Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P16_F_K03
(742 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC23C11.08 |php3||CCAAT-binding factor complex subunit Php3 |S... 136 4e-33
SPBC30D10.02 |||transcription corepressor |Schizosaccharomyces p... 59 6e-10
SPBC3D6.09 |dpb4||DNA polymerase epsilon subunit Dpb4 |Schizosac... 50 5e-07
SPBC16G5.16 |||transcription factor zf-fungal binuclear cluster ... 31 0.23
SPBC660.11 |tcg1|mug187|single-stranded telomeric binding protei... 27 3.7
SPAC17A5.07c |ulp2||SUMO deconjugating cysteine peptidase Ulp2 |... 26 4.9
SPBC16G5.15c |fkh2||fork head transcription factor Fkh2 |Schizos... 26 6.5
SPAC9G1.02 |wis4|wak1, wik1|MAP kinase kinase kinase Wis4|Schizo... 26 6.5
SPBP16F5.03c |||phosphatidylinositol kinase |Schizosaccharomyces... 25 8.6
SPBP8B7.11 |nxt3||ubiquitin protease cofactor |Schizosaccharomyc... 25 8.6
SPBC1347.09 |||hexaprenyldihydroxybenzoate methyltransferase|Sch... 25 8.6
>SPAC23C11.08 |php3||CCAAT-binding factor complex subunit Php3
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 116
Score = 136 bits (328), Expect = 4e-33
Identities = 60/85 (70%), Positives = 75/85 (88%)
Frame = +1
Query: 415 LPIANIAKIMKRAIPENGKIAKDARECVQECISEFISFVTSEASDRCKVEKRKTINGEDV 594
LPIAN+A+IMK A+PEN KI+K+A++CVQ+C+SEFISFVT EAS++C EKRKTI GEDV
Sbjct: 12 LPIANVARIMKSALPENAKISKEAKDCVQDCVSEFISFVTGEASEQCTQEKRKTITGEDV 71
Query: 595 LFALNTLGFDNYVKPLRLYLTKYRE 669
L ALNTLGF+NY + L++ LTKYRE
Sbjct: 72 LLALNTLGFENYAEVLKISLTKYRE 96
>SPBC30D10.02 |||transcription corepressor |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 161
Score = 59.3 bits (137), Expect = 6e-10
Identities = 29/83 (34%), Positives = 47/83 (56%)
Frame = +1
Query: 385 NAPLREQDRFLPIANIAKIMKRAIPENGKIAKDARECVQECISEFISFVTSEASDRCKVE 564
N + + LP A + K++ +P + K+AR+ + EC EFI V+SEA++ C+ E
Sbjct: 2 NDGFADDELSLPKATVQKMVSDILPVDLTFTKEARDLLIECCVEFIHLVSSEANEICEKE 61
Query: 565 KRKTINGEDVLFALNTLGFDNYV 633
+KTI E ++ AL L F Y+
Sbjct: 62 AKKTIAAEHIIKALENLEFKEYI 84
>SPBC3D6.09 |dpb4||DNA polymerase epsilon subunit Dpb4
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 210
Score = 49.6 bits (113), Expect = 5e-07
Identities = 27/95 (28%), Positives = 49/95 (51%)
Frame = +1
Query: 379 KSNAPLREQDRFLPIANIAKIMKRAIPENGKIAKDARECVQECISEFISFVTSEASDRCK 558
KS D LP + I +++K +PE + K+A + + + F+SF+TS + +
Sbjct: 5 KSKETSELDDLALPRSIIMRLVKGVLPEKSLVQKEALKAMINSATLFVSFLTSASGEIAT 64
Query: 559 VEKRKTINGEDVLFALNTLGFDNYVKPLRLYLTKY 663
RK + +DVL AL+ + + + K L+ +L Y
Sbjct: 65 NNNRKILMPQDVLNALDEIEYPEFSKTLKKHLEAY 99
>SPBC16G5.16 |||transcription factor zf-fungal binuclear cluster
type |Schizosaccharomyces pombe|chr 2|||Manual
Length = 827
Score = 30.7 bits (66), Expect = 0.23
Identities = 17/38 (44%), Positives = 21/38 (55%)
Frame = -2
Query: 150 YSRMKEVPXFFESFVQIIKKELKFSPETTLIFIYLFTH 37
Y +M EVP F ++Q I ELKF + LIF F H
Sbjct: 460 YLKMSEVPKFSPKWIQAIILELKFR-QIELIFYRPFIH 496
