|Caenorhabditis elegans Hypothetical
protein F36A2.13 protein.
Length = 2944
Score = 29.1 bits (62), Expect = 2.0
Identities = 20/79 (25%), Positives = 29/79 (36%), Gaps = 6/79 (7%)
Frame = +3
Query: 165 ATQHPQFLFTSDMAYNLETSLRVFV------EPSLESIWARQTRALPSWRARHPRWWKTV 326
AT H +F + Y+ E + F+ P + S T+ LP R R
Sbjct: 572 ATDHCRFRSMTPKEYDYELEVDGFIALLNGASPEVSSASGTSTKTLPGGRVSRKRTHDEA 631
Query: 327 KALGRLPPMWPSRKRASVW 383
+PP R+R VW
Sbjct: 632 DDSNSVPPTEFGRRRVEVW 650
>Z75952-7|CAB82204.1| 2944|Caenorhabditis elegans Hypothetical
protein F36A2.13 protein.
Length = 2944
Score = 29.1 bits (62), Expect = 2.0
Identities = 20/79 (25%), Positives = 29/79 (36%), Gaps = 6/79 (7%)
Frame = +3
Query: 165 ATQHPQFLFTSDMAYNLETSLRVFV------EPSLESIWARQTRALPSWRARHPRWWKTV 326
AT H +F + Y+ E + F+ P + S T+ LP R R
Sbjct: 572 ATDHCRFRSMTPKEYDYELEVDGFIALLNGASPEVSSASGTSTKTLPGGRVSRKRTHDEA 631
Query: 327 KALGRLPPMWPSRKRASVW 383
+PP R+R VW
Sbjct: 632 DDSNSVPPTEFGRRRVEVW 650
>U67951-2|AAB07570.2| 302|Caenorhabditis elegans Regulator of
fusion protein 2,isoform a protein.
Length = 302
Score = 28.3 bits (60), Expect = 3.4
Identities = 14/41 (34%), Positives = 21/41 (51%)
Frame = +2
Query: 299 KTPKVVENSEGSRTTPSHVAFSKEGERLVGMPAKRQAVTNS 421
K KV EN + S+ +P H S G +G P +++T S
Sbjct: 216 KHTKVHENEKKSQLSPEHDESSDSGNASIGTPTTDESLTFS 256
>U67951-1|AAQ65207.1| 315|Caenorhabditis elegans Regulator of
fusion protein 2,isoform b protein.
Length = 315
Score = 28.3 bits (60), Expect = 3.4
Identities = 14/41 (34%), Positives = 21/41 (51%)
Frame = +2
Query: 299 KTPKVVENSEGSRTTPSHVAFSKEGERLVGMPAKRQAVTNS 421
K KV EN + S+ +P H S G +G P +++T S
Sbjct: 229 KHTKVHENEKKSQLSPEHDESSDSGNASIGTPTTDESLTFS 269
>U12965-3|AAZ32811.1| 980|Caenorhabditis elegans Hypothetical
protein F23F12.8 protein.
Length = 980
Score = 28.3 bits (60), Expect = 3.4
Identities = 17/53 (32%), Positives = 20/53 (37%), Gaps = 3/53 (5%)
Frame = +3
Query: 243 PSLESIWARQTRALPSWRARHPRW---WKTVKALGRLPPMWPSRKRASVWSEC 392
P +ES R T P W P W W TV A P + + V EC
Sbjct: 642 PDVESHMIRFTTQSPEWATPSPTWNPAWNTVTAEEETPGIPIIHSQCQVNGEC 694
>AY115477-1|AAM55473.1| 303|Caenorhabditis elegans zinc finger
protein REF-2 protein.
Length = 303
Score = 28.3 bits (60), Expect = 3.4
Identities = 14/41 (34%), Positives = 21/41 (51%)
Frame = +2
Query: 299 KTPKVVENSEGSRTTPSHVAFSKEGERLVGMPAKRQAVTNS 421
K KV EN + S+ +P H S G +G P +++T S
Sbjct: 217 KHTKVHENEKKSQLSPEHDESSDSGNASIGTPTTDESLTFS 257
>U80451-1|AAB37835.1| 591|Caenorhabditis elegans Dnaj domain
(prokaryotic heat shockprotein) protein 9 protein.
Length = 591
Score = 27.5 bits (58), Expect = 6.0
Identities = 12/33 (36%), Positives = 21/33 (63%)
Frame = -1
Query: 502 QIXHVLLHFGIVESTSDQSLRRVKRVTAIRDRL 404
Q+ + +LH I+ S + L R+K+V + +DRL
Sbjct: 244 QLQYNMLHEAIIPSIAMSMLNRIKKVYSEKDRL 276
>U51993-3|AAB36853.2| 958|Caenorhabditis elegans Hypothetical
protein F56F10.4 protein.
Length = 958
Score = 27.5 bits (58), Expect = 6.0
Identities = 12/40 (30%), Positives = 19/40 (47%)
Frame = -1
Query: 391 HSDQTLALFREGHMGGSRPRAFTVFHHLGCLALHDGNARV 272
H+ + A+F EG+ GG +H GC+ + N V
Sbjct: 19 HAIEQYAVFDEGNRGGFTSDVVAFDYHNGCVVIGSKNGEV 58
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,875,551
Number of Sequences: 27780
Number of extensions: 255307
Number of successful extensions: 694
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 646
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 682
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 985905834
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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