Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P16_F_K02
(786 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
08_02_0958 - 23044708-23046045,23046131-23046363,23047059-230471... 208 5e-54
08_02_0956 + 23026108-23027146,23027255-23027395,23029334-230295... 208 5e-54
02_05_0889 - 32532495-32533832,32533919-32534151,32534321-325344... 192 4e-49
01_01_0520 - 3819479-3819535,3819867-3819935,3820127-3820240,382... 138 5e-33
01_06_1120 - 34645676-34645768,34645880-34645966,34646443-346465... 138 6e-33
05_05_0291 + 23882579-23882660,23883073-23883214,23883310-238834... 123 2e-28
03_06_0206 - 32353308-32353566,32353784-32354024,32354408-323546... 37 0.021
07_01_0347 - 2509229-2509487,2509682-2509922,2510292-2510511,251... 34 0.11
03_03_0146 - 14835236-14835445,14835525-14835714,14836740-14837269 29 4.2
06_01_0438 + 3110703-3111945,3112486-3113057 29 5.5
02_01_0370 + 2659704-2660012,2660318-2660488,2660981-2661058,266... 29 5.5
12_02_0339 - 17721664-17722407,17722921-17723556 28 7.3
01_01_0127 + 1164871-1165346,1165835-1165934,1166007-1166102,116... 28 7.3
05_04_0298 + 19954904-19954985,19955075-19955888,19955962-19956922 28 9.7
04_04_0014 + 22158441-22158669,22158782-22158878,22159264-221594... 28 9.7
>08_02_0958 - 23044708-23046045,23046131-23046363,23047059-23047199,
23047296-23048334
Length = 916
Score = 208 bits (507), Expect = 5e-54
Identities = 93/197 (47%), Positives = 140/197 (71%), Gaps = 4/197 (2%)
Frame = +2
Query: 14 EDKGYVDLVIKVYFKNVHPKFPEGGKLSQYLNNMKINDTIDVRGPSGRLQYTGNGTFLIK 193
++ G+ DL+IKVYFKN HPKFP+GG ++QYL+++ + IDV+GP G ++YTG G F+I
Sbjct: 717 DEVGHFDLLIKVYFKNEHPKFPDGGLMTQYLDSLPVGAYIDVKGPLGHVEYTGRGEFVIN 776
Query: 194 KLRKDPPTKVVVKKLNLIAGGTGIAPMLQLVRHICTD-VNDRTELKLLFANQSEDDILLR 370
++ ++L +IAGG+GI PM Q+++ + D D TE+ L++AN++EDDILLR
Sbjct: 777 GKPRN------ARRLAMIAGGSGITPMYQVIQSVLRDQPEDTTEMHLVYANRTEDDILLR 830
Query: 371 DELERYQREHPSQFQVWYTID---RPTDGWKYSSGFINDEMIRDHLFPPSNDVLVLMCGP 541
DEL+R+ E+P + +VWY ID RP +GWKY GF+ +E++R+H+ +D L L CGP
Sbjct: 831 DELDRWAAEYPDRLKVWYVIDQVKRPEEGWKYGVGFVTEEVLREHVPEGGDDTLALACGP 890
Query: 542 PPMINFACNPALDKLGF 592
PPMI FA +P L+K+ +
Sbjct: 891 PPMIKFAVSPNLEKMKY 907
>08_02_0956 + 23026108-23027146,23027255-23027395,23029334-23029566,
23029652-23030989
Length = 916
Score = 208 bits (507), Expect = 5e-54