>SPBC660.11 |tcg1|mug187|single-stranded telomeric binding protein
Tgc1 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 348
Score = 26.6 bits (56), Expect = 3.7
Identities = 13/38 (34%), Positives = 18/38 (47%)
Frame = +1
Query: 295 NGFLVADDTFVVNSDDVLEDENNSDSGSKSNAPLREQD 408
NG V D T VV S ED+ N ++ N P+ +
Sbjct: 279 NGKQVGDLTLVVKSAVFREDKQNDENEKNENEPIEASE 316
>SPAC17A5.07c |ulp2||SUMO deconjugating cysteine peptidase Ulp2
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 652
Score = 26.2 bits (55), Expect = 4.9
Identities = 11/33 (33%), Positives = 13/33 (39%)
Frame = -1
Query: 379 YSQSPSCFHLLTHHQN*QQMCHPLPKIHCPISL 281
Y P C TH N +P IH P+ L
Sbjct: 127 YDPRPGCLKFTTHEINVSYTDTSIPVIHIPVQL 159
>SPBC16G5.15c |fkh2||fork head transcription factor Fkh2
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 642
Score = 25.8 bits (54), Expect = 6.5
Identities = 13/31 (41%), Positives = 19/31 (61%)
Frame = -3
Query: 605 NANNTSSPLMVLRFSTLHLSLASLVTNDMNS 513
N+N+ SSP+ V R STL + A+ +M S
Sbjct: 529 NSNSKSSPVAVQRVSTLPQASANKQAKEMES 559
>SPAC9G1.02 |wis4|wak1, wik1|MAP kinase kinase kinase
Wis4|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1401
Score = 25.8 bits (54), Expect = 6.5
Identities = 13/42 (30%), Positives = 24/42 (57%), Gaps = 1/42 (2%)
Frame = +1
Query: 385 NAPLREQDRFLPIA-NIAKIMKRAIPENGKIAKDARECVQEC 507
+ P E D I ++A + +IP+N KI+ AR+ +++C
Sbjct: 1245 STPWSEMDNEWAIMYHVAAMHTPSIPQNEKISSLARDFIEQC 1286
>SPBP16F5.03c |||phosphatidylinositol kinase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 3699
Score = 25.4 bits (53), Expect = 8.6
Identities = 14/34 (41%), Positives = 19/34 (55%)
Frame = -3
Query: 590 SSPLMVLRFSTLHLSLASLVTNDMNSDIHS*THS 489
SS L LR + LHL ASLV + + H+ T +
Sbjct: 1366 SSSLRKLRATCLHLLFASLVAHKFDQPQHAQTRT 1399
>SPBP8B7.11 |nxt3||ubiquitin protease cofactor |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 434
Score = 25.4 bits (53), Expect = 8.6
Identities = 12/34 (35%), Positives = 18/34 (52%)
Frame = +1
Query: 280 LVRLDNGFLVADDTFVVNSDDVLEDENNSDSGSK 381
L NG+ V +D F +DV E+E + D+ K
Sbjct: 118 LAEQPNGYFVLNDIFRFLREDVEEEEESPDAVEK 151
>SPBC1347.09 |||hexaprenyldihydroxybenzoate
methyltransferase|Schizosaccharomyces pombe|chr
2|||Manual
Length = 284
Score = 25.4 bits (53), Expect = 8.6
Identities = 11/30 (36%), Positives = 19/30 (63%)
Frame = +1
Query: 328 VNSDDVLEDENNSDSGSKSNAPLREQDRFL 417
V S +L+ E+NS++ + + P +QDR L
Sbjct: 31 VISSKILQFEDNSETSLRHDLPKYDQDRLL 60
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,882,004
Number of Sequences: 5004
Number of extensions: 59215
Number of successful extensions: 168
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 161
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 167
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 351258950
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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