Identities = 93/197 (47%), Positives = 140/197 (71%), Gaps = 4/197 (2%)
Frame = +2
Query: 14 EDKGYVDLVIKVYFKNVHPKFPEGGKLSQYLNNMKINDTIDVRGPSGRLQYTGNGTFLIK 193
++ G+ DL+IKVYFKN HPKFP+GG ++QYL+++ + IDV+GP G ++YTG G F+I
Sbjct: 717 DEVGHFDLLIKVYFKNEHPKFPDGGLMTQYLDSLPVGAYIDVKGPLGHVEYTGRGEFVIN 776
Query: 194 KLRKDPPTKVVVKKLNLIAGGTGIAPMLQLVRHICTD-VNDRTELKLLFANQSEDDILLR 370
++ ++L +IAGG+GI PM Q+++ + D D TE+ L++AN++EDDILLR
Sbjct: 777 GKPRN------ARRLAMIAGGSGITPMYQVIQSVLRDQPEDTTEMHLVYANRTEDDILLR 830
Query: 371 DELERYQREHPSQFQVWYTID---RPTDGWKYSSGFINDEMIRDHLFPPSNDVLVLMCGP 541
DEL+R+ E+P + +VWY ID RP +GWKY GF+ +E++R+H+ +D L L CGP
Sbjct: 831 DELDRWAAEYPDRLKVWYVIDQVKRPEEGWKYGVGFVTEEVLREHVPEGGDDTLALACGP 890
Query: 542 PPMINFACNPALDKLGF 592
PPMI FA +P L+K+ +
Sbjct: 891 PPMIKFAVSPNLEKMKY 907
>02_05_0889 - 32532495-32533832,32533919-32534151,32534321-32534461,
32534564-32535521
Length = 889
Score = 192 bits (467), Expect = 4e-49
Identities = 82/204 (40%), Positives = 137/204 (67%), Gaps = 4/204 (1%)
Frame = +2
Query: 5 SSDEDKGYVDLVIKVYFKNVHPKFPEGGKLSQYLNNMKINDTIDVRGPSGRLQYTGNGTF 184
SS ++ GY++L+IK+YFK PKFP+GG +SQYL+ + + TID++GP G ++Y G G F
Sbjct: 687 SSVDEVGYIELLIKIYFKGEDPKFPDGGLMSQYLDYLPLGATIDIKGPIGHIEYAGRGAF 746
Query: 185 LIKKLRKDPPTKVVVKKLNLIAGGTGIAPMLQLVRHICTD-VNDRTELKLLFANQSEDDI 361
+ R+ ++L ++AGGTGI P+ Q+++ + D +D TE+ +++AN++EDD+
Sbjct: 747 TVNGERR------FARRLAMVAGGTGITPVYQVIQAVLWDQPDDGTEMHVVYANRTEDDM 800
Query: 362 LLRDELERYQREHPSQFQVWYTID---RPTDGWKYSSGFINDEMIRDHLFPPSNDVLVLM 532
LLR+E++R+ HP++ +VWY + RP DGW+Y G +++ +R+HL P + L L+
Sbjct: 801 LLREEIDRWAAAHPARLKVWYVVSKVARPEDGWEYGVGRVDERTLREHLPPGDGETLALV 860
Query: 533 CGPPPMINFACNPALDKLGFKPDQ 604
CGPP M+ P L+K+G+ D+
Sbjct: 861 CGPPAMVECTVRPGLEKMGYDLDK 884
>01_01_0520 -
3819479-3819535,3819867-3819935,3820127-3820240,
3820330-3820419,3820666-3820743,3820885-3820936,
3821021-3821091,3821216-3821270,3821889-3821948,
3822367-3822442,3823108-3823150,3823230-3823349
Length = 294
Score = 138 bits (334), Expect = 5e-33
Identities = 77/185 (41%), Positives = 116/185 (62%)
Frame = +2
Query: 2 VSSDEDKGYVDLVIKVYFKNVHPKFPEGGKLSQYLNNMKINDTIDVRGPSGRLQYTGNGT 181
+S + KGY DL+IKVY P+G K+SQY ++K D ++V+GP
Sbjct: 104 ISDPDSKGYFDLLIKVY--------PDG-KMSQYFASLKPGDVVEVKGP----------- 143
Query: 182 FLIKKLRKDPPTKVVVKKLNLIAGGTGIAPMLQLVRHICTDVNDRTELKLLFANQSEDDI 361
I+KLR P K K++ +IAGGTGI PMLQ+VR I + +D T++ L++AN S DDI
Sbjct: 144 --IEKLRYSPNMK---KQIGMIAGGTGITPMLQVVRAILKNPDDNTQVSLIYANVSPDDI 198
Query: 362 LLRDELERYQREHPSQFQVWYTIDRPTDGWKYSSGFINDEMIRDHLFPPSNDVLVLMCGP 541
LL+ EL+R +P+ F+V+YT+D+P++ W+ G+I+ ++ L P D L+L+CGP
Sbjct: 199 LLKRELDRLASSYPN-FKVFYTVDKPSNDWRGGVGYISKDIALKGLPRPGEDSLILVCGP 257
Query: 542 PPMIN 556
P M+N
Sbjct: 258 PGMMN 262
>01_06_1120 -
34645676-34645768,34645880-34645966,34646443-34646508,
34647126-34647215,34647317-34647397,34647598-34647675,
34647788-34647878,34647969-34648110,34648479-34648590
Length = 279
Score = 138 bits (333), Expect = 6e-33
Identities = 71/202 (35%), Positives = 118/202 (58%)
Frame = +2
Query: 11 DEDKGYVDLVIKVYFKNVHPKFPEGGKLSQYLNNMKINDTIDVRGPSGRLQYTGNGTFLI 190
D D G+ +LVIK+Y P+G ++S + MK+ D + V+GP GR +Y
Sbjct: 104 DSDLGHFELVIKMY--------PQG-RMSHHFREMKVGDYMSVKGPKGRFRYQVGQ---- 150
Query: 191 KKLRKDPPTKVVVKKLNLIAGGTGIAPMLQLVRHICTDVNDRTELKLLFANQSEDDILLR 370
V+ ++AGG+GI PM Q+ R I + ND T++ L++AN + DDILL+
Sbjct: 151 ------------VRAFGMLAGGSGITPMFQVARAILENPNDITKVHLVYANVTHDDILLK 198
Query: 371 DELERYQREHPSQFQVWYTIDRPTDGWKYSSGFINDEMIRDHLFPPSNDVLVLMCGPPPM 550
+EL+ + +P +F+++Y +++P + W GF++ +MI+ HL P+ D+ +L CGPPPM
Sbjct: 199 EELDNMAKTYPDRFKIYYVLNQPPEVWNGGVGFVSQDMIKAHLPAPAEDIQILRCGPPPM 258
Query: 551 INFACNPALDKLGFKPDQRFAY 616
N A LD+LG+ + +F +
Sbjct: 259 -NKAMAAHLDELGYTKEMQFQF 279
>05_05_0291 +
23882579-23882660,23883073-23883214,23883310-23883400,
23883555-23883632,23883764-23883844,23883934-23884023,
23884658-23884723,23884883-23884987,23885127-23885219
Length = 275
Score = 123 bits (296), Expect = 2e-28
Identities = 71/208 (34%), Positives = 117/208 (56%), Gaps = 6/208 (2%)
Frame = +2
Query: 11 DEDKGYVDLVIKVYFKNVHPKFPEGGKLSQYLNNMKINDTIDVRGPSGRLQYTGNGTFLI 190
D D G +LVIK+Y P+G ++S + + MK+ D + VRGP GR +Y
Sbjct: 94 DSDLGRFELVIKMY--------PQG-RMSHHFHEMKVGDYLSVRGPKGRFKYQ------- 137
Query: 191 KKLRKDPPTKVVVKKLNLIAGGTGIAPMLQLVRHICTDVNDRTELKLLFANQSEDDILLR 370
P +V + ++AGG+GI PM Q+ R I + +D T++ L++AN + DDILL+
Sbjct: 138 -------PGQV--RAFGMLAGGSGITPMFQVTRAILENPSDNTKVHLIYANVTYDDILLK 188
Query: 371 DELERYQREHPSQFQVWYTI------DRPTDGWKYSSGFINDEMIRDHLFPPSNDVLVLM 532
+EL+ +P +F+++Y + ++P + W GF++ EMI+ H P+ D+ +L
Sbjct: 189 EELDSMVETYPDRFKIYYVLNQLCFHEQPPEIWNGGVGFVSMEMIQTHCPAPAADIQILR 248
Query: 533 CGPPPMINFACNPALDKLGFKPDQRFAY 616
CGPPPM N A L+ LG+ + +F +
Sbjct: 249 CGPPPM-NKAMAEHLENLGYTKEMQFQF 275
>03_06_0206 -
32353308-32353566,32353784-32354024,32354408-32354627,
32354981-32355316,32355632-32355688,32355787-32355810
Length = 378
Score = 36.7 bits (81), Expect = 0.021
Identities = 35/139 (25%), Positives = 58/139 (41%), Gaps = 4/139 (2%)
Frame = +2
Query: 80 EGGKLSQYLNNMKINDTIDVRGPSGRLQYTGNGTFLIKKLRKDPPTKVVVKKLNLIAGGT 259
+ G S +L N K D + V GPSG+ I L ++ P + +IA GT
Sbjct: 192 KNGVCSNFLCNSKPGDKVKVTGPSGK----------IMLLPEEDPNATHI----MIATGT 237
Query: 260 GIAPMLQLVRHICTDVNDRTE---LKLLFANQSEDDILLRD-ELERYQREHPSQFQVWYT 427
G+AP +R + + + L LF + D LL D E Y +++P F+
Sbjct: 238 GVAPFRGYLRRMFMEDVPKYRFGGLAWLFLGVANTDSLLYDEEFTSYLKQYPDNFRYDKA 297
Query: 428 IDRPTDGWKYSSGFINDEM 484
+ R ++ D++
Sbjct: 298 LSREQKNKNAGKMYVQDKI 316
>07_01_0347 -
2509229-2509487,2509682-2509922,2510292-2510511,
2510943-2511278,2512047-2512103,2512187-2512210
Length = 378
Score = 34.3 bits (75), Expect = 0.11
Identities = 36/137 (26%), Positives = 57/137 (41%), Gaps = 4/137 (2%)
Frame = +2
Query: 86 GKLSQYLNNMKINDTIDVRGPSGRLQYTGNGTFLIKKLRKDPPTKVVVKKLNLIAGGTGI 265
G S +L + K D + + GPSG+ I L +D P + +IA GTG+
Sbjct: 194 GICSNFLCDSKPGDKVQITGPSGK----------IMLLPEDDPNATHI----MIATGTGV 239
Query: 266 APMLQLVRHI-CTDVNDRT--ELKLLFANQSEDDILLRD-ELERYQREHPSQFQVWYTID 433
AP +R + DV L LF + D LL D E Y +++P F+ +
Sbjct: 240 APYRGYLRRMFMEDVPSFKFGGLAWLFLGVANTDSLLYDEEFTNYLQQYPDNFRYDKALS 299
Query: 434 RPTDGWKYSSGFINDEM 484
R ++ D++
Sbjct: 300 REQKNKNGGKMYVQDKI 316
>03_03_0146 - 14835236-14835445,14835525-14835714,14836740-14837269
Length = 309
Score = 29.1 bits (62), Expect = 4.2
Identities = 18/44 (40%), Positives = 25/44 (56%), Gaps = 5/44 (11%)
Frame = +2
Query: 341 NQSEDDILLRDELER---YQREHPSQFQVWYTIDR--PTDGWKY 457
+Q EDDILL+ E ER + ++ + F + R P DGWKY
Sbjct: 219 SQREDDILLQ-EFERRIAFSKQQIASFIKTHIFSRRRPIDGWKY 261
>06_01_0438 + 3110703-3111945,3112486-3113057
Length = 604
Score = 28.7 bits (61), Expect = 5.5
Identities = 12/29 (41%), Positives = 17/29 (58%)
Frame = +2
Query: 485 IRDHLFPPSNDVLVLMCGPPPMINFACNP 571
+ D PP+ D L + PPP+I+F C P
Sbjct: 28 VTDEELPPTRD-LAMSKQPPPLISFLCLP 55
>02_01_0370 +
2659704-2660012,2660318-2660488,2660981-2661058,
2661658-2661803,2662001-2662112,2662280-2662405,
2662618-2662731
Length = 351
Score = 28.7 bits (61), Expect = 5.5
Identities = 13/49 (26%), Positives = 24/49 (48%), Gaps = 2/49 (4%)
Frame = -3
Query: 595 LKA*FI*SWVASE--VDHRRWTAHQY*NIVGRRKQMVADHFIVDETGAV 455
LK F W + + H++W +HQ+ N + Q ++D + + G V
Sbjct: 198 LKVIFFQEWAHQQYVLKHQQWASHQWGNFYYYKMQTISDIYFIGGFGTV 246
>12_02_0339 - 17721664-17722407,17722921-17723556
Length = 459
Score = 28.3 bits (60), Expect = 7.3
Identities = 12/33 (36%), Positives = 17/33 (51%)
Frame = +1
Query: 196 IKKRSAYKSCRQEIELDCRRYWHSSNASAGPTY 294
++ RSA +E+ CRR WH A+ TY
Sbjct: 390 LEPRSALDGVHREVNAYCRRRWHRWRANLVHTY 422
>01_01_0127 +
1164871-1165346,1165835-1165934,1166007-1166102,
1166182-1166265,1166809-1166871
Length = 272
Score = 28.3 bits (60), Expect = 7.3
Identities = 17/77 (22%), Positives = 37/77 (48%)
Frame = +2
Query: 242 LIAGGTGIAPMLQLVRHICTDVNDRTELKLLFANQSEDDILLRDELERYQREHPSQFQVW 421
+ A G+GI+P+ L+ + N+ ++KL + ++ + + ER+ S ++
Sbjct: 151 VFATGSGISPIRSLIESGFGE-NENIDVKLFYGVRNLQRMAYQ---ERFTNWESSGIKII 206
Query: 422 YTIDRPTDGWKYSSGFI 472
+ RP D W G++
Sbjct: 207 PVLSRPDDQWTGERGYV 223
>05_04_0298 + 19954904-19954985,19955075-19955888,19955962-19956922
Length = 618
Score = 27.9 bits (59), Expect = 9.7
Identities = 11/28 (39%), Positives = 18/28 (64%), Gaps = 1/28 (3%)
Frame = -3
Query: 517 IVGRRKQMVADHFIVDETGAVFP-TIRW 437
+ GRR++ A H ++DE GA P ++ W
Sbjct: 437 VEGRRRRAAASHGLLDEPGATVPMSVLW 464
>04_04_0014 +
22158441-22158669,22158782-22158878,22159264-22159461,
22159907-22160141,22160383-22160710,22160798-22161068,
22161169-22161424,22161508-22161964,22162096-22162286
Length = 753
Score = 27.9 bits (59), Expect = 9.7
Identities = 16/53 (30%), Positives = 28/53 (52%), Gaps = 1/53 (1%)
Frame = +2
Query: 140 RGPSGRLQYTGNGTFLIK-KLRKDPPTKVVVKKLNLIAGGTGIAPMLQLVRHI 295
+G +G TG T ++ + P ++ + L L+AGG GI+P L ++ I
Sbjct: 424 QGRNGSESETGRITACVEGPYGHESPYHLMYENLILVAGGIGISPFLAILSDI 476
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,090,411
Number of Sequences: 37544
Number of extensions: 489412
Number of successful extensions: 1152
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 1104
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1135
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2115411120
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